RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
TP53-225ENST00000619485 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
TP53-225ENST00000619485 PDE4CQ08493 712 aa12.65□□□□□ -0.38
TP53-225ENST00000619485 RBSNQ9H1K0 784 aa12.65□□□□□ -0.38
TP53-225ENST00000619485 C1orf167Q5SNV9 1468 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 TRPM3Q9HCF6 1732 aaPredicted RBP12.64□□□□□ -0.39
TP53-225ENST00000619485 REC8O95072 547 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 GCP02774 474 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 ANXA1P04083 346 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 NEK4P51957 841 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 RNF214Q8ND24 703 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 SYCE3A1L190 88 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
TP53-225ENST00000619485 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
TP53-225ENST00000619485 PRAMEF22A3QJZ6 481 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 ERC2O15083 957 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 RPAP2Q8IXW5 612 aaPredicted RBP12.63□□□□□ -0.39
TP53-225ENST00000619485 GPT2Q8TD30 523 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 PPP1R9BQ96SB3 815 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 EXOC6BQ9Y2D4 811 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 IP6K1Q92551 441 aa12.63□□□□□ -0.39
TP53-225ENST00000619485 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
TP53-225ENST00000619485 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
TP53-225ENST00000619485 RILPL2Q969X0 211 aa12.62□□□□□ -0.39
TP53-225ENST00000619485 CWC22Q9HCG8 908 aaKnown RBP12.62□□□□□ -0.39
TP53-225ENST00000619485 LRRC37A3O60309 1634 aa12.62□□□□□ -0.39
TP53-225ENST00000619485 RTL1A6NKG5 1358 aa12.62□□□□□ -0.39
TP53-225ENST00000619485 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
TP53-225ENST00000619485 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
TP53-225ENST00000619485 R3HCC1Q9Y3T6 440 aaKnown RBP12.62□□□□□ -0.39
TP53-225ENST00000619485 ZNF445P59923 1031 aa12.61□□□□□ -0.39
TP53-225ENST00000619485 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
TP53-225ENST00000619485 ARID3AQ99856 593 aa12.61□□□□□ -0.39
TP53-225ENST00000619485 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
TP53-225ENST00000619485 HMMRO75330 724 aa12.61□□□□□ -0.39
TP53-225ENST00000619485 CYP2E1P05181 493 aaPredicted RBP12.61□□□□□ -0.39
TP53-225ENST00000619485 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
TP53-225ENST00000619485 XIRP1Q702N8 1843 aaKnown RBP12.61□□□□□ -0.39
TP53-225ENST00000619485 MST1RQ04912 1400 aa12.61□□□□□ -0.39
TP53-225ENST00000619485 GNAT3A8MTJ3 354 aa12.6□□□□□ -0.39
TP53-225ENST00000619485 TPM2P07951 284 aa12.6□□□□□ -0.39
TP53-225ENST00000619485 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
TP53-225ENST00000619485 ANO2Q9NQ90 1003 aa12.6□□□□□ -0.39
TP53-225ENST00000619485 TMEM63CQ9P1W3 806 aa12.6□□□□□ -0.39
TP53-225ENST00000619485 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
TP53-225ENST00000619485 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
TP53-225ENST00000619485 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
TP53-225ENST00000619485 IBTKQ9P2D0 1353 aaPredicted RBP12.6□□□□□ -0.39
TP53-225ENST00000619485 PDE1AP54750 535 aa12.59□□□□□ -0.39
TP53-225ENST00000619485 TMX3Q96JJ7 454 aa12.59□□□□□ -0.39
TP53-225ENST00000619485 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
TP53-225ENST00000619485 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
TP53-225ENST00000619485 FAM208AQ9UK61 1670 aaKnown RBP12.58□□□□□ -0.39
TP53-225ENST00000619485 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.58□□□□□ -0.4
TP53-225ENST00000619485 MPNDQ8N594 471 aa12.58□□□□□ -0.4
TP53-225ENST00000619485 UPF3BQ9BZI7 483 aaKnown RBP12.58□□□□□ -0.4
TP53-225ENST00000619485 FAM13BQ9NYF5 915 aa12.58□□□□□ -0.4
TP53-225ENST00000619485 PTPRCP08575 1304 aa12.58□□□□□ -0.4
TP53-225ENST00000619485 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
TP53-225ENST00000619485 C19orf44Q9H6X5 657 aa12.58□□□□□ -0.4
TP53-225ENST00000619485 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
TP53-225ENST00000619485 OFD1O75665 1012 aa12.57□□□□□ -0.4
TP53-225ENST00000619485 EIF2S2P20042 333 aaKnown RBP12.57□□□□□ -0.4
TP53-225ENST00000619485 ZNF530Q6P9A1 599 aaPredicted RBP12.57□□□□□ -0.4
TP53-225ENST00000619485 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
TP53-225ENST00000619485 SLIT3O75094 1523 aa12.57□□□□□ -0.4
TP53-225ENST00000619485 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
TP53-225ENST00000619485 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
TP53-225ENST00000619485 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
TP53-225ENST00000619485 MCCP23508 829 aa12.56□□□□□ -0.4
TP53-225ENST00000619485 FKBP5Q13451 457 aaPredicted RBP12.56□□□□□ -0.4
TP53-225ENST00000619485 LRSAM1Q6UWE0 723 aa12.56□□□□□ -0.4
TP53-225ENST00000619485 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
TP53-225ENST00000619485 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
TP53-225ENST00000619485 MAP4K4O95819 1239 aaPredicted RBP12.55□□□□□ -0.4
TP53-225ENST00000619485 GNAI2P04899 355 aa12.55□□□□□ -0.4
TP53-225ENST00000619485 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
TP53-225ENST00000619485 PDIA4P13667 645 aaKnown RBP12.55□□□□□ -0.4
TP53-225ENST00000619485 ATF3P18847 181 aa12.55□□□□□ -0.4
TP53-225ENST00000619485 MX1P20591 662 aa12.55□□□□□ -0.4
TP53-225ENST00000619485 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
TP53-225ENST00000619485 STK31Q9BXU1 1019 aa12.55□□□□□ -0.4
TP53-225ENST00000619485 LRRCC1Q9C099 1032 aa12.55□□□□□ -0.4
TP53-225ENST00000619485 NOL7Q9UMY1 257 aaKnown RBP12.55□□□□□ -0.4
TP53-225ENST00000619485 PNMA6EA0A0J9YXQ4 647 aa12.54□□□□□ -0.4
TP53-225ENST00000619485 SLC39A6Q13433 755 aa12.54□□□□□ -0.4
TP53-225ENST00000619485 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
TP53-225ENST00000619485 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
TP53-225ENST00000619485 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
TP53-225ENST00000619485 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
TP53-225ENST00000619485 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
TP53-225ENST00000619485 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
TP53-225ENST00000619485 MEGF6O75095 1541 aa12.53□□□□□ -0.4
TP53-225ENST00000619485 UQCRHLA0A096LP55 91 aa12.53□□□□□ -0.4
TP53-225ENST00000619485 MBD3O95983 291 aa12.53□□□□□ -0.4
TP53-225ENST00000619485 UQCRHP07919 91 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms