RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 PROSER3Q2NL68 480 aa14.21□□□□□ -0.13
LINC01278-204ENST00000609143 KSR2Q6VAB6 950 aa14.21□□□□□ -0.13
LINC01278-204ENST00000609143 ZNF496Q96IT1 587 aaPredicted RBP14.21□□□□□ -0.13
LINC01278-204ENST00000609143 FMNL2Q96PY5 1086 aa14.21□□□□□ -0.13
LINC01278-204ENST00000609143 SNRPA1P09661 255 aaKnown RBP14.21□□□□□ -0.14
LINC01278-204ENST00000609143 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.14
LINC01278-204ENST00000609143 TBC1D32Q96NH3 1257 aa14.21□□□□□ -0.14
LINC01278-204ENST00000609143 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.14
LINC01278-204ENST00000609143 MAP3K2Q9Y2U5 619 aa14.2□□□□□ -0.14
LINC01278-204ENST00000609143 LTBP4Q8N2S1 1624 aa14.2□□□□□ -0.14
LINC01278-204ENST00000609143 APBB1O00213 710 aa14.2□□□□□ -0.14
LINC01278-204ENST00000609143 ALDH1L1O75891 902 aa14.2□□□□□ -0.14
LINC01278-204ENST00000609143 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
LINC01278-204ENST00000609143 COL22A1Q8NFW1 1626 aaPredicted RBP14.19□□□□□ -0.14
LINC01278-204ENST00000609143 ERVV-2B6SEH9 535 aa14.19□□□□□ -0.14
LINC01278-204ENST00000609143 MFAP1P55081 439 aaKnown RBP14.19□□□□□ -0.14
LINC01278-204ENST00000609143 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
LINC01278-204ENST00000609143 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
LINC01278-204ENST00000609143 PDIA6Q15084 440 aa14.18□□□□□ -0.14
LINC01278-204ENST00000609143 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
LINC01278-204ENST00000609143 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
LINC01278-204ENST00000609143 SHANK3Q9BYB0 1731 aa14.18□□□□□ -0.14
LINC01278-204ENST00000609143 SMARCA5O60264 1052 aaPredicted RBP14.17□□□□□ -0.14
LINC01278-204ENST00000609143 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
LINC01278-204ENST00000609143 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
LINC01278-204ENST00000609143 C16orf71Q8IYS4 520 aaPredicted RBP14.17□□□□□ -0.14
LINC01278-204ENST00000609143 DDX54Q8TDD1 881 aaKnown RBP14.17□□□□□ -0.14
LINC01278-204ENST00000609143 LRRCC1Q9C099 1032 aa14.17□□□□□ -0.14
LINC01278-204ENST00000609143 LAMB4A4D0S4 1761 aa14.17□□□□□ -0.14
LINC01278-204ENST00000609143 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
LINC01278-204ENST00000609143 AIMP1Q12904 312 aaKnown RBP14.17□□□□□ -0.14
LINC01278-204ENST00000609143 LINS1Q8NG48 757 aa14.17□□□□□ -0.14
LINC01278-204ENST00000609143 SSH3Q8TE77 659 aa14.17□□□□□ -0.14
LINC01278-204ENST00000609143 C22orf23Q9BZE7 217 aa14.17□□□□□ -0.14
LINC01278-204ENST00000609143 IBTKQ9P2D0 1353 aaPredicted RBP14.16□□□□□ -0.14
LINC01278-204ENST00000609143 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
LINC01278-204ENST00000609143 CDC45O75419 566 aa14.16□□□□□ -0.14
LINC01278-204ENST00000609143 C9orf78Q9NZ63 289 aaPredicted RBP14.16□□□□□ -0.14
LINC01278-204ENST00000609143 MYL6BP14649 208 aa14.16□□□□□ -0.14
LINC01278-204ENST00000609143 BECN1Q14457 450 aa14.16□□□□□ -0.14
LINC01278-204ENST00000609143 USP35Q9P2H5 1018 aa14.16□□□□□ -0.14
LINC01278-204ENST00000609143 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
LINC01278-204ENST00000609143 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
LINC01278-204ENST00000609143 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
LINC01278-204ENST00000609143 OTUD7AQ8TE49 926 aaPredicted RBP14.15□□□□□ -0.14
LINC01278-204ENST00000609143 USP16Q9Y5T5 823 aa14.15□□□□□ -0.14
LINC01278-204ENST00000609143 NEXNQ0ZGT2 675 aa14.15□□□□□ -0.14
LINC01278-204ENST00000609143 POLA2Q14181 598 aa14.15□□□□□ -0.14
LINC01278-204ENST00000609143 GLI3P10071 1580 aa14.15□□□□□ -0.15
LINC01278-204ENST00000609143 TBC1D9Q6ZT07 1266 aa14.14□□□□□ -0.15
LINC01278-204ENST00000609143 XAGE3Q8WTP9 111 aa14.14□□□□□ -0.15
LINC01278-204ENST00000609143 UBR2Q8IWV8 1755 aa14.14□□□□□ -0.15
LINC01278-204ENST00000609143 ERBB4Q15303 1308 aa14.14□□□□□ -0.15
LINC01278-204ENST00000609143 COL16A1Q07092 1604 aaPredicted RBP14.14□□□□□ -0.15
LINC01278-204ENST00000609143 PAPPAQ13219 1627 aa14.14□□□□□ -0.15
LINC01278-204ENST00000609143 SRGAP3O43295 1099 aa14.14□□□□□ -0.15
LINC01278-204ENST00000609143 RAB11FIP3O75154 756 aa14.13□□□□□ -0.15
LINC01278-204ENST00000609143 COPS6Q7L5N1 327 aa14.13□□□□□ -0.15
LINC01278-204ENST00000609143 OSBPL3Q9H4L5 887 aa14.13□□□□□ -0.15
LINC01278-204ENST00000609143 SLC4A3P48751 1232 aa14.13□□□□□ -0.15
LINC01278-204ENST00000609143 CWF19L2Q2TBE0 894 aaKnown RBP14.13□□□□□ -0.15
LINC01278-204ENST00000609143 PHLPP1O60346 1717 aa14.13□□□□□ -0.15
LINC01278-204ENST00000609143 MTX1Q13505 466 aa14.12□□□□□ -0.15
LINC01278-204ENST00000609143 GRM8O00222 908 aa14.12□□□□□ -0.15
LINC01278-204ENST00000609143 SURF6O75683 361 aaKnown RBP14.12□□□□□ -0.15
LINC01278-204ENST00000609143 PDE1AP54750 535 aa14.12□□□□□ -0.15
LINC01278-204ENST00000609143 HSP90AB4PQ58FF6 505 aa14.12□□□□□ -0.15
LINC01278-204ENST00000609143 KCPQ6ZWJ8 1503 aa14.12□□□□□ -0.15
LINC01278-204ENST00000609143 PLCH1Q4KWH8 1693 aa14.12□□□□□ -0.15
LINC01278-204ENST00000609143 ANKRD13DQ6ZTN6 518 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 LRP10Q7Z4F1 713 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 METTL22Q9BUU2 404 aaPredicted RBP14.11□□□□□ -0.15
LINC01278-204ENST00000609143 UTYO14607 1347 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 CASC1Q6TDU7 716 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 TMOD3Q9NYL9 352 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 DISP2A7MBM2 1401 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 TNS2Q63HR2 1409 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 TOGARAM1Q9Y4F4 1720 aa14.11□□□□□ -0.15
LINC01278-204ENST00000609143 RBM25P49756 843 aaKnown RBP14.11□□□□□ -0.15
LINC01278-204ENST00000609143 SDSP20132 328 aa14.1□□□□□ -0.15
LINC01278-204ENST00000609143 MX1P20591 662 aa14.1□□□□□ -0.15
LINC01278-204ENST00000609143 SALL3Q9BXA9 1300 aa14.1□□□□□ -0.15
LINC01278-204ENST00000609143 IGKV5-2P06315 115 aa14.1□□□□□ -0.15
LINC01278-204ENST00000609143 KIF1BPQ96EK5 621 aa14.1□□□□□ -0.15
LINC01278-204ENST00000609143 NEURL1BA8MQ27 555 aa14.09□□□□□ -0.15
LINC01278-204ENST00000609143 MYD88Q99836 296 aa14.09□□□□□ -0.15
LINC01278-204ENST00000609143 TOM1O60784 492 aa14.09□□□□□ -0.15
LINC01278-204ENST00000609143 PIP4K2AP48426 406 aaPredicted RBP14.09□□□□□ -0.15
LINC01278-204ENST00000609143 ARFGEF2Q9Y6D5 1785 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 PTCD1O75127 700 aaKnown RBP14.08□□□□□ -0.16
LINC01278-204ENST00000609143 GCKRQ14397 625 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 RHPN1Q8TCX5 695 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 AOX1Q06278 1338 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 PLBD2Q8NHP8 589 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 SUCLG2Q96I99 432 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 STAP2Q9UGK3 403 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.16
LINC01278-204ENST00000609143 OS9Q13438 667 aaPredicted RBP14.07□□□□□ -0.16
LINC01278-204ENST00000609143 IL1RAPL2Q9NP60 686 aa14.07□□□□□ -0.16
LINC01278-204ENST00000609143 NBPF26B4DH59 902 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms