RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 MYD88Q99836 296 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 CAVIN4Q5BKX8 364 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 ZFYVE16Q7Z3T8 1539 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 SOS1Q07889 1333 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 PPFIBP1Q86W92 1011 aa10.72□□□□□ -0.69
SPTBN1-207ENST00000615901 CEBPZQ03701 1054 aaKnown RBP10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 DCTN1Q14203 1278 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 IFNL2Q8IZJ0 200 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 USHBP1Q8N6Y0 703 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 HMG20BQ9P0W2 317 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 ATP2B1P20020 1258 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 MPRIPQ6WCQ1 1025 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 ODF2Q5BJF6 829 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 A0A087WZG4 1122 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 MTMR7Q9Y216 660 aa10.71□□□□□ -0.69
SPTBN1-207ENST00000615901 IDH1O75874 414 aaKnown RBP10.71□□□□□ -0.7
SPTBN1-207ENST00000615901 SERPINC1P01008 464 aa10.71□□□□□ -0.7
SPTBN1-207ENST00000615901 KLHL34Q8N239 644 aa10.71□□□□□ -0.7
SPTBN1-207ENST00000615901 RNF41Q9H4P4 317 aaPredicted RBP10.71□□□□□ -0.7
SPTBN1-207ENST00000615901 MAP3K12Q12852 859 aa10.71□□□□□ -0.7
SPTBN1-207ENST00000615901 ANKRD18BA2A2Z9 1011 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 PRM3Q9NNZ6 103 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 ABCA8O94911 1581 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 TTC22Q5TAA0 569 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 ECHDC1Q9NTX5 307 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 MAP3K11Q16584 847 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 SLF2Q8IX21 1173 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 ZNF771Q7L3S4 317 aaPredicted RBP10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 IQCEQ6IPM2 695 aa10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 CWC25Q9NXE8 425 aaPredicted RBP10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 SEC63Q9UGP8 760 aaKnown RBP10.7□□□□□ -0.7
SPTBN1-207ENST00000615901 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 EDC4Q6P2E9 1401 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 NUCB1Q02818 461 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 SYNMO15061 1565 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 LIMCH1Q9UPQ0 1083 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 SAMD1Q6SPF0 538 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 SMARCA5O60264 1052 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 MAP3K2Q9Y2U5 619 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 FOXO3O43524 673 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 CCDC183Q5T5S1 534 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 MAP3K5Q99683 1374 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 SNRPA1P09661 255 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 KRT28Q7Z3Y7 464 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 TMOD2Q9NZR1 351 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 NPHP3Q7Z494 1330 aa10.69□□□□□ -0.7
SPTBN1-207ENST00000615901 NAPBQ9H115 298 aa10.68□□□□□ -0.7
SPTBN1-207ENST00000615901 TESK2Q96S53 571 aa10.68□□□□□ -0.7
SPTBN1-207ENST00000615901 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
SPTBN1-207ENST00000615901 SYCP1Q15431 976 aa10.68□□□□□ -0.7
SPTBN1-207ENST00000615901 ALDH1L1O75891 902 aa10.68□□□□□ -0.7
SPTBN1-207ENST00000615901 UPF3BQ9BZI7 483 aaKnown RBP10.68□□□□□ -0.7
SPTBN1-207ENST00000615901 KIF2AO00139 706 aaPredicted RBP10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 KDM4AO75164 1064 aa10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 TBC1D9Q6ZT07 1266 aa10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 BLMP54132 1417 aaPredicted RBP10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 TRMT112Q9UI30 125 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 F6X3S4 739 aa10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 PTCD1O75127 700 aaKnown RBP10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 RBM5P52756 815 aaKnown RBP eCLIP10.67□□□□□ -0.72e-10■■■■□ 20.1
SPTBN1-207ENST00000615901 CTAGE5O15320 804 aa10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 ADCY10Q96PN6 1610 aa10.67□□□□□ -0.7
SPTBN1-207ENST00000615901 CEBPAP49715 358 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 ANKIB1Q9P2G1 1089 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 HSP90AB2PQ58FF8 381 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 CAVIN2O95810 425 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 CLASP1Q7Z460 1538 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 CDC5LQ99459 802 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 CWC15Q9P013 229 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 WWC2Q6AWC2 1192 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 DZIP1Q86YF9 867 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 TBC1D32Q96NH3 1257 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 PIP4K2BP78356 416 aa10.66□□□□□ -0.7
SPTBN1-207ENST00000615901 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 BOLA2Q9H3K6 86 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 HECW2Q9P2P5 1572 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 GOLGA8BA8MQT2 603 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 EXOC5O00471 708 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 C8orf76Q96K31 380 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 SPTY2D1Q68D10 685 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 ZCCHC11Q5TAX3 1644 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-207ENST00000615901 BICDL1Q6ZP65 573 aa10.65□□□□□ -0.71
SPTBN1-207ENST00000615901 RPGRQ92834 1020 aaKnown RBP10.65□□□□□ -0.71
SPTBN1-207ENST00000615901 TET3O43151 1660 aa10.65□□□□□ -0.71
SPTBN1-207ENST00000615901 AKAP4Q5JQC9 854 aa10.65□□□□□ -0.71
SPTBN1-207ENST00000615901 SPC24Q8NBT2 197 aa10.65□□□□□ -0.71
SPTBN1-207ENST00000615901 CCDC112Q8NEF3 446 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms