RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 LGR6Q9HBX8 967 aa21.79■■□□□ 1.08
FAM3A-222ENST00000621967 SCN11AQ9UI33 1791 aa21.79■■□□□ 1.08
FAM3A-222ENST00000621967 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
FAM3A-222ENST00000621967 ADAMTS7Q9UKP4 1686 aa21.78■■□□□ 1.08
FAM3A-222ENST00000621967 RGS12O14924 1447 aa21.78■■□□□ 1.08
FAM3A-222ENST00000621967 TEFQ10587 303 aa21.78■■□□□ 1.08
FAM3A-222ENST00000621967 BMP2KLQ5H9B9 411 aa21.78■■□□□ 1.08
FAM3A-222ENST00000621967 API5Q9BZZ5 524 aaKnown RBP21.78■■□□□ 1.08
FAM3A-222ENST00000621967 BRWD3Q6RI45 1802 aa21.76■■□□□ 1.07
FAM3A-222ENST00000621967 ELL2O00472 640 aaPredicted RBP21.76■■□□□ 1.07
FAM3A-222ENST00000621967 RBM25P49756 843 aaKnown RBP21.76■■□□□ 1.07
FAM3A-222ENST00000621967 KRT27Q7Z3Y8 459 aa21.76■■□□□ 1.07
FAM3A-222ENST00000621967 SIRT2Q8IXJ6 389 aa21.75■■□□□ 1.07
FAM3A-222ENST00000621967 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
FAM3A-222ENST00000621967 CABP4P57796 275 aa21.74■■□□□ 1.07
FAM3A-222ENST00000621967 DOT1LQ8TEK3 1739 aa21.74■■□□□ 1.07
FAM3A-222ENST00000621967 ERVV-2B6SEH9 535 aa21.73■■□□□ 1.07
FAM3A-222ENST00000621967 C1orf115Q9H7X2 142 aa21.73■■□□□ 1.07
FAM3A-222ENST00000621967 SLC52A2Q9HAB3 445 aa21.73■■□□□ 1.07
FAM3A-222ENST00000621967 MRC1P22897 1456 aa21.73■■□□□ 1.07
FAM3A-222ENST00000621967 FAM182BQ5T319 152 aa21.72■■□□□ 1.07
FAM3A-222ENST00000621967 IL27Q8NEV9 243 aa21.72■■□□□ 1.07
FAM3A-222ENST00000621967 KAT6BQ8WYB5 2073 aa21.72■■□□□ 1.07
FAM3A-222ENST00000621967 ANKRD45Q5TZF3 282 aa21.72■■□□□ 1.07
FAM3A-222ENST00000621967 SYTL4Q96C24 671 aaPredicted RBP21.72■■□□□ 1.07
FAM3A-222ENST00000621967 TAF7Q15545 349 aaPredicted RBP21.71■■□□□ 1.07
FAM3A-222ENST00000621967 CHL1O00533 1208 aa21.7■■□□□ 1.07
FAM3A-222ENST00000621967 NFATC2IPQ8NCF5 419 aa21.7■■□□□ 1.07
FAM3A-222ENST00000621967 TMOD3Q9NYL9 352 aa21.7■■□□□ 1.07
FAM3A-222ENST00000621967 INTS3Q68E01 1043 aaKnown RBP21.7■■□□□ 1.06
FAM3A-222ENST00000621967 ACSBG1Q96GR2 724 aa21.7■■□□□ 1.06
FAM3A-222ENST00000621967 SIPA1L3O60292 1781 aaPredicted RBP21.69■■□□□ 1.06
FAM3A-222ENST00000621967 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
FAM3A-222ENST00000621967 BTBD11A6QL63 1104 aa21.68■■□□□ 1.06
FAM3A-222ENST00000621967 ITGB4P16144 1822 aa21.68■■□□□ 1.06
FAM3A-222ENST00000621967 PRIM1P49642 420 aaKnown RBP21.68■■□□□ 1.06
FAM3A-222ENST00000621967 SNX21Q969T3 373 aa21.68■■□□□ 1.06
FAM3A-222ENST00000621967 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
FAM3A-222ENST00000621967 BCL9O00512 1426 aa21.68■■□□□ 1.06
FAM3A-222ENST00000621967 ATP10DQ9P241 1426 aa21.67■■□□□ 1.06
FAM3A-222ENST00000621967 FAM196AQ6ZSG2 479 aa21.67■■□□□ 1.06
FAM3A-222ENST00000621967 CHMP5Q9NZZ3 219 aa21.67■■□□□ 1.06
FAM3A-222ENST00000621967 HSCBQ8IWL3 235 aa21.67■■□□□ 1.06
FAM3A-222ENST00000621967 BABAM1Q9NWV8 329 aa21.67■■□□□ 1.06
FAM3A-222ENST00000621967 EP400Q96L91 3159 aa21.66■■□□□ 1.06
FAM3A-222ENST00000621967 CACNA1FO60840 1977 aa21.66■■□□□ 1.06
FAM3A-222ENST00000621967 DCTPP1Q9H773 170 aa21.65■■□□□ 1.06
FAM3A-222ENST00000621967 BRPF3Q9ULD4 1205 aa21.65■■□□□ 1.06
FAM3A-222ENST00000621967 NHSQ6T4R5 1651 aa21.64■■□□□ 1.05
FAM3A-222ENST00000621967 PIGBQ92521 554 aa21.64■■□□□ 1.05
FAM3A-222ENST00000621967 KDM3BQ7LBC6 1761 aa21.63■■□□□ 1.05
FAM3A-222ENST00000621967 DDIT3P35638 169 aa21.63■■□□□ 1.05
FAM3A-222ENST00000621967 TTC5Q8N0Z6 440 aa21.63■■□□□ 1.05
FAM3A-222ENST00000621967 PTPRCP08575 1304 aa21.63■■□□□ 1.05
FAM3A-222ENST00000621967 KCNQ2O43526 872 aa21.63■■□□□ 1.05
FAM3A-222ENST00000621967 KRT24Q2M2I5 525 aa21.63■■□□□ 1.05
FAM3A-222ENST00000621967 TBC1D9Q6ZT07 1266 aa21.63■■□□□ 1.05
FAM3A-222ENST00000621967 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
FAM3A-222ENST00000621967 SLC39A6Q13433 755 aa21.62■■□□□ 1.05
FAM3A-222ENST00000621967 KIF2CQ99661 725 aa21.62■■□□□ 1.05
FAM3A-222ENST00000621967 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
FAM3A-222ENST00000621967 MCM4P33991 863 aa21.61■■□□□ 1.05
FAM3A-222ENST00000621967 ZNF790Q6PG37 636 aa21.61■■□□□ 1.05
FAM3A-222ENST00000621967 ANKRD44Q8N8A2 993 aa21.61■■□□□ 1.05
FAM3A-222ENST00000621967 SPRYD3Q8NCJ5 442 aa21.61■■□□□ 1.05
FAM3A-222ENST00000621967 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
FAM3A-222ENST00000621967 PLEKHM2Q8IWE5 1019 aa21.59■■□□□ 1.05
FAM3A-222ENST00000621967 RPAP2Q8IXW5 612 aaPredicted RBP21.59■■□□□ 1.05
FAM3A-222ENST00000621967 KCNQ3O43525 872 aa21.59■■□□□ 1.05
FAM3A-222ENST00000621967 CDC45O75419 566 aa21.59■■□□□ 1.05
FAM3A-222ENST00000621967 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.04
FAM3A-222ENST00000621967 BTAF1O14981 1849 aa21.57■■□□□ 1.04
FAM3A-222ENST00000621967 GSPT1P15170 499 aaKnown RBP21.57■■□□□ 1.04
FAM3A-222ENST00000621967 BCL11BQ9C0K0 894 aaPredicted RBP21.57■■□□□ 1.04
FAM3A-222ENST00000621967 TRIM37O94972 964 aa21.57■■□□□ 1.04
FAM3A-222ENST00000621967 CEP85Q6P2H3 762 aa21.57■■□□□ 1.04
FAM3A-222ENST00000621967 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
FAM3A-222ENST00000621967 EIF5BO60841 1220 aaKnown RBP21.56■■□□□ 1.04
FAM3A-222ENST00000621967 EIF4A1P60842 406 aaKnown RBP21.56■■□□□ 1.04
FAM3A-222ENST00000621967 PTF1AQ7RTS3 328 aa21.56■■□□□ 1.04
FAM3A-222ENST00000621967 TUBGCP6Q96RT7 1819 aa21.56■■□□□ 1.04
FAM3A-222ENST00000621967 FMNL2Q96PY5 1086 aa21.55■■□□□ 1.04
FAM3A-222ENST00000621967 CIZ1Q9ULV3 898 aaPredicted RBP21.55■■□□□ 1.04
FAM3A-222ENST00000621967 UBR2Q8IWV8 1755 aa21.55■■□□□ 1.04
FAM3A-222ENST00000621967 PTCD1O75127 700 aaKnown RBP21.55■■□□□ 1.04
FAM3A-222ENST00000621967 TTC22Q5TAA0 569 aa21.55■■□□□ 1.04
FAM3A-222ENST00000621967 SMARCC1Q92922 1105 aaPredicted RBP21.55■■□□□ 1.04
FAM3A-222ENST00000621967 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
FAM3A-222ENST00000621967 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
FAM3A-222ENST00000621967 PALLDQ8WX93 1383 aa21.53■■□□□ 1.04
FAM3A-222ENST00000621967 RBM42Q9BTD8 480 aaKnown RBP21.53■■□□□ 1.04
FAM3A-222ENST00000621967 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
FAM3A-222ENST00000621967 L1TD1Q5T7N2 865 aaKnown RBP21.51■■□□□ 1.03
FAM3A-222ENST00000621967 MEIS3Q99687 375 aa21.51■■□□□ 1.03
FAM3A-222ENST00000621967 HEG1Q9ULI3 1381 aa21.51■■□□□ 1.03
FAM3A-222ENST00000621967 DDX11L8A8MPP1 907 aa21.49■■□□□ 1.03
FAM3A-222ENST00000621967 CD2BP2O95400 341 aaKnown RBP21.49■■□□□ 1.03
FAM3A-222ENST00000621967 SNRPA1P09661 255 aaKnown RBP21.49■■□□□ 1.03
FAM3A-222ENST00000621967 K7ELQ4 463 aaPredicted RBP21.49■■□□□ 1.03
FAM3A-222ENST00000621967 GIGYF1O75420 1035 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms