RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 UBTFL1P0CB47 393 aaPredicted RBP18.49■□□□□ 0.55
LINC00552-201ENST00000625151 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
LINC00552-201ENST00000625151 LTV1Q96GA3 475 aaPredicted RBP18.49■□□□□ 0.55
LINC00552-201ENST00000625151 UPF3BQ9BZI7 483 aaKnown RBP18.49■□□□□ 0.55
LINC00552-201ENST00000625151 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
LINC00552-201ENST00000625151 SYCE3A1L190 88 aa18.49■□□□□ 0.55
LINC00552-201ENST00000625151 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
LINC00552-201ENST00000625151 LRSAM1Q6UWE0 723 aa18.48■□□□□ 0.55
LINC00552-201ENST00000625151 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
LINC00552-201ENST00000625151 ANKARQ7Z5J8 1434 aa18.48■□□□□ 0.55
LINC00552-201ENST00000625151 SSH3Q8TE77 659 aa18.48■□□□□ 0.55
LINC00552-201ENST00000625151 IL17RAQ96F46 866 aa18.48■□□□□ 0.55
LINC00552-201ENST00000625151 INTS4Q96HW7 963 aaKnown RBP18.48■□□□□ 0.55
LINC00552-201ENST00000625151 PDLIM2Q96JY6 352 aa18.48■□□□□ 0.55
LINC00552-201ENST00000625151 PODXL2Q9NZ53 605 aa18.48■□□□□ 0.55
LINC00552-201ENST00000625151 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
LINC00552-201ENST00000625151 TCHHQ07283 1943 aa18.47■□□□□ 0.55
LINC00552-201ENST00000625151 AOX1Q06278 1338 aa18.47■□□□□ 0.55
LINC00552-201ENST00000625151 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
LINC00552-201ENST00000625151 USP54Q70EL1 1684 aa18.46■□□□□ 0.55
LINC00552-201ENST00000625151 ORAI2Q96SN7 254 aa18.46■□□□□ 0.55
LINC00552-201ENST00000625151 MAP4K4O95819 1239 aaPredicted RBP18.46■□□□□ 0.55
LINC00552-201ENST00000625151 MSNP26038 577 aaKnown RBP18.46■□□□□ 0.55
LINC00552-201ENST00000625151 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
LINC00552-201ENST00000625151 TMEM94Q12767 1356 aa18.46■□□□□ 0.55
LINC00552-201ENST00000625151 MBD3O95983 291 aa18.45■□□□□ 0.54
LINC00552-201ENST00000625151 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
LINC00552-201ENST00000625151 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
LINC00552-201ENST00000625151 LTN1O94822 1766 aa18.45■□□□□ 0.54
LINC00552-201ENST00000625151 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
LINC00552-201ENST00000625151 HSPA4P34932 840 aa18.44■□□□□ 0.54
LINC00552-201ENST00000625151 POLA2Q14181 598 aa18.44■□□□□ 0.54
LINC00552-201ENST00000625151 PHF8Q9UPP1 1060 aa18.44■□□□□ 0.54
LINC00552-201ENST00000625151 PI4K2BQ8TCG2 481 aa18.44■□□□□ 0.54
LINC00552-201ENST00000625151 HS1BP3Q53T59 392 aa18.43■□□□□ 0.54
LINC00552-201ENST00000625151 ABTB2Q8N961 1025 aa18.43■□□□□ 0.54
LINC00552-201ENST00000625151 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
LINC00552-201ENST00000625151 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
LINC00552-201ENST00000625151 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
LINC00552-201ENST00000625151 RHPN1Q8TCX5 695 aa18.43■□□□□ 0.54
LINC00552-201ENST00000625151 RAB11FIP3O75154 756 aa18.42■□□□□ 0.54
LINC00552-201ENST00000625151 EIF2S2P20042 333 aaKnown RBP18.42■□□□□ 0.54
LINC00552-201ENST00000625151 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.42■□□□□ 0.54
LINC00552-201ENST00000625151 NBPF7P0C2Y1 421 aaPredicted RBP18.42■□□□□ 0.54
LINC00552-201ENST00000625151 KIAA1211Q6ZU35 1233 aa18.42■□□□□ 0.54
LINC00552-201ENST00000625151 NOL7Q9UMY1 257 aaKnown RBP18.42■□□□□ 0.54
LINC00552-201ENST00000625151 SRGAP3O43295 1099 aa18.41■□□□□ 0.54
LINC00552-201ENST00000625151 C19orf44Q9H6X5 657 aa18.41■□□□□ 0.54
LINC00552-201ENST00000625151 GDPD2Q9HCC8 539 aa18.41■□□□□ 0.54
LINC00552-201ENST00000625151 KDM3BQ7LBC6 1761 aa18.41■□□□□ 0.54
LINC00552-201ENST00000625151 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
LINC00552-201ENST00000625151 OFD1O75665 1012 aa18.41■□□□□ 0.54
LINC00552-201ENST00000625151 XPCQ01831 940 aaPredicted RBP18.41■□□□□ 0.54
LINC00552-201ENST00000625151 RAD50Q92878 1312 aa18.41■□□□□ 0.54
LINC00552-201ENST00000625151 EPB41L2O43491 1005 aaKnown RBP18.4■□□□□ 0.54
LINC00552-201ENST00000625151 RNF214Q8ND24 703 aa18.4■□□□□ 0.54
LINC00552-201ENST00000625151 MED1Q15648 1581 aaPredicted RBP18.4■□□□□ 0.54
LINC00552-201ENST00000625151 SGSM2O43147 1006 aa18.4■□□□□ 0.54
LINC00552-201ENST00000625151 GADD45BO75293 160 aaPredicted RBP18.4■□□□□ 0.54
LINC00552-201ENST00000625151 LGR6Q9HBX8 967 aa18.39■□□□□ 0.54
LINC00552-201ENST00000625151 CHPF2Q9P2E5 772 aa18.39■□□□□ 0.54
LINC00552-201ENST00000625151 CRYBG1Q9Y4K1 1723 aa18.39■□□□□ 0.54
LINC00552-201ENST00000625151 TPM2P07951 284 aa18.39■□□□□ 0.53
LINC00552-201ENST00000625151 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
LINC00552-201ENST00000625151 KIF1BPQ96EK5 621 aa18.39■□□□□ 0.53
LINC00552-201ENST00000625151 SNX14Q9Y5W7 946 aa18.39■□□□□ 0.53
LINC00552-201ENST00000625151 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
LINC00552-201ENST00000625151 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
LINC00552-201ENST00000625151 HSP90AA2PQ14568 343 aaPredicted RBP18.38■□□□□ 0.53
LINC00552-201ENST00000625151 BEND3Q5T5X7 828 aa18.38■□□□□ 0.53
LINC00552-201ENST00000625151 LSG1Q9H089 658 aaKnown RBP18.38■□□□□ 0.53
LINC00552-201ENST00000625151 RGPD2P0DJD1 1756 aa18.38■□□□□ 0.53
LINC00552-201ENST00000625151 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
LINC00552-201ENST00000625151 PI4KAP2A4QPH2 592 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 KCNQ3O43525 872 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 ANXA1P04083 346 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 RASEFQ8IZ41 740 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 PI4KAP1Q8N8J0 262 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 C1orf167Q5SNV9 1468 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 RRP9O43818 475 aaKnown RBP18.37■□□□□ 0.53
LINC00552-201ENST00000625151 TTC14Q96N46 770 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
LINC00552-201ENST00000625151 ZNF500O60304 480 aaPredicted RBP18.37■□□□□ 0.53
LINC00552-201ENST00000625151 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.37■□□□□ 0.53
LINC00552-201ENST00000625151 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
LINC00552-201ENST00000625151 DDX17Q92841 729 aaKnown RBP18.37■□□□□ 0.53
LINC00552-201ENST00000625151 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
LINC00552-201ENST00000625151 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
LINC00552-201ENST00000625151 LARP6Q9BRS8 491 aaKnown RBP18.36■□□□□ 0.53
LINC00552-201ENST00000625151 TSPY26PQ9H489 355 aa18.36■□□□□ 0.53
LINC00552-201ENST00000625151 CWC27Q6UX04 472 aaKnown RBP18.36■□□□□ 0.53
LINC00552-201ENST00000625151 ZKSCAN5Q9Y2L8 839 aa18.36■□□□□ 0.53
LINC00552-201ENST00000625151 AK2P54819 239 aa18.35■□□□□ 0.53
LINC00552-201ENST00000625151 PSME1Q06323 249 aa18.35■□□□□ 0.53
LINC00552-201ENST00000625151 SYAP1Q96A49 352 aaPredicted RBP18.35■□□□□ 0.53
LINC00552-201ENST00000625151 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
LINC00552-201ENST00000625151 ADCY9O60503 1353 aa18.35■□□□□ 0.53
LINC00552-201ENST00000625151 MST1RQ04912 1400 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms