RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 CCDC113Q9H0I3 377 aa12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 IFFO1Q0D2I5 559 aa12.95□□□□□ -0.34
CCDC144B-208ENST00000618081 SFPQP23246 707 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 NSD3Q9BZ95 1437 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 USO1O60763 962 aaKnown RBP12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 AMPD3Q01432 767 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 SSRP1Q08945 709 aaKnown RBP12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 C8orf76Q96K31 380 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 TOP2BQ02880 1626 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 KIF5BP33176 963 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 CDCA7LQ96GN5 454 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 PYM1Q9BRP8 204 aaKnown RBP12.94□□□□□ -0.34
CCDC144B-208ENST00000618081 TMCO3Q6UWJ1 677 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 ANO10Q9NW15 660 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 UBXN4Q92575 508 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 SH2B1Q9NRF2 756 aaPredicted RBP12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 HYPKQ9NX55 129 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 RANBP6O60518 1105 aaKnown RBP12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 CALML4Q96GE6 196 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 CEP63Q96MT8 703 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 DDX11Q96FC9 970 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 ZNF213O14771 459 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 CTAGE5O15320 804 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 MYO1BO43795 1136 aa12.93□□□□□ -0.34
CCDC144B-208ENST00000618081 TTF1Q15361 905 aaPredicted RBP12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 KLHL10Q6JEL2 608 aa12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 FILIP1Q7Z7B0 1213 aa12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 SSX2IPQ9Y2D8 614 aa12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 BAG3O95817 575 aa12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
CCDC144B-208ENST00000618081 MACROD2A1Z1Q3 448 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 ZC3H6P61129 1189 aaKnown RBP12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 NAA15Q9BXJ9 866 aaKnown RBP12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 ALS2CR12Q96Q35 445 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 UQCRHLA0A096LP55 91 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 UQCRHP07919 91 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 XPCQ01831 940 aaPredicted RBP12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 PDE4BQ07343 736 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 TSNARE1Q96NA8 513 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 HLA-DOAP06340 250 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 SPTY2D1Q68D10 685 aaPredicted RBP12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 PAFAH1B1P43034 410 aa12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 SREK1Q8WXA9 508 aaKnown RBP12.91□□□□□ -0.34
CCDC144B-208ENST00000618081 TOP1P11387 765 aaKnown RBP12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 FERP16591 822 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 SYCP3Q8IZU3 236 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 PDCL2Q8N4E4 241 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 MX1P20591 662 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 DUSP27Q5VZP5 1158 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 KIF18AQ8NI77 898 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 NLRP5P59047 1200 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 SMC1AQ14683 1233 aaKnown RBP12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 DDX12PQ92771 950 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 NUDT16Q96DE0 195 aaKnown RBP12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 PTPN14Q15678 1187 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 MPRIPQ6WCQ1 1025 aa12.9□□□□□ -0.34
CCDC144B-208ENST00000618081 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 CAMK4Q16566 473 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 SAMM50Q9Y512 469 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 YEATS4O95619 227 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 ST5P78524 1137 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 MYD88Q99836 296 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 CCDC172P0C7W6 258 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
CCDC144B-208ENST00000618081 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 LRRC27Q9C0I9 530 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 GOLGA8BA8MQT2 603 aa12.88□□□□□ -0.35
CCDC144B-208ENST00000618081 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms