RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 MAP3K4Q9Y6R4 1608 aa15.69■□□□□ 0.1
TCF3-220ENST00000611869 HSPA2P54652 639 aa15.68■□□□□ 0.1
TCF3-220ENST00000611869 FERMT3Q86UX7 667 aa15.68■□□□□ 0.1
TCF3-220ENST00000611869 C19orf44Q9H6X5 657 aa15.68■□□□□ 0.1
TCF3-220ENST00000611869 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
TCF3-220ENST00000611869 ANKRD13DQ6ZTN6 518 aa15.68■□□□□ 0.1
TCF3-220ENST00000611869 TSPOAP1O95153 1857 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 STARD3NLO95772 234 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 ANKRD1Q15327 319 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 PA2G4Q9UQ80 394 aaKnown RBP15.67■□□□□ 0.1
TCF3-220ENST00000611869 ERICH2A1L162 156 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
TCF3-220ENST00000611869 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 SIRT1Q96EB6 747 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 RRP12Q5JTH9 1297 aaKnown RBP15.67■□□□□ 0.1
TCF3-220ENST00000611869 MPNDQ8N594 471 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 STK11IPQ8N1F8 1099 aa15.67■□□□□ 0.1
TCF3-220ENST00000611869 MPHOSPH8Q99549 860 aa15.66■□□□□ 0.1
TCF3-220ENST00000611869 RNF17Q9BXT8 1623 aaKnown RBP15.66■□□□□ 0.1
TCF3-220ENST00000611869 KSR2Q6VAB6 950 aa15.66■□□□□ 0.1
TCF3-220ENST00000611869 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
TCF3-220ENST00000611869 PRR36Q9H6K5 1346 aa15.66■□□□□ 0.1
TCF3-220ENST00000611869 NPHP3Q7Z494 1330 aa15.66■□□□□ 0.1
TCF3-220ENST00000611869 KAT6BQ8WYB5 2073 aa15.66■□□□□ 0.1
TCF3-220ENST00000611869 SPHKAPQ2M3C7 1700 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 MEX3CQ5U5Q3 659 aaKnown RBP15.65■□□□□ 0.1
TCF3-220ENST00000611869 NBPF6Q5VWK0 638 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 ZSCAN31Q96LW9 406 aaPredicted RBP15.65■□□□□ 0.1
TCF3-220ENST00000611869 NBPF4Q96M43 638 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 SDF4Q9BRK5 362 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 E9PCH4 1651 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 ROBO2Q9HCK4 1378 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 GRM8O00222 908 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 GPTP24298 496 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 ESYT1Q9BSJ8 1104 aa15.65■□□□□ 0.1
TCF3-220ENST00000611869 PIP4K2BP78356 416 aa15.64■□□□□ 0.09
TCF3-220ENST00000611869 KRT85P78386 507 aa15.64■□□□□ 0.09
TCF3-220ENST00000611869 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.64■□□□□ 0.096e-7■■■□□ 18.6
TCF3-220ENST00000611869 GDPD2Q9HCC8 539 aa15.64■□□□□ 0.09
TCF3-220ENST00000611869 MADDQ8WXG6 1647 aa15.64■□□□□ 0.09
TCF3-220ENST00000611869 IDH1O75874 414 aaKnown RBP15.64■□□□□ 0.09
TCF3-220ENST00000611869 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
TCF3-220ENST00000611869 SYCE3A1L190 88 aa15.63■□□□□ 0.09
TCF3-220ENST00000611869 ATP2B1P20020 1258 aa15.63■□□□□ 0.09
TCF3-220ENST00000611869 EVI5LQ96CN4 794 aa15.63■□□□□ 0.09
TCF3-220ENST00000611869 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
TCF3-220ENST00000611869 RNMTO43148 476 aaKnown RBP15.63■□□□□ 0.09
TCF3-220ENST00000611869 IFIT1P09914 478 aaKnown RBP15.63■□□□□ 0.09
TCF3-220ENST00000611869 NOL10Q9BSC4 688 aaKnown RBP15.63■□□□□ 0.09
TCF3-220ENST00000611869 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
TCF3-220ENST00000611869 KRT32Q14532 448 aa15.63■□□□□ 0.09
TCF3-220ENST00000611869 SAFBQ15424 915 aaKnown RBP eCLIP15.63■□□□□ 0.09
TCF3-220ENST00000611869 TMX3Q96JJ7 454 aa15.62■□□□□ 0.09
TCF3-220ENST00000611869 LIMCH1Q9UPQ0 1083 aa15.62■□□□□ 0.09
TCF3-220ENST00000611869 ALDH1L1O75891 902 aa15.62■□□□□ 0.09
TCF3-220ENST00000611869 LINS1Q8NG48 757 aa15.62■□□□□ 0.09
TCF3-220ENST00000611869 USP19O94966 1318 aa15.62■□□□□ 0.09
TCF3-220ENST00000611869 SNX21Q969T3 373 aa15.61■□□□□ 0.09
TCF3-220ENST00000611869 ARHGAP31Q2M1Z3 1444 aa15.61■□□□□ 0.09
TCF3-220ENST00000611869 MTMR7Q9Y216 660 aa15.61■□□□□ 0.09
TCF3-220ENST00000611869 CCDC173Q0VFZ6 552 aa15.61■□□□□ 0.09
TCF3-220ENST00000611869 ZCRB1Q8TBF4 217 aaKnown RBP15.61■□□□□ 0.09
TCF3-220ENST00000611869 DDX17Q92841 729 aaKnown RBP15.61■□□□□ 0.09
TCF3-220ENST00000611869 SNRKQ9NRH2 765 aa15.61■□□□□ 0.09
TCF3-220ENST00000611869 PNMA6EA0A0J9YXQ4 647 aa15.61■□□□□ 0.09
TCF3-220ENST00000611869 IFIT5Q13325 482 aaKnown RBP15.61■□□□□ 0.09
TCF3-220ENST00000611869 BICDL1Q6ZP65 573 aa15.61■□□□□ 0.09
TCF3-220ENST00000611869 SOS1Q07889 1333 aaPredicted RBP15.6■□□□□ 0.09
TCF3-220ENST00000611869 AMOTL1Q8IY63 956 aa15.6■□□□□ 0.09
TCF3-220ENST00000611869 IL17REQ8NFR9 667 aa15.6■□□□□ 0.09
TCF3-220ENST00000611869 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
TCF3-220ENST00000611869 GOLIM4O00461 696 aa15.6■□□□□ 0.09
TCF3-220ENST00000611869 DHX16O60231 1041 aaKnown RBP15.6■□□□□ 0.09
TCF3-220ENST00000611869 CWC25Q9NXE8 425 aaPredicted RBP15.6■□□□□ 0.09
TCF3-220ENST00000611869 ABCC4O15439 1325 aa15.6■□□□□ 0.09
TCF3-220ENST00000611869 KINO60870 393 aaKnown RBP15.6■□□□□ 0.09
TCF3-220ENST00000611869 TCEANC2Q96MN5 208 aa15.6■□□□□ 0.09
TCF3-220ENST00000611869 RAD21O60216 631 aa15.59■□□□□ 0.09
TCF3-220ENST00000611869 TRMT112Q9UI30 125 aaKnown RBP15.59■□□□□ 0.09
TCF3-220ENST00000611869 ABCA9Q8IUA7 1624 aa15.59■□□□□ 0.09
TCF3-220ENST00000611869 PES1O00541 588 aaKnown RBP15.59■□□□□ 0.09
TCF3-220ENST00000611869 SART3Q15020 963 aaKnown RBP15.59■□□□□ 0.09
TCF3-220ENST00000611869 STK38Q15208 465 aa15.59■□□□□ 0.09
TCF3-220ENST00000611869 LMBR1LQ6UX01 489 aa15.59■□□□□ 0.09
TCF3-220ENST00000611869 DDX46Q7L014 1031 aaKnown RBP15.59■□□□□ 0.09
TCF3-220ENST00000611869 AATKQ6ZMQ8 1374 aa15.59■□□□□ 0.09
TCF3-220ENST00000611869 SPATA32Q96LK8 384 aa15.59■□□□□ 0.09
TCF3-220ENST00000611869 ATP7BP35670 1465 aa15.58■□□□□ 0.09
TCF3-220ENST00000611869 LETM1O95202 739 aaPredicted RBP15.58■□□□□ 0.09
TCF3-220ENST00000611869 USP26Q9BXU7 913 aa15.58■□□□□ 0.09
TCF3-220ENST00000611869 MARCH6O60337 910 aa15.58■□□□□ 0.08
TCF3-220ENST00000611869 NBPF7P0C2Y1 421 aaPredicted RBP15.58■□□□□ 0.08
TCF3-220ENST00000611869 ZNF592Q92610 1267 aa15.58■□□□□ 0.08
TCF3-220ENST00000611869 CTNNA3Q9UI47 895 aa15.58■□□□□ 0.08
TCF3-220ENST00000611869 ME1P48163 572 aa15.58■□□□□ 0.08
TCF3-220ENST00000611869 TPD52L1Q16890 204 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms