RNA–Protein interactions for RNA: ENST00000639605.1

SPIN3-225, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,331 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-225ENST00000639605 SSH3Q8TE77 659 aa16.13■□□□□ 0.17
SPIN3-225ENST00000639605 UPF3BQ9BZI7 483 aaKnown RBP16.13■□□□□ 0.17
SPIN3-225ENST00000639605 USP44Q9H0E7 712 aa16.13■□□□□ 0.17
SPIN3-225ENST00000639605 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
SPIN3-225ENST00000639605 TCHHQ07283 1943 aa16.13■□□□□ 0.17
SPIN3-225ENST00000639605 SYCE3A1L190 88 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 CUL4AQ13619 759 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 LTV1Q96GA3 475 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-225ENST00000639605 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
SPIN3-225ENST00000639605 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 TRIM6-TRIM34B2RNG4 842 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 BRD1O95696 1058 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 UBTFL1P0CB47 393 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-225ENST00000639605 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
SPIN3-225ENST00000639605 ZSCAN30Q86W11 494 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 SLIT3O75094 1523 aa16.12■□□□□ 0.17
SPIN3-225ENST00000639605 ANAPC15P60006 121 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 MAP4K4O95819 1239 aaPredicted RBP16.11■□□□□ 0.17
SPIN3-225ENST00000639605 MCM2P49736 904 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 POLA2Q14181 598 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 AKAP4Q5JQC9 854 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 NBPF6Q5VWK0 638 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 NBPF4Q96M43 638 aa16.11■□□□□ 0.17
SPIN3-225ENST00000639605 MCCP23508 829 aa16.1■□□□□ 0.17
SPIN3-225ENST00000639605 FOXD4L6Q3SYB3 417 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-225ENST00000639605 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
SPIN3-225ENST00000639605 FOXD4L3Q6VB84 417 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-225ENST00000639605 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
SPIN3-225ENST00000639605 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-225ENST00000639605 GDPD2Q9HCC8 539 aa16.09■□□□□ 0.17
SPIN3-225ENST00000639605 PSME1Q06323 249 aa16.08■□□□□ 0.17
SPIN3-225ENST00000639605 LRSAM1Q6UWE0 723 aa16.08■□□□□ 0.17
SPIN3-225ENST00000639605 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.17
SPIN3-225ENST00000639605 PI4K2BQ8TCG2 481 aa16.07■□□□□ 0.16
SPIN3-225ENST00000639605 RPAP1Q9BWH6 1393 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-225ENST00000639605 GADD45BO75293 160 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-225ENST00000639605 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
SPIN3-225ENST00000639605 MST1RQ04912 1400 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 RGPD2P0DJD1 1756 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 DTNBO60941 627 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 ESCO1Q5FWF5 840 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 RNF214Q8ND24 703 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
SPIN3-225ENST00000639605 HSP90AB4PQ58FF6 505 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 BEND3Q5T5X7 828 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 PPP1R42Q7Z4L9 355 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 ARHGEF25Q86VW2 580 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 LGR6Q9HBX8 967 aa16.06■□□□□ 0.16
SPIN3-225ENST00000639605 NBPF7P0C2Y1 421 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-225ENST00000639605 ZNF530Q6P9A1 599 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-225ENST00000639605 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
SPIN3-225ENST00000639605 NPHP4O75161 1426 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-225ENST00000639605 KCNQ3O43525 872 aa16.05■□□□□ 0.16
SPIN3-225ENST00000639605 HSPA4P34932 840 aa16.05■□□□□ 0.16
SPIN3-225ENST00000639605 TEFQ10587 303 aa16.05■□□□□ 0.16
SPIN3-225ENST00000639605 ANP32BQ92688 251 aaKnown RBP16.05■□□□□ 0.16
SPIN3-225ENST00000639605 KIF1BPQ96EK5 621 aa16.05■□□□□ 0.16
SPIN3-225ENST00000639605 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
SPIN3-225ENST00000639605 ADAMTSL3P82987 1691 aa16.04■□□□□ 0.16
SPIN3-225ENST00000639605 OFD1O75665 1012 aa16.04■□□□□ 0.16
SPIN3-225ENST00000639605 ANXA1P04083 346 aa16.04■□□□□ 0.16
SPIN3-225ENST00000639605 CHPF2Q9P2E5 772 aa16.04■□□□□ 0.16
SPIN3-225ENST00000639605 USP42Q9H9J4 1324 aaKnown RBP16.04■□□□□ 0.16
SPIN3-225ENST00000639605 BTBD11A6QL63 1104 aa16.03■□□□□ 0.16
SPIN3-225ENST00000639605 MTX1Q13505 466 aa16.03■□□□□ 0.16
SPIN3-225ENST00000639605 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
SPIN3-225ENST00000639605 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
SPIN3-225ENST00000639605 HDAC5Q9UQL6 1122 aa16.03■□□□□ 0.16
SPIN3-225ENST00000639605 RNMTO43148 476 aaKnown RBP16.03■□□□□ 0.16
SPIN3-225ENST00000639605 SURF6O75683 361 aaKnown RBP16.03■□□□□ 0.16
SPIN3-225ENST00000639605 ALDH1L1O75891 902 aa16.03■□□□□ 0.16
SPIN3-225ENST00000639605 XPCQ01831 940 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-225ENST00000639605 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
SPIN3-225ENST00000639605 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
SPIN3-225ENST00000639605 GCP02774 474 aa16.02■□□□□ 0.16
SPIN3-225ENST00000639605 MSNP26038 577 aaKnown RBP16.02■□□□□ 0.16
SPIN3-225ENST00000639605 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
SPIN3-225ENST00000639605 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-225ENST00000639605 ADCY9O60503 1353 aa16.02■□□□□ 0.16
SPIN3-225ENST00000639605 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-225ENST00000639605 KIF1AQ12756 1690 aa16.02■□□□□ 0.16
SPIN3-225ENST00000639605 CPA1P15085 419 aa16.02■□□□□ 0.15
SPIN3-225ENST00000639605 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.15
SPIN3-225ENST00000639605 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.15
SPIN3-225ENST00000639605 RAD50Q92878 1312 aa16.02■□□□□ 0.15
SPIN3-225ENST00000639605 SGSM2O43147 1006 aa16.01■□□□□ 0.15
SPIN3-225ENST00000639605 TTC14Q96N46 770 aa16.01■□□□□ 0.15
SPIN3-225ENST00000639605 LSG1Q9H089 658 aaKnown RBP16.01■□□□□ 0.15
SPIN3-225ENST00000639605 SNX14Q9Y5W7 946 aa16.01■□□□□ 0.15
SPIN3-225ENST00000639605 PI4KAP2A4QPH2 592 aa16.01■□□□□ 0.15
SPIN3-225ENST00000639605 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
SPIN3-225ENST00000639605 MBD3O95983 291 aa16.01■□□□□ 0.15
SPIN3-225ENST00000639605 HSP90AA2PQ14568 343 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-225ENST00000639605 PI4KAP1Q8N8J0 262 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms