RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
CACNA1A-248ENST00000637774 CYP27B1O15528 508 aa11.87□□□□□ -0.51
CACNA1A-248ENST00000637774 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-248ENST00000637774 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-248ENST00000637774 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-248ENST00000637774 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 G3BP1Q13283 466 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 KSR2Q6VAB6 950 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 KLHDC4Q8TBB5 520 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 SPATA31A3Q5VYP0 1347 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 KCNJ4P48050 445 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 ZBTB3Q9H5J0 574 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
CACNA1A-248ENST00000637774 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 REC8O95072 547 aa11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 BABAM1Q9NWV8 329 aa11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 BTG4Q9NY30 223 aa11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 XRN1Q8IZH2 1706 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 SNRPA1P09661 255 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 BEND3Q5T5X7 828 aa11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 CCDC8Q9H0W5 538 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-248ENST00000637774 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
CACNA1A-248ENST00000637774 UBE3BQ7Z3V4 1068 aa11.84□□□□□ -0.51
CACNA1A-248ENST00000637774 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-248ENST00000637774 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
CACNA1A-248ENST00000637774 KIAA1211Q6ZU35 1233 aa11.84□□□□□ -0.51
CACNA1A-248ENST00000637774 AACSQ86V21 672 aa11.84□□□□□ -0.51
CACNA1A-248ENST00000637774 ERC2O15083 957 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 A1BGP04217 495 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 FOXD4L6Q3SYB3 417 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 FOXD4L3Q6VB84 417 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 KIF1BPQ96EK5 621 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 GRM8O00222 908 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 IL2RBP14784 551 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 PXDNQ92626 1479 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 RGS12O14924 1447 aa11.83□□□□□ -0.52
CACNA1A-248ENST00000637774 A0A087WZG4 1122 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 FAM177BA6PVY3 158 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 MCCP23508 829 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 NEK4P51957 841 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 SOS1Q07889 1333 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 MST1RQ04912 1400 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 FMN2Q9NZ56 1722 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 CEMIPQ8WUJ3 1361 aa11.82□□□□□ -0.52
CACNA1A-248ENST00000637774 HOXB7P09629 217 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 LINS1Q8NG48 757 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 SUCLG2Q96I99 432 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 DIAPH3Q9NSV4 1193 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 CD2BP2O95400 341 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 HSP90AB4PQ58FF6 505 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 UNC5CLQ8IV45 518 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 NEUROD6Q96NK8 337 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 ST18O60284 1047 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
CACNA1A-248ENST00000637774 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-248ENST00000637774 BOLA2Q9H3K6 86 aa11.8□□□□□ -0.52
CACNA1A-248ENST00000637774 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-248ENST00000637774 ADAMTSL3P82987 1691 aa11.8□□□□□ -0.52
CACNA1A-248ENST00000637774 GSE1Q14687 1217 aa11.79□□□□□ -0.52
CACNA1A-248ENST00000637774 K7ELQ4 463 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-248ENST00000637774 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
CACNA1A-248ENST00000637774 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
CACNA1A-248ENST00000637774 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
CACNA1A-248ENST00000637774 CNTROBQ8N137 903 aa11.79□□□□□ -0.52
CACNA1A-248ENST00000637774 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
CACNA1A-248ENST00000637774 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 GPTP24298 496 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 RBM25P49756 843 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 TTLL7Q6ZT98 887 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 DNAJC2Q99543 621 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 ADCY9O60503 1353 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 DTNBO60941 627 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 RABEP1Q15276 862 aa11.78□□□□□ -0.52
CACNA1A-248ENST00000637774 NDUFB9Q9Y6M9 179 aa11.77□□□□□ -0.53
CACNA1A-248ENST00000637774 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
CACNA1A-248ENST00000637774 PCDH11XQ9BZA7 1347 aa11.77□□□□□ -0.53
CACNA1A-248ENST00000637774 PCDH11YQ9BZA8 1340 aa11.77□□□□□ -0.53
CACNA1A-248ENST00000637774 GORABQ5T7V8 394 aa11.76□□□□□ -0.53
CACNA1A-248ENST00000637774 FSD1Q9BTV5 496 aa11.76□□□□□ -0.53
CACNA1A-248ENST00000637774 IGKV5-2P06315 115 aa11.76□□□□□ -0.53
CACNA1A-248ENST00000637774 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms