RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FOXD4L5Q5VV16 416 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-221ENST00000638141 SPC24Q8NBT2 197 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 FOXD4L4Q8WXT5 416 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-221ENST00000638141 ERBB3P21860 1342 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 LMTK2Q8IWU2 1503 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 MROH2AA6NES4 1674 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 ATP8B1O43520 1251 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 SDSP20132 328 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 CDC25BP30305 580 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 NEK4P51957 841 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 GTF2A1P52655 376 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-221ENST00000638141 CWC15Q9P013 229 aaKnown RBP14.29□□□□□ -0.12
CAPN3-221ENST00000638141 FHOD1Q9Y613 1164 aa14.29□□□□□ -0.12
CAPN3-221ENST00000638141 V9GYY5 206 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-221ENST00000638141 SLU7O95391 586 aaKnown RBP14.28□□□□□ -0.12
CAPN3-221ENST00000638141 CCDC186Q7Z3E2 898 aa14.28□□□□□ -0.12
CAPN3-221ENST00000638141 PLA2G4DQ86XP0 818 aa14.28□□□□□ -0.12
CAPN3-221ENST00000638141 SLC26A8Q96RN1 970 aa14.28□□□□□ -0.12
CAPN3-221ENST00000638141 ELP1O95163 1332 aa14.28□□□□□ -0.12
CAPN3-221ENST00000638141 AATKQ6ZMQ8 1374 aa14.28□□□□□ -0.12
CAPN3-221ENST00000638141 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
CAPN3-221ENST00000638141 GUCY2CP25092 1073 aa14.27□□□□□ -0.12
CAPN3-221ENST00000638141 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.12
CAPN3-221ENST00000638141 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.12
CAPN3-221ENST00000638141 ATG3Q9NT62 314 aa14.27□□□□□ -0.12
CAPN3-221ENST00000638141 POLKQ9UBT6 870 aa14.27□□□□□ -0.12
CAPN3-221ENST00000638141 ATP6V1DQ9Y5K8 247 aa14.27□□□□□ -0.12
CAPN3-221ENST00000638141 NPATQ14207 1427 aa14.27□□□□□ -0.12
CAPN3-221ENST00000638141 SRCIN1Q9C0H9 1055 aa14.27□□□□□ -0.13
CAPN3-221ENST00000638141 OSBPL3Q9H4L5 887 aa14.27□□□□□ -0.13
CAPN3-221ENST00000638141 ADGRB3O60242 1522 aa14.27□□□□□ -0.13
CAPN3-221ENST00000638141 EFCAB6Q5THR3 1501 aa14.27□□□□□ -0.13
CAPN3-221ENST00000638141 MYO1CO00159 1063 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 ANKRD44Q8N8A2 993 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 IQUBQ8NA54 791 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 NFATC2IPQ8NCF5 419 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 UBXN6Q9BZV1 441 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 GDPD2Q9HCC8 539 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 ST7Q9NRC1 585 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 ZFYVE9O95405 1425 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 GPS2Q13227 327 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 ELF2Q15723 593 aa14.26□□□□□ -0.13
CAPN3-221ENST00000638141 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.13
CAPN3-221ENST00000638141 VAMP4O75379 141 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 PNPLA6Q8IY17 1366 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 PNMA6AP0CW24 399 aaPredicted RBP14.25□□□□□ -0.13
CAPN3-221ENST00000638141 PLA2G4AP47712 749 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 ZNF75DP51815 510 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 HAP1P54257 671 aaPredicted RBP14.25□□□□□ -0.13
CAPN3-221ENST00000638141 SYT10Q6XYQ8 523 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 GOLGA6L1Q8N7Z2 621 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 SIRT1Q96EB6 747 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 L2HGDHQ9H9P8 463 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 PSD3Q9NYI0 1048 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 ATP10DQ9P241 1426 aa14.25□□□□□ -0.13
CAPN3-221ENST00000638141 ZRANB2O95218 330 aaKnown RBP eCLIP14.24□□□□□ -0.13
CAPN3-221ENST00000638141 ZSCAN22P10073 491 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-221ENST00000638141 LRMPQ12912 555 aa14.24□□□□□ -0.13
CAPN3-221ENST00000638141 GIMAP6Q6P9H5 292 aa14.24□□□□□ -0.13
CAPN3-221ENST00000638141 U2SURPO15042 1029 aaKnown RBP14.24□□□□□ -0.13
CAPN3-221ENST00000638141 PPLO60437 1756 aa14.24□□□□□ -0.13
CAPN3-221ENST00000638141 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
CAPN3-221ENST00000638141 TDRD7Q8NHU6 1098 aaKnown RBP14.24□□□□□ -0.13
CAPN3-221ENST00000638141 TRERF1Q96PN7 1200 aa14.24□□□□□ -0.13
CAPN3-221ENST00000638141 CNPY2Q9Y2B0 182 aa14.24□□□□□ -0.13
CAPN3-221ENST00000638141 FCHSD2O94868 740 aa14.23□□□□□ -0.13
CAPN3-221ENST00000638141 TUBB4AP04350 444 aa14.23□□□□□ -0.13
CAPN3-221ENST00000638141 GNAI1P63096 354 aa14.23□□□□□ -0.13
CAPN3-221ENST00000638141 C1orf115Q9H7X2 142 aa14.23□□□□□ -0.13
CAPN3-221ENST00000638141 LRRC7Q96NW7 1537 aa14.23□□□□□ -0.13
CAPN3-221ENST00000638141 SLC52A1Q9NWF4 448 aa14.23□□□□□ -0.13
CAPN3-221ENST00000638141 TULP4Q9NRJ4 1543 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 EVC2Q86UK5 1308 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 SRLQ86TD4 932 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 GOLGA5Q8TBA6 731 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 PREX1Q8TCU6 1659 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 CAVIN2O95810 425 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 ZSCAN26Q16670 478 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 FBXO18Q8NFZ0 1043 aa14.22□□□□□ -0.13
CAPN3-221ENST00000638141 CACTINQ8WUQ7 758 aaKnown RBP14.22□□□□□ -0.13
CAPN3-221ENST00000638141 RTF1Q92541 710 aaKnown RBP14.22□□□□□ -0.13
CAPN3-221ENST00000638141 PLEKHG2Q9H7P9 1386 aa14.21□□□□□ -0.13
CAPN3-221ENST00000638141 A0A1B0GUL7 405 aa14.21□□□□□ -0.13
CAPN3-221ENST00000638141 CLCN6P51797 869 aa14.21□□□□□ -0.13
CAPN3-221ENST00000638141 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
CAPN3-221ENST00000638141 ARHGEF28Q8N1W1 1705 aaKnown RBP14.21□□□□□ -0.14
CAPN3-221ENST00000638141 LOC102724159A0A0B4J2E5 919 aa14.2□□□□□ -0.14
CAPN3-221ENST00000638141 PWP2Q15269 919 aaKnown RBP14.2□□□□□ -0.14
CAPN3-221ENST00000638141 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
CAPN3-221ENST00000638141 ARGLU1Q9NWB6 273 aaPredicted RBP14.2□□□□□ -0.14
CAPN3-221ENST00000638141 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
CAPN3-221ENST00000638141 F13A1P00488 732 aa14.2□□□□□ -0.14
CAPN3-221ENST00000638141 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
CAPN3-221ENST00000638141 SARM1Q6SZW1 724 aa14.2□□□□□ -0.14
CAPN3-221ENST00000638141 RBM43Q6ZSC3 357 aaKnown RBP14.2□□□□□ -0.14
CAPN3-221ENST00000638141 FILIP1Q7Z7B0 1213 aa14.2□□□□□ -0.14
CAPN3-221ENST00000638141 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms