RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 CEP135Q66GS9 1140 aa27.26■■□□□ 1.95
SIN3B-209ENST00000596802 PLA2G4DQ86XP0 818 aa27.26■■□□□ 1.95
SIN3B-209ENST00000596802 UNC5CLQ8IV45 518 aa27.26■■□□□ 1.95
SIN3B-209ENST00000596802 ZNF215Q9UL58 517 aaPredicted RBP27.26■■□□□ 1.95
SIN3B-209ENST00000596802 SMC3Q9UQE7 1217 aa27.26■■□□□ 1.95
SIN3B-209ENST00000596802 CFAP65Q6ZU64 1925 aaKnown RBP27.25■■□□□ 1.95
SIN3B-209ENST00000596802 PTPRCP08575 1304 aa27.25■■□□□ 1.95
SIN3B-209ENST00000596802 ZNF75DP51815 510 aa27.25■■□□□ 1.95
SIN3B-209ENST00000596802 FBXO38Q6PIJ6 1188 aa27.25■■□□□ 1.95
SIN3B-209ENST00000596802 ST7Q9NRC1 585 aa27.25■■□□□ 1.95
SIN3B-209ENST00000596802 NPATQ14207 1427 aa27.25■■□□□ 1.95
SIN3B-209ENST00000596802 AK2P54819 239 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 MAP3K11Q16584 847 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 CACTINQ8WUQ7 758 aaKnown RBP27.24■■□□□ 1.95
SIN3B-209ENST00000596802 ZNF592Q92610 1267 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 LARP6Q9BRS8 491 aaKnown RBP27.24■■□□□ 1.95
SIN3B-209ENST00000596802 EPB41L2O43491 1005 aaKnown RBP27.24■■□□□ 1.95
SIN3B-209ENST00000596802 FAM193AP78312 1265 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 RUFY3Q7L099 469 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 HDGFL2Q7Z4V5 671 aaPredicted RBP27.24■■□□□ 1.95
SIN3B-209ENST00000596802 CBX8Q9HC52 389 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 MTMR6Q9Y217 621 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 FRMPD1Q5SYB0 1578 aa27.24■■□□□ 1.95
SIN3B-209ENST00000596802 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.23■■□□□ 1.95
SIN3B-209ENST00000596802 IL13P35225 146 aa27.23■■□□□ 1.95
SIN3B-209ENST00000596802 MAPK8IP2Q13387 824 aaPredicted RBP27.23■■□□□ 1.95
SIN3B-209ENST00000596802 TRIM5Q9C035 493 aa27.23■■□□□ 1.95
SIN3B-209ENST00000596802 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.23■■□□□ 1.95
SIN3B-209ENST00000596802 V9GYY5 206 aaPredicted RBP27.23■■□□□ 1.95
SIN3B-209ENST00000596802 LIMCH1Q9UPQ0 1083 aa27.22■■□□□ 1.95
SIN3B-209ENST00000596802 LRRCC1Q9C099 1032 aa27.22■■□□□ 1.95
SIN3B-209ENST00000596802 NUP62CLQ9H1M0 184 aa27.22■■□□□ 1.95
SIN3B-209ENST00000596802 CAMK4Q16566 473 aa27.21■■□□□ 1.95
SIN3B-209ENST00000596802 CREBRFQ8IUR6 639 aa27.21■■□□□ 1.95
SIN3B-209ENST00000596802 STK26Q9P289 416 aa27.21■■□□□ 1.95
SIN3B-209ENST00000596802 SNX14Q9Y5W7 946 aa27.21■■□□□ 1.95
SIN3B-209ENST00000596802 ANO6Q4KMQ2 910 aa27.2■■□□□ 1.95
SIN3B-209ENST00000596802 MINK1Q8N4C8 1332 aaPredicted RBP27.2■■□□□ 1.95
SIN3B-209ENST00000596802 RAD50Q92878 1312 aa27.2■■□□□ 1.94
SIN3B-209ENST00000596802 ELF2Q15723 593 aa27.19■■□□□ 1.94
SIN3B-209ENST00000596802 CCDC144BQ3MJ40 725 aa27.19■■□□□ 1.94
SIN3B-209ENST00000596802 SLFNL1Q499Z3 407 aa27.19■■□□□ 1.94
SIN3B-209ENST00000596802 CCDC144CPQ8IYA2 1237 aa27.19■■□□□ 1.94
SIN3B-209ENST00000596802 STAP2Q9UGK3 403 aa27.19■■□□□ 1.94
SIN3B-209ENST00000596802 MAP2P11137 1827 aaKnown RBP27.19■■□□□ 1.94
SIN3B-209ENST00000596802 LIG1P18858 919 aa27.19■■□□□ 1.94
SIN3B-209ENST00000596802 HAP1P54257 671 aaPredicted RBP27.19■■□□□ 1.94
SIN3B-209ENST00000596802 KIF1BPQ96EK5 621 aa27.19■■□□□ 1.94
SIN3B-209ENST00000596802 LARGE1O95461 756 aa27.18■■□□□ 1.94
SIN3B-209ENST00000596802 EMILIN1Q9Y6C2 1016 aa27.18■■□□□ 1.94
SIN3B-209ENST00000596802 CDK12Q9NYV4 1490 aaPredicted RBP27.18■■□□□ 1.94
SIN3B-209ENST00000596802 ERBB3P21860 1342 aa27.18■■□□□ 1.94
SIN3B-209ENST00000596802 VGFO15240 615 aaPredicted RBP27.18■■□□□ 1.94
SIN3B-209ENST00000596802 DTNBO60941 627 aa27.18■■□□□ 1.94
SIN3B-209ENST00000596802 GJB2P29033 226 aa27.18■■□□□ 1.94
SIN3B-209ENST00000596802 TDRD7Q8NHU6 1098 aaKnown RBP27.18■■□□□ 1.94
SIN3B-209ENST00000596802 ZNF446Q9NWS9 450 aa27.18■■□□□ 1.94
SIN3B-209ENST00000596802 CLTCQ00610 1675 aaKnown RBP27.18■■□□□ 1.94
SIN3B-209ENST00000596802 USP27XA6NNY8 438 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 TTC6Q86TZ1 520 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 RTF1Q92541 710 aaKnown RBP27.17■■□□□ 1.94
SIN3B-209ENST00000596802 ERO1AQ96HE7 468 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 CLIP2Q9UDT6 1046 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 CHMP3Q9Y3E7 222 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 YTHDC2Q9H6S0 1430 aaKnown RBP27.17■■□□□ 1.94
SIN3B-209ENST00000596802 NYAP1Q6ZVC0 841 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.17■■□□□ 1.94
SIN3B-209ENST00000596802 CKAP2LQ8IYA6 745 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 CCDC171Q6TFL3 1326 aa27.17■■□□□ 1.94
SIN3B-209ENST00000596802 CYP2C19P33261 490 aa27.16■■□□□ 1.94
SIN3B-209ENST00000596802 RASEFQ8IZ41 740 aa27.16■■□□□ 1.94
SIN3B-209ENST00000596802 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
SIN3B-209ENST00000596802 CABP1Q9NZU7 370 aa27.15■■□□□ 1.94
SIN3B-209ENST00000596802 PTPRMP28827 1452 aa27.14■■□□□ 1.94
SIN3B-209ENST00000596802 CCDC83Q8IWF9 413 aa27.14■■□□□ 1.94
SIN3B-209ENST00000596802 AEBP1Q8IUX7 1158 aa27.14■■□□□ 1.94
SIN3B-209ENST00000596802 TNMDQ9H2S6 317 aa27.14■■□□□ 1.94
SIN3B-209ENST00000596802 PTPN14Q15678 1187 aa27.13■■□□□ 1.93
SIN3B-209ENST00000596802 NOL10Q9BSC4 688 aaKnown RBP27.13■■□□□ 1.93
SIN3B-209ENST00000596802 VPS37CA5D8V6 355 aaPredicted RBP27.13■■□□□ 1.93
SIN3B-209ENST00000596802 GNAI2P04899 355 aa27.13■■□□□ 1.93
SIN3B-209ENST00000596802 SLC4A10Q6U841 1118 aa27.13■■□□□ 1.93
SIN3B-209ENST00000596802 LRRC8AQ8IWT6 810 aa27.13■■□□□ 1.93
SIN3B-209ENST00000596802 HNRNPH2P55795 449 aaKnown RBP27.12■■□□□ 1.93
SIN3B-209ENST00000596802 F6X3S4 739 aa27.12■■□□□ 1.93
SIN3B-209ENST00000596802 SLC4A2P04920 1241 aa27.12■■□□□ 1.93
SIN3B-209ENST00000596802 DACT1Q9NYF0 836 aa27.12■■□□□ 1.93
SIN3B-209ENST00000596802 CDC25BP30305 580 aa27.11■■□□□ 1.93
SIN3B-209ENST00000596802 RBM43Q6ZSC3 357 aaKnown RBP27.11■■□□□ 1.93
SIN3B-209ENST00000596802 TRIM34Q9BYJ4 488 aa27.11■■□□□ 1.93
SIN3B-209ENST00000596802 CHL1O00533 1208 aa27.11■■□□□ 1.93
SIN3B-209ENST00000596802 CPA1P15085 419 aa27.11■■□□□ 1.93
SIN3B-209ENST00000596802 TSPYL1Q9H0U9 437 aa27.11■■□□□ 1.93
SIN3B-209ENST00000596802 ELP1O95163 1332 aa27.11■■□□□ 1.93
SIN3B-209ENST00000596802 PNMA6EA0A0J9YXQ4 647 aa27.1■■□□□ 1.93
SIN3B-209ENST00000596802 SGSM2O43147 1006 aa27.1■■□□□ 1.93
SIN3B-209ENST00000596802 ARID5BQ14865 1188 aa27.1■■□□□ 1.93
SIN3B-209ENST00000596802 TRERF1Q96PN7 1200 aa27.1■■□□□ 1.93
SIN3B-209ENST00000596802 PRAM1Q96QH2 718 aa27.1■■□□□ 1.93
SIN3B-209ENST00000596802 HYPKQ9NX55 129 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms