RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 CHPF2Q9P2E5 772 aa17.4■□□□□ 0.38
PTBP1-221ENST00000635647 NSFL1CQ9UNZ2 370 aaKnown RBP17.4■□□□□ 0.38
PTBP1-221ENST00000635647 BTBD11A6QL63 1104 aa17.4■□□□□ 0.38
PTBP1-221ENST00000635647 GPT2Q8TD30 523 aa17.4■□□□□ 0.38
PTBP1-221ENST00000635647 CCDC8Q9H0W5 538 aaPredicted RBP17.4■□□□□ 0.38
PTBP1-221ENST00000635647 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
PTBP1-221ENST00000635647 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
PTBP1-221ENST00000635647 TMEM2Q9UHN6 1383 aa17.39■□□□□ 0.38
PTBP1-221ENST00000635647 MCM2P49736 904 aa17.39■□□□□ 0.37
PTBP1-221ENST00000635647 CLASRPQ8N2M8 674 aaKnown RBP17.39■□□□□ 0.37
PTBP1-221ENST00000635647 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.37
PTBP1-221ENST00000635647 CEBPZQ03701 1054 aaKnown RBP17.39■□□□□ 0.37
PTBP1-221ENST00000635647 CNTROBQ8N137 903 aa17.39■□□□□ 0.37
PTBP1-221ENST00000635647 TMEM63CQ9P1W3 806 aa17.39■□□□□ 0.37
PTBP1-221ENST00000635647 ATP10DQ9P241 1426 aa17.39■□□□□ 0.37
PTBP1-221ENST00000635647 G3BP1Q13283 466 aaKnown RBP eCLIP17.39■□□□□ 0.372e-9■□□□□ 9.4
PTBP1-221ENST00000635647 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
PTBP1-221ENST00000635647 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-221ENST00000635647 HOXC9P31274 260 aa17.38■□□□□ 0.37
PTBP1-221ENST00000635647 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
PTBP1-221ENST00000635647 TSC1Q92574 1164 aa17.38■□□□□ 0.37
PTBP1-221ENST00000635647 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
PTBP1-221ENST00000635647 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
PTBP1-221ENST00000635647 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
PTBP1-221ENST00000635647 MBD3O95983 291 aa17.37■□□□□ 0.37
PTBP1-221ENST00000635647 DNAJC2Q99543 621 aaKnown RBP17.37■□□□□ 0.37
PTBP1-221ENST00000635647 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
PTBP1-221ENST00000635647 KCNQ3O43525 872 aa17.37■□□□□ 0.37
PTBP1-221ENST00000635647 KCNA6P17658 529 aa17.37■□□□□ 0.37
PTBP1-221ENST00000635647 AACSQ86V21 672 aa17.37■□□□□ 0.37
PTBP1-221ENST00000635647 ZDHHC9Q9Y397 364 aa17.37■□□□□ 0.37
PTBP1-221ENST00000635647 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
PTBP1-221ENST00000635647 GPATCH3Q96I76 525 aa17.36■□□□□ 0.37
PTBP1-221ENST00000635647 KIF20BQ96Q89 1820 aa17.36■□□□□ 0.37
PTBP1-221ENST00000635647 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
PTBP1-221ENST00000635647 BOLA2Q9H3K6 86 aa17.36■□□□□ 0.37
PTBP1-221ENST00000635647 TSPY26PQ9H489 355 aa17.36■□□□□ 0.37
PTBP1-221ENST00000635647 USP6P35125 1406 aa17.36■□□□□ 0.37
PTBP1-221ENST00000635647 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
PTBP1-221ENST00000635647 CLTCQ00610 1675 aaKnown RBP17.35■□□□□ 0.37
PTBP1-221ENST00000635647 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
PTBP1-221ENST00000635647 THEMISQ8N1K5 641 aaPredicted RBP17.35■□□□□ 0.37
PTBP1-221ENST00000635647 KIF1BPQ96EK5 621 aa17.35■□□□□ 0.37
PTBP1-221ENST00000635647 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
PTBP1-221ENST00000635647 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
PTBP1-221ENST00000635647 CCDC83Q8IWF9 413 aa17.35■□□□□ 0.37
PTBP1-221ENST00000635647 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
PTBP1-221ENST00000635647 SBNO1A3KN83 1393 aa17.34■□□□□ 0.37
PTBP1-221ENST00000635647 GADD45BO75293 160 aaPredicted RBP17.34■□□□□ 0.37
PTBP1-221ENST00000635647 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
PTBP1-221ENST00000635647 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
PTBP1-221ENST00000635647 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
PTBP1-221ENST00000635647 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.37
PTBP1-221ENST00000635647 MAP7D2Q96T17 732 aa17.33■□□□□ 0.37
PTBP1-221ENST00000635647 ZKSCAN1P17029 563 aaPredicted RBP17.33■□□□□ 0.36
PTBP1-221ENST00000635647 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.36
PTBP1-221ENST00000635647 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
PTBP1-221ENST00000635647 NEXNQ0ZGT2 675 aa17.33■□□□□ 0.36
PTBP1-221ENST00000635647 TTC5Q8N0Z6 440 aa17.33■□□□□ 0.36
PTBP1-221ENST00000635647 SIRT1Q96EB6 747 aa17.33■□□□□ 0.36
PTBP1-221ENST00000635647 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.36
PTBP1-221ENST00000635647 SOS1Q07889 1333 aaPredicted RBP17.32■□□□□ 0.36
PTBP1-221ENST00000635647 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 ZNF445P59923 1031 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 SPC24Q8NBT2 197 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 PHF8Q9UPP1 1060 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 OFD1O75665 1012 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 PHF14O94880 888 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 NECAB1Q8N987 351 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 RUFY2Q8WXA3 655 aa17.32■□□□□ 0.36
PTBP1-221ENST00000635647 KLHL34Q8N239 644 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 BBXQ8WY36 941 aaPredicted RBP17.31■□□□□ 0.36
PTBP1-221ENST00000635647 IL25Q9H293 177 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 CRB1P82279 1406 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
PTBP1-221ENST00000635647 OSBPL3Q9H4L5 887 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 ATP5J2-PTCD1G3V325 749 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
PTBP1-221ENST00000635647 CHRNA2Q15822 529 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
PTBP1-221ENST00000635647 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 RGS12O14924 1447 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 HSP90AB4PQ58FF6 505 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 ZNF771Q7L3S4 317 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-221ENST00000635647 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 RICTORQ6R327 1708 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 AK2P54819 239 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 NBPF6Q5VWK0 638 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-221ENST00000635647 NBPF4Q96M43 638 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
PTBP1-221ENST00000635647 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
PTBP1-221ENST00000635647 RAB11FIP3O75154 756 aa17.29■□□□□ 0.36
PTBP1-221ENST00000635647 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
PTBP1-221ENST00000635647 USP25Q9UHP3 1055 aa17.29■□□□□ 0.36
PTBP1-221ENST00000635647 CAMK4Q16566 473 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms