RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 GSPT1P15170 499 aaKnown RBP8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 GNAI1P63096 354 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 TWISTNBQ3B726 338 aaPredicted RBP8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 GOLGA6L1Q8N7Z2 621 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 RNF214Q8ND24 703 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 ARHGAP45Q92619 1136 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 ZNF428Q96B54 188 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 GCC1Q96CN9 775 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 SPATA31D1Q6ZQQ2 1576 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 RGS12O14924 1447 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 C3P01024 1663 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 KRT24Q2M2I5 525 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 NRKQ7Z2Y5 1582 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 NOL10Q9BSC4 688 aaKnown RBP8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 PAXBP1Q9Y5B6 917 aa8.97□□□□□ -0.97
TRIM49B-202ENST00000622138 ZBTB7CA1YPR0 619 aa8.96□□□□□ -0.97
TRIM49B-202ENST00000622138 SATB1Q01826 763 aa8.96□□□□□ -0.97
TRIM49B-202ENST00000622138 CACNB1Q02641 598 aaPredicted RBP8.96□□□□□ -0.97
TRIM49B-202ENST00000622138 RABEP1Q15276 862 aa8.96□□□□□ -0.97
TRIM49B-202ENST00000622138 RNF20Q5VTR2 975 aa8.96□□□□□ -0.97
TRIM49B-202ENST00000622138 C17orf53Q8N3J3 647 aaPredicted RBP8.96□□□□□ -0.97
TRIM49B-202ENST00000622138 ATP10DQ9P241 1426 aa8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 AATKQ6ZMQ8 1374 aa8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 PATL2C9JE40 543 aaKnown RBP8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 WASLO00401 505 aaPredicted RBP8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 KIF1CO43896 1103 aaKnown RBP8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 ADCY5O95622 1261 aa8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 MCCP23508 829 aa8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 NBPF20Q3BBV1 942 aa8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 OTUD7AQ8TE49 926 aaPredicted RBP8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 CFAP44Q96MT7 982 aa8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 CWC15Q9P013 229 aaKnown RBP8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 AKAP12Q02952 1782 aa8.96□□□□□ -0.98
TRIM49B-202ENST00000622138 PRR36Q9H6K5 1346 aa8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 CT47A1Q5JQC4 288 aaPredicted RBP8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 TXNDC2Q86VQ3 553 aa8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 EGFL6Q8IUX8 553 aa8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 USP25Q9UHP3 1055 aa8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 HSP90AB3PQ58FF7 597 aa8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 TEX35Q5T0J7 233 aa8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 PLEKHM2Q8IWE5 1019 aa8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 C16orf71Q8IYS4 520 aaPredicted RBP8.95□□□□□ -0.98
TRIM49B-202ENST00000622138 ITSN1Q15811 1721 aa8.94□□□□□ -0.98
TRIM49B-202ENST00000622138 CDC45O75419 566 aa8.94□□□□□ -0.98
TRIM49B-202ENST00000622138 CCDC112Q8NEF3 446 aa8.94□□□□□ -0.98
TRIM49B-202ENST00000622138 NUDT16Q96DE0 195 aaKnown RBP8.94□□□□□ -0.98
TRIM49B-202ENST00000622138 TRERF1Q96PN7 1200 aa8.94□□□□□ -0.98
TRIM49B-202ENST00000622138 DONSONQ9NYP3 566 aa8.94□□□□□ -0.98
TRIM49B-202ENST00000622138 TSPOAP1O95153 1857 aa8.94□□□□□ -0.98
TRIM49B-202ENST00000622138 AGLP35573 1532 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 PEAK1Q9H792 1746 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 MYO1CO00159 1063 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 MLECQ14165 292 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 MNS1Q8NEH6 495 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 COG3Q96JB2 828 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 API5Q9BZZ5 524 aaKnown RBP8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 KCNF1Q9H3M0 494 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 PYCARDQ9ULZ3 195 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 MSH6P52701 1360 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 PRR29P0C7W0 189 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 BMS1Q14692 1282 aaKnown RBP8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
TRIM49B-202ENST00000622138 A0A1B0GUL7 405 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 EIF4A2Q14240 407 aaKnown RBP8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 NOM1Q5C9Z4 860 aaKnown RBP8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 TTC22Q5TAA0 569 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 DCTPP1Q9H773 170 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 ZNF446Q9NWS9 450 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 DIP2BQ9P265 1576 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 SMARCA5O60264 1052 aaPredicted RBP8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 KDM4AO75164 1064 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 TPM4P67936 248 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 INTS3Q68E01 1043 aaKnown RBP8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 MCM10Q7L590 875 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 ATG3Q9NT62 314 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 RAI14Q9P0K7 980 aa8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 NSFL1CQ9UNZ2 370 aaKnown RBP8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 RIMS1Q86UR5 1692 aaKnown RBP8.92□□□□□ -0.98
TRIM49B-202ENST00000622138 TECPR2O15040 1411 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 HTATSF1O43719 755 aaKnown RBP8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 RBM6P78332 1123 aaKnown RBP8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 SULT6B1Q6IMI4 303 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 CEP85Q6P2H3 762 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 SYT10Q6XYQ8 523 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 CCDC91Q7Z6B0 441 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 ERO1AQ96HE7 468 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 MED4Q9NPJ6 270 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 JRKLQ9Y4A0 524 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 KIF24Q5T7B8 1368 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 RGPD1P0DJD0 1748 aa8.91□□□□□ -0.98
TRIM49B-202ENST00000622138 APBB1O00213 710 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 ATP2B1P20020 1258 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 GPS2Q13227 327 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 SRLQ86TD4 932 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 ANKRD44Q8N8A2 993 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 MEIS3Q99687 375 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms