RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
ZNF558-207ENST00000601372 ANXA1P04083 346 aa13.22□□□□□ -0.29
ZNF558-207ENST00000601372 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
ZNF558-207ENST00000601372 GOLGA6L19H0YKK7 550 aa13.22□□□□□ -0.29
ZNF558-207ENST00000601372 MTHFSDQ2M296 383 aaKnown RBP13.22□□□□□ -0.29
ZNF558-207ENST00000601372 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
ZNF558-207ENST00000601372 RIMS1Q86UR5 1692 aaKnown RBP13.22□□□□□ -0.29
ZNF558-207ENST00000601372 NUTM1Q86Y26 1132 aa13.22□□□□□ -0.29
ZNF558-207ENST00000601372 BAG6P46379 1132 aa13.21□□□□□ -0.29
ZNF558-207ENST00000601372 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.29
ZNF558-207ENST00000601372 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
ZNF558-207ENST00000601372 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
ZNF558-207ENST00000601372 TET3O43151 1660 aa13.21□□□□□ -0.29
ZNF558-207ENST00000601372 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
ZNF558-207ENST00000601372 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
ZNF558-207ENST00000601372 PER1O15534 1290 aaPredicted RBP13.21□□□□□ -0.3
ZNF558-207ENST00000601372 NIP7Q9Y221 180 aaKnown RBP eCLIP13.21□□□□□ -0.3
ZNF558-207ENST00000601372 TRAPPC3LQ5T215 181 aa13.2□□□□□ -0.3
ZNF558-207ENST00000601372 ARAP3Q8WWN8 1544 aa13.2□□□□□ -0.3
ZNF558-207ENST00000601372 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
ZNF558-207ENST00000601372 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
ZNF558-207ENST00000601372 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
ZNF558-207ENST00000601372 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
ZNF558-207ENST00000601372 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
ZNF558-207ENST00000601372 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
ZNF558-207ENST00000601372 KDM5AP29375 1690 aaKnown RBP13.2□□□□□ -0.3
ZNF558-207ENST00000601372 BECN2A8MW95 431 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 STK3Q13188 491 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 PIK3C2GO75747 1445 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 RLBP1P12271 317 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
ZNF558-207ENST00000601372 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
ZNF558-207ENST00000601372 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
ZNF558-207ENST00000601372 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 PLXNC1O60486 1568 aa13.19□□□□□ -0.3
ZNF558-207ENST00000601372 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
ZNF558-207ENST00000601372 FIBPO43427 364 aa13.18□□□□□ -0.3
ZNF558-207ENST00000601372 SEC24BO95487 1268 aa13.18□□□□□ -0.3
ZNF558-207ENST00000601372 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
ZNF558-207ENST00000601372 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.18□□□□□ -0.3
ZNF558-207ENST00000601372 MPHOSPH10O00566 681 aaKnown RBP13.18□□□□□ -0.3
ZNF558-207ENST00000601372 SLC5A1P13866 664 aa13.18□□□□□ -0.3
ZNF558-207ENST00000601372 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
ZNF558-207ENST00000601372 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
ZNF558-207ENST00000601372 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.18□□□□□ -0.3
ZNF558-207ENST00000601372 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
ZNF558-207ENST00000601372 HIP1O00291 1037 aa13.18□□□□□ -0.3
ZNF558-207ENST00000601372 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
ZNF558-207ENST00000601372 FLIIQ13045 1269 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 DZIP1Q86YF9 867 aaKnown RBP13.17□□□□□ -0.3
ZNF558-207ENST00000601372 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 ZMYM4Q5VZL5 1548 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 SBNO1A3KN83 1393 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
ZNF558-207ENST00000601372 TSHZ3Q63HK5 1081 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 XAGE3Q8WTP9 111 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 SSFA2P28290 1259 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
ZNF558-207ENST00000601372 DIP2BQ9P265 1576 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 CCDC173Q0VFZ6 552 aa13.17□□□□□ -0.3
ZNF558-207ENST00000601372 RBM10P98175 930 aaKnown RBP13.16□□□□□ -0.3
ZNF558-207ENST00000601372 CCDC152Q4G0S7 254 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
ZNF558-207ENST00000601372 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
ZNF558-207ENST00000601372 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
ZNF558-207ENST00000601372 USP5P45974 858 aa13.15□□□□□ -0.3
ZNF558-207ENST00000601372 TDO2P48775 406 aa13.15□□□□□ -0.3
ZNF558-207ENST00000601372 SPHKAPQ2M3C7 1700 aa13.15□□□□□ -0.3
ZNF558-207ENST00000601372 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
ZNF558-207ENST00000601372 SPC24Q8NBT2 197 aa13.15□□□□□ -0.3
ZNF558-207ENST00000601372 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
ZNF558-207ENST00000601372 PIK3R4Q99570 1358 aa13.15□□□□□ -0.3
ZNF558-207ENST00000601372 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
ZNF558-207ENST00000601372 NLRP3Q96P20 1036 aa13.15□□□□□ -0.31
ZNF558-207ENST00000601372 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
ZNF558-207ENST00000601372 CROCC2H7BZ55 1655 aa13.14□□□□□ -0.31
ZNF558-207ENST00000601372 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
ZNF558-207ENST00000601372 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
ZNF558-207ENST00000601372 LDHAL6AQ6ZMR3 332 aa13.13□□□□□ -0.31
ZNF558-207ENST00000601372 GRM1Q13255 1194 aa13.13□□□□□ -0.31
ZNF558-207ENST00000601372 PTPRCP08575 1304 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms