RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
SMG9-210ENST00000600097 PER1O15534 1290 aaPredicted RBP23.25■■□□□ 1.31
SMG9-210ENST00000600097 COL15A1P39059 1388 aa23.25■■□□□ 1.31
SMG9-210ENST00000600097 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
SMG9-210ENST00000600097 RBM46Q8TBY0 533 aaKnown RBP23.24■■□□□ 1.31
SMG9-210ENST00000600097 RNF181Q9P0P0 153 aa23.24■■□□□ 1.31
SMG9-210ENST00000600097 ZBTB1Q9Y2K1 713 aa23.24■■□□□ 1.31
SMG9-210ENST00000600097 KDM2BQ8NHM5 1336 aa23.24■■□□□ 1.31
SMG9-210ENST00000600097 KCPQ6ZWJ8 1503 aa23.23■■□□□ 1.31
SMG9-210ENST00000600097 NFIXQ14938 502 aa23.23■■□□□ 1.31
SMG9-210ENST00000600097 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
SMG9-210ENST00000600097 STARD3NLO95772 234 aa23.21■■□□□ 1.31
SMG9-210ENST00000600097 TTC5Q8N0Z6 440 aa23.21■■□□□ 1.31
SMG9-210ENST00000600097 SERPINB2P05120 415 aa23.2■■□□□ 1.3
SMG9-210ENST00000600097 BCL2L12Q9HB09 334 aa23.19■■□□□ 1.3
SMG9-210ENST00000600097 ZC3H4Q9UPT8 1303 aaKnown RBP23.18■■□□□ 1.3
SMG9-210ENST00000600097 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
SMG9-210ENST00000600097 FSTL1Q12841 308 aa23.18■■□□□ 1.3
SMG9-210ENST00000600097 DNAJC5GQ8N7S2 189 aa23.18■■□□□ 1.3
SMG9-210ENST00000600097 NPC1L1Q9UHC9 1359 aa23.17■■□□□ 1.3
SMG9-210ENST00000600097 A0A087WZG4 1122 aa23.17■■□□□ 1.3
SMG9-210ENST00000600097 TEFQ10587 303 aa23.17■■□□□ 1.3
SMG9-210ENST00000600097 GAS2L2Q8NHY3 880 aa23.17■■□□□ 1.3
SMG9-210ENST00000600097 TEX13AQ9BXU3 409 aaPredicted RBP23.17■■□□□ 1.3
SMG9-210ENST00000600097 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
SMG9-210ENST00000600097 EIF5P55010 431 aaKnown RBP23.16■■□□□ 1.3
SMG9-210ENST00000600097 TTLL6Q8N841 843 aa23.16■■□□□ 1.3
SMG9-210ENST00000600097 U2SURPO15042 1029 aaKnown RBP23.15■■□□□ 1.3
SMG9-210ENST00000600097 RRAGCQ9HB90 399 aa23.15■■□□□ 1.3
SMG9-210ENST00000600097 NRXN2Q9P2S2 1712 aa23.15■■□□□ 1.3
SMG9-210ENST00000600097 H0YIN7 160 aa23.14■■□□□ 1.29
SMG9-210ENST00000600097 LMNB1P20700 586 aa23.14■■□□□ 1.29
SMG9-210ENST00000600097 ZNF790Q6PG37 636 aa23.14■■□□□ 1.29
SMG9-210ENST00000600097 UBR2Q8IWV8 1755 aa23.14■■□□□ 1.29
SMG9-210ENST00000600097 VIRMAQ69YN4 1812 aaKnown RBP23.13■■□□□ 1.29
SMG9-210ENST00000600097 C2CD5Q86YS7 1000 aa23.13■■□□□ 1.29
SMG9-210ENST00000600097 IL17REQ8NFR9 667 aa23.13■■□□□ 1.29
SMG9-210ENST00000600097 ZNF496Q96IT1 587 aaPredicted RBP23.13■■□□□ 1.29
SMG9-210ENST00000600097 HEG1Q9ULI3 1381 aa23.13■■□□□ 1.29
SMG9-210ENST00000600097 AFDNP55196 1824 aaKnown RBP23.12■■□□□ 1.29
SMG9-210ENST00000600097 COL3A1P02461 1466 aaPredicted RBP23.12■■□□□ 1.29
SMG9-210ENST00000600097 RASSF7Q02833 373 aa23.12■■□□□ 1.29
SMG9-210ENST00000600097 BICDL1Q6ZP65 573 aa23.12■■□□□ 1.29
SMG9-210ENST00000600097 PDZRN3Q9UPQ7 1066 aa23.12■■□□□ 1.29
SMG9-210ENST00000600097 SBF1O95248 1867 aa23.11■■□□□ 1.29
SMG9-210ENST00000600097 IL6STP40189 918 aaPredicted RBP23.1■■□□□ 1.29
SMG9-210ENST00000600097 TNRC6CQ9HCJ0 1690 aaKnown RBP23.09■■□□□ 1.29
SMG9-210ENST00000600097 NPM2Q86SE8 214 aaKnown RBP23.09■■□□□ 1.29
SMG9-210ENST00000600097 SMC1BQ8NDV3 1235 aa23.09■■□□□ 1.29
SMG9-210ENST00000600097 FMNL2Q96PY5 1086 aa23.09■■□□□ 1.29
SMG9-210ENST00000600097 CARMIL3Q8ND23 1372 aa23.09■■□□□ 1.29
SMG9-210ENST00000600097 GLTPD2A6NH11 291 aa23.08■■□□□ 1.29
SMG9-210ENST00000600097 PDE6BP35913 854 aa23.08■■□□□ 1.29
SMG9-210ENST00000600097 TBC1D9BQ66K14 1250 aa23.08■■□□□ 1.29
SMG9-210ENST00000600097 KLRG1Q96E93 195 aa23.08■■□□□ 1.29
SMG9-210ENST00000600097 BRIP1Q9BX63 1249 aa23.08■■□□□ 1.29
SMG9-210ENST00000600097 ZNF330Q9Y3S2 320 aaPredicted RBP23.08■■□□□ 1.29
SMG9-210ENST00000600097 WDR90Q96KV7 1748 aa23.08■■□□□ 1.28
SMG9-210ENST00000600097 DLEC1Q9Y238 1755 aa23.07■■□□□ 1.28
SMG9-210ENST00000600097 CEMIPQ8WUJ3 1361 aa23.07■■□□□ 1.28
SMG9-210ENST00000600097 VEGFAP15692 232 aaPredicted RBP23.07■■□□□ 1.28
SMG9-210ENST00000600097 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
SMG9-210ENST00000600097 TBC1D2BQ9UPU7 963 aa23.07■■□□□ 1.28
SMG9-210ENST00000600097 PRELPP51888 382 aa23.06■■□□□ 1.28
SMG9-210ENST00000600097 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
SMG9-210ENST00000600097 NFKBIEO00221 500 aa23.05■■□□□ 1.28
SMG9-210ENST00000600097 HTRA3P83110 453 aa23.04■■□□□ 1.28
SMG9-210ENST00000600097 PRR5LQ6MZQ0 368 aa23.04■■□□□ 1.28
SMG9-210ENST00000600097 JMYQ8N9B5 988 aa23.04■■□□□ 1.28
SMG9-210ENST00000600097 ZNF622Q969S3 477 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMG9-210ENST00000600097 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
SMG9-210ENST00000600097 A1BGP04217 495 aa23.03■■□□□ 1.28
SMG9-210ENST00000600097 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
SMG9-210ENST00000600097 SETDB2Q96T68 719 aa23.03■■□□□ 1.28
SMG9-210ENST00000600097 DPY19L2Q6NUT2 758 aa23.02■■□□□ 1.28
SMG9-210ENST00000600097 PHACTR3Q96KR7 559 aa23.02■■□□□ 1.28
SMG9-210ENST00000600097 RSPH6AQ9H0K4 717 aa23.02■■□□□ 1.28
SMG9-210ENST00000600097 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
SMG9-210ENST00000600097 SCN7AQ01118 1682 aa23.02■■□□□ 1.28
SMG9-210ENST00000600097 NPHP1O15259 732 aa23.01■■□□□ 1.27
SMG9-210ENST00000600097 CAMTA2O94983 1202 aa23.01■■□□□ 1.27
SMG9-210ENST00000600097 CNBD1Q8NA66 436 aa23.01■■□□□ 1.27
SMG9-210ENST00000600097 SIPA1L3O60292 1781 aaPredicted RBP23.01■■□□□ 1.27
SMG9-210ENST00000600097 C21orf2O43822 256 aa23■■□□□ 1.27
SMG9-210ENST00000600097 KCNQ3O43525 872 aa22.99■■□□□ 1.27
SMG9-210ENST00000600097 ST5P78524 1137 aa22.99■■□□□ 1.27
SMG9-210ENST00000600097 DZIP3Q86Y13 1208 aaKnown RBP22.99■■□□□ 1.27
SMG9-210ENST00000600097 CNKSR1Q969H4 720 aa22.99■■□□□ 1.27
SMG9-210ENST00000600097 ERFEQ4G0M1 354 aa22.98■■□□□ 1.27
SMG9-210ENST00000600097 CCDC24Q8N4L8 307 aa22.98■■□□□ 1.27
SMG9-210ENST00000600097 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
SMG9-210ENST00000600097 LTBP3Q9NS15 1303 aa22.98■■□□□ 1.27
SMG9-210ENST00000600097 ANKRD31Q8N7Z5 1873 aa22.97■■□□□ 1.27
SMG9-210ENST00000600097 SOGA3Q5TF21 947 aa22.97■■□□□ 1.27
SMG9-210ENST00000600097 STYK1Q6J9G0 422 aa22.97■■□□□ 1.27
SMG9-210ENST00000600097 CLEC4GQ6UXB4 293 aa22.97■■□□□ 1.27
SMG9-210ENST00000600097 ZNF219Q9P2Y4 722 aaPredicted RBP22.97■■□□□ 1.27
SMG9-210ENST00000600097 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
SMG9-210ENST00000600097 SNRPA1P09661 255 aaKnown RBP22.96■■□□□ 1.27
SMG9-210ENST00000600097 TAOK3Q9H2K8 898 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms