RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 RBM6P78332 1123 aaKnown RBP9.28□□□□□ -0.92
SCN8A-212ENST00000636945 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 TERF2IPQ9NYB0 399 aa9.28□□□□□ -0.92
SCN8A-212ENST00000636945 STX6O43752 255 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 SYT1P21579 422 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 ZSCAN25Q6NSZ9 544 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 TIGD1Q96MW7 591 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 MRVI1Q9Y6F6 885 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 ADGRL3Q9HAR2 1447 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 ELP1O95163 1332 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 ZBTB7CA1YPR0 619 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 LMOD3Q0VAK6 560 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 DNAJC2Q99543 621 aaKnown RBP9.27□□□□□ -0.93
SCN8A-212ENST00000636945 MEIS3Q99687 375 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.27□□□□□ -0.93
SCN8A-212ENST00000636945 ITSN1Q15811 1721 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 XRN1Q8IZH2 1706 aaKnown RBP9.27□□□□□ -0.93
SCN8A-212ENST00000636945 CCDC192P0DO97 292 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
SCN8A-212ENST00000636945 KRT24Q2M2I5 525 aa9.27□□□□□ -0.93
SCN8A-212ENST00000636945 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.93
SCN8A-212ENST00000636945 TDRD7Q8NHU6 1098 aaKnown RBP9.27□□□□□ -0.93
SCN8A-212ENST00000636945 BCL11BQ9C0K0 894 aaPredicted RBP9.27□□□□□ -0.93
SCN8A-212ENST00000636945 ARHGEF10O15013 1369 aa9.26□□□□□ -0.93
SCN8A-212ENST00000636945 CYP2C19P33261 490 aa9.26□□□□□ -0.93
SCN8A-212ENST00000636945 IL25Q9H293 177 aa9.26□□□□□ -0.93
SCN8A-212ENST00000636945 ATP6V1DQ9Y5K8 247 aa9.26□□□□□ -0.93
SCN8A-212ENST00000636945 TNNT1P13805 278 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 CALCOCO1Q9P1Z2 691 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 MTMR6Q9Y217 621 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 CHL1O00533 1208 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 KCNJ4P48050 445 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 ZNF75DP51815 510 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 CCDC112Q8NEF3 446 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 ZNF446Q9NWS9 450 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 TTC21AQ8NDW8 1320 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 RAD50Q92878 1312 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 SETD1BQ9UPS6 1966 aaKnown RBP9.25□□□□□ -0.93
SCN8A-212ENST00000636945 HMMRO75330 724 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 H2AFXP16104 143 aaPredicted RBP9.25□□□□□ -0.93
SCN8A-212ENST00000636945 LRMPQ12912 555 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 RUFY3Q7L099 469 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 CCDC186Q7Z3E2 898 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 KCNB2Q92953 911 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 RGPD1P0DJD0 1748 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 C3P01024 1663 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 LMTK3Q96Q04 1460 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 TTC21BQ7Z4L5 1316 aa9.25□□□□□ -0.93
SCN8A-212ENST00000636945 HAP1P54257 671 aaPredicted RBP9.24□□□□□ -0.93
SCN8A-212ENST00000636945 SARM1Q6SZW1 724 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 ELL2O00472 640 aaPredicted RBP9.24□□□□□ -0.93
SCN8A-212ENST00000636945 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 ERO1AQ96HE7 468 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 UPF3BQ9BZI7 483 aaKnown RBP9.24□□□□□ -0.93
SCN8A-212ENST00000636945 TNRQ92752 1358 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 DLC1Q96QB1 1528 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 PDIA4P13667 645 aaKnown RBP9.24□□□□□ -0.93
SCN8A-212ENST00000636945 TYRO3Q06418 890 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 FBXO38Q6PIJ6 1188 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 CACTINQ8WUQ7 758 aaKnown RBP9.24□□□□□ -0.93
SCN8A-212ENST00000636945 C16orf45Q96MC5 204 aaPredicted RBP9.24□□□□□ -0.93
SCN8A-212ENST00000636945 TSPYL1Q9H0U9 437 aa9.24□□□□□ -0.93
SCN8A-212ENST00000636945 UBXN6Q9BZV1 441 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 CBX8Q9HC52 389 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 NRBP1Q9UHY1 535 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 LIMCH1Q9UPQ0 1083 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 SNX14Q9Y5W7 946 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 ST3GAL1Q11201 340 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 L2HGDHQ9H9P8 463 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 CRB1P82279 1406 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 CEP135Q66GS9 1140 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 UNC5CLQ8IV45 518 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 LSG1Q9H089 658 aaKnown RBP9.23□□□□□ -0.93
SCN8A-212ENST00000636945 ANO2Q9NQ90 1003 aa9.23□□□□□ -0.93
SCN8A-212ENST00000636945 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 TMEM131LA2VDJ0 1609 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 VGLL3A8MV65 326 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 NEMFO60524 1076 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 AK2P54819 239 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 DNM1Q05193 864 aaKnown RBP9.22□□□□□ -0.93
SCN8A-212ENST00000636945 ZNF215Q9UL58 517 aaPredicted RBP9.22□□□□□ -0.93
SCN8A-212ENST00000636945 FAM208AQ9UK61 1670 aaKnown RBP9.22□□□□□ -0.93
SCN8A-212ENST00000636945 MAP3K11Q16584 847 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 CCDC144BQ3MJ40 725 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 CCDC93Q567U6 631 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 RNF20Q5VTR2 975 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 LUZP1Q86V48 1076 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 AEBP1Q8IUX7 1158 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 CCDC144CPQ8IYA2 1237 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 HYPKQ9NX55 129 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 FHOD1Q9Y613 1164 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 SGSM2O43147 1006 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
SCN8A-212ENST00000636945 MUM1L1Q5H9M0 696 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
SCN8A-212ENST00000636945 LRRCC1Q9C099 1032 aa9.22□□□□□ -0.93
SCN8A-212ENST00000636945 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.22□□□□□ -0.93
SCN8A-212ENST00000636945 FIBPO43427 364 aa9.21□□□□□ -0.93
SCN8A-212ENST00000636945 CAVIN2O95810 425 aa9.21□□□□□ -0.93
SCN8A-212ENST00000636945 TTC6Q86TZ1 520 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms