RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TJP1Q07157 1748 aa24.18■■□□□ 1.46
TRAPPC3-209ENST00000616395 NFKBIEO00221 500 aa24.17■■□□□ 1.46
TRAPPC3-209ENST00000616395 ZPR1O75312 459 aa24.17■■□□□ 1.46
TRAPPC3-209ENST00000616395 FOXN1O15353 648 aa24.16■■□□□ 1.46
TRAPPC3-209ENST00000616395 MTHFSP49914 203 aa24.16■■□□□ 1.46
TRAPPC3-209ENST00000616395 TTLL6Q8N841 843 aa24.16■■□□□ 1.46
TRAPPC3-209ENST00000616395 NFATC2IPQ8NCF5 419 aa24.16■■□□□ 1.46
TRAPPC3-209ENST00000616395 CREBZFQ9NS37 354 aa24.16■■□□□ 1.46
TRAPPC3-209ENST00000616395 NFIXQ14938 502 aa24.15■■□□□ 1.46
TRAPPC3-209ENST00000616395 DPY19L2Q6NUT2 758 aa24.14■■□□□ 1.46
TRAPPC3-209ENST00000616395 TNNT2P45379 298 aaPredicted RBP24.13■■□□□ 1.45
TRAPPC3-209ENST00000616395 AMOTQ4VCS5 1084 aa24.12■■□□□ 1.45
TRAPPC3-209ENST00000616395 C2CD5Q86YS7 1000 aa24.12■■□□□ 1.45
TRAPPC3-209ENST00000616395 SOS1Q07889 1333 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC3-209ENST00000616395 DLEC1Q9Y238 1755 aa24.12■■□□□ 1.45
TRAPPC3-209ENST00000616395 CHADLQ6NUI6 762 aa24.11■■□□□ 1.45
TRAPPC3-209ENST00000616395 DNAJC10Q8IXB1 793 aa24.11■■□□□ 1.45
TRAPPC3-209ENST00000616395 PRDM10Q9NQV6 1147 aa24.11■■□□□ 1.45
TRAPPC3-209ENST00000616395 AFDNP55196 1824 aaKnown RBP24.11■■□□□ 1.45
TRAPPC3-209ENST00000616395 SERPINB2P05120 415 aa24.1■■□□□ 1.45
TRAPPC3-209ENST00000616395 C1orf141Q5JVX7 400 aa24.1■■□□□ 1.45
TRAPPC3-209ENST00000616395 CCDC88AQ3V6T2 1871 aa24.1■■□□□ 1.45
TRAPPC3-209ENST00000616395 NRXN2Q9P2S2 1712 aa24.1■■□□□ 1.45
TRAPPC3-209ENST00000616395 H0YIN7 160 aa24.09■■□□□ 1.45
TRAPPC3-209ENST00000616395 POTEIP0CG38 1075 aa24.09■■□□□ 1.45
TRAPPC3-209ENST00000616395 POTEJP0CG39 1038 aa24.09■■□□□ 1.45
TRAPPC3-209ENST00000616395 NARFQ9UHQ1 456 aa24.09■■□□□ 1.45
TRAPPC3-209ENST00000616395 CNTNAP1P78357 1384 aa24.08■■□□□ 1.45
TRAPPC3-209ENST00000616395 CARMIL3Q8ND23 1372 aa24.08■■□□□ 1.45
TRAPPC3-209ENST00000616395 ERFEQ4G0M1 354 aa24.08■■□□□ 1.44
TRAPPC3-209ENST00000616395 BCL2L12Q9HB09 334 aa24.08■■□□□ 1.44
TRAPPC3-209ENST00000616395 AEBP1Q8IUX7 1158 aa24.07■■□□□ 1.44
TRAPPC3-209ENST00000616395 CYP19A1P11511 503 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC3-209ENST00000616395 CTCFP49711 727 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC3-209ENST00000616395 COL15A1P39059 1388 aa24.05■■□□□ 1.44
TRAPPC3-209ENST00000616395 AIDAQ96BJ3 306 aa24.05■■□□□ 1.44
TRAPPC3-209ENST00000616395 ZNF219Q9P2Y4 722 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC3-209ENST00000616395 C21orf2O43822 256 aa24.04■■□□□ 1.44
TRAPPC3-209ENST00000616395 DDNO94850 711 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC3-209ENST00000616395 ZBTB1Q9Y2K1 713 aa24.03■■□□□ 1.44
TRAPPC3-209ENST00000616395 VEGFBP49765 207 aa24.02■■□□□ 1.44
TRAPPC3-209ENST00000616395 ZNF622Q969S3 477 aaKnown RBP eCLIP24.02■■□□□ 1.44
TRAPPC3-209ENST00000616395 LBX1P52954 281 aa24.01■■□□□ 1.43
TRAPPC3-209ENST00000616395 BICDL1Q6ZP65 573 aa24.01■■□□□ 1.43
TRAPPC3-209ENST00000616395 PASKQ96RG2 1323 aa24■■□□□ 1.43
TRAPPC3-209ENST00000616395 FAM161AQ3B820 660 aa24■■□□□ 1.43
TRAPPC3-209ENST00000616395 SLC52A2Q9HAB3 445 aa23.99■■□□□ 1.43
TRAPPC3-209ENST00000616395 SCN11AQ9UI33 1791 aa23.98■■□□□ 1.43
TRAPPC3-209ENST00000616395 SLC39A6Q13433 755 aa23.98■■□□□ 1.43
TRAPPC3-209ENST00000616395 SULT6B1Q6IMI4 303 aa23.98■■□□□ 1.43
TRAPPC3-209ENST00000616395 WBP1LQ9NX94 342 aa23.98■■□□□ 1.43
TRAPPC3-209ENST00000616395 DICER1Q9UPY3 1922 aaKnown RBP23.98■■□□□ 1.43
TRAPPC3-209ENST00000616395 LTBP3Q9NS15 1303 aa23.97■■□□□ 1.43
TRAPPC3-209ENST00000616395 ZNF316A6NFI3 1004 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC3-209ENST00000616395 LDHDQ86WU2 507 aa23.97■■□□□ 1.43
TRAPPC3-209ENST00000616395 ABHD8Q96I13 439 aa23.97■■□□□ 1.43
TRAPPC3-209ENST00000616395 TAOK3Q9H2K8 898 aa23.97■■□□□ 1.43
TRAPPC3-209ENST00000616395 FER1L6Q2WGJ9 1857 aa23.97■■□□□ 1.43
TRAPPC3-209ENST00000616395 TMEM88BA6NKF7 163 aa23.96■■□□□ 1.43
TRAPPC3-209ENST00000616395 CCDC24Q8N4L8 307 aa23.96■■□□□ 1.43
TRAPPC3-209ENST00000616395 BRIP1Q9BX63 1249 aa23.96■■□□□ 1.43
TRAPPC3-209ENST00000616395 LGR6Q9HBX8 967 aa23.96■■□□□ 1.43
TRAPPC3-209ENST00000616395 CANXP27824 592 aaKnown RBP23.95■■□□□ 1.42
TRAPPC3-209ENST00000616395 ANKRD31Q8N7Z5 1873 aa23.95■■□□□ 1.42
TRAPPC3-209ENST00000616395 IQCA1LA6NCM1 817 aa23.94■■□□□ 1.42
TRAPPC3-209ENST00000616395 PDE6BP35913 854 aa23.94■■□□□ 1.42
TRAPPC3-209ENST00000616395 AKAP4Q5JQC9 854 aa23.94■■□□□ 1.42
TRAPPC3-209ENST00000616395 TAF1DQ9H5J8 278 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC3-209ENST00000616395 PDZRN3Q9UPQ7 1066 aa23.94■■□□□ 1.42
TRAPPC3-209ENST00000616395 COL11A2P13942 1736 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC3-209ENST00000616395 ITGBL1O95965 494 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC3-209ENST00000616395 TBC1D9BQ66K14 1250 aa23.93■■□□□ 1.42
TRAPPC3-209ENST00000616395 HSPA8P11142 646 aaKnown RBP23.92■■□□□ 1.42
TRAPPC3-209ENST00000616395 POLR3GLQ9BT43 218 aa23.92■■□□□ 1.42
TRAPPC3-209ENST00000616395 MRC1P22897 1456 aa23.91■■□□□ 1.42
TRAPPC3-209ENST00000616395 PRR5LQ6MZQ0 368 aa23.91■■□□□ 1.42
TRAPPC3-209ENST00000616395 L3MBTL3Q96JM7 780 aaPredicted RBP23.91■■□□□ 1.42
TRAPPC3-209ENST00000616395 VIRMAQ69YN4 1812 aaKnown RBP23.91■■□□□ 1.42
TRAPPC3-209ENST00000616395 EIF5P55010 431 aaKnown RBP23.9■■□□□ 1.42
TRAPPC3-209ENST00000616395 VSIG10Q8N0Z9 540 aa23.9■■□□□ 1.42
TRAPPC3-209ENST00000616395 RNMTO43148 476 aaKnown RBP23.89■■□□□ 1.42
TRAPPC3-209ENST00000616395 EAPPQ56P03 285 aaPredicted RBP23.89■■□□□ 1.42
TRAPPC3-209ENST00000616395 PRPF40BQ6NWY9 871 aaKnown RBP23.88■■□□□ 1.41
TRAPPC3-209ENST00000616395 CNKSR1Q969H4 720 aa23.87■■□□□ 1.41
TRAPPC3-209ENST00000616395 SLX4Q8IY92 1834 aa23.87■■□□□ 1.41
TRAPPC3-209ENST00000616395 A0A087WZG4 1122 aa23.86■■□□□ 1.41
TRAPPC3-209ENST00000616395 RASSF10A6NK89 507 aa23.86■■□□□ 1.41
TRAPPC3-209ENST00000616395 IL13P35225 146 aa23.86■■□□□ 1.41
TRAPPC3-209ENST00000616395 DEFB115Q30KQ5 88 aa23.86■■□□□ 1.41
TRAPPC3-209ENST00000616395 STYK1Q6J9G0 422 aa23.86■■□□□ 1.41
TRAPPC3-209ENST00000616395 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
TRAPPC3-209ENST00000616395 SCN4AP35499 1836 aa23.86■■□□□ 1.41
TRAPPC3-209ENST00000616395 STARD3NLO95772 234 aa23.85■■□□□ 1.41
TRAPPC3-209ENST00000616395 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
TRAPPC3-209ENST00000616395 SOGA3Q5TF21 947 aa23.85■■□□□ 1.41
TRAPPC3-209ENST00000616395 SRGNP10124 158 aa23.84■■□□□ 1.41
TRAPPC3-209ENST00000616395 MLLT1Q03111 559 aaPredicted RBP23.84■■□□□ 1.41
TRAPPC3-209ENST00000616395 TBC1D2BQ9UPU7 963 aa23.84■■□□□ 1.41
TRAPPC3-209ENST00000616395 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
TRAPPC3-209ENST00000616395 CCDC85CA6NKD9 419 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms