RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 NKX1-1Q15270 411 aaPredicted RBP18.15■□□□□ 0.5
PAF1-204ENST00000595564 BEND3Q5T5X7 828 aa18.15■□□□□ 0.5
PAF1-204ENST00000595564 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
PAF1-204ENST00000595564 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.5
PAF1-204ENST00000595564 SEC24BO95487 1268 aa18.14■□□□□ 0.5
PAF1-204ENST00000595564 SNRPA1P09661 255 aaKnown RBP18.14■□□□□ 0.5
PAF1-204ENST00000595564 UBTFL1P0CB47 393 aaPredicted RBP18.14■□□□□ 0.5
PAF1-204ENST00000595564 PDIA6Q15084 440 aa18.14■□□□□ 0.49
PAF1-204ENST00000595564 LRRFIP2Q9Y608 721 aaKnown RBP18.14■□□□□ 0.49
PAF1-204ENST00000595564 PHLPP1O60346 1717 aa18.14■□□□□ 0.49
PAF1-204ENST00000595564 COL16A1Q07092 1604 aaPredicted RBP18.13■□□□□ 0.49
PAF1-204ENST00000595564 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
PAF1-204ENST00000595564 KSR2Q6VAB6 950 aa18.13■□□□□ 0.49
PAF1-204ENST00000595564 MAP3K2Q9Y2U5 619 aa18.13■□□□□ 0.49
PAF1-204ENST00000595564 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
PAF1-204ENST00000595564 APBB1O00213 710 aa18.12■□□□□ 0.49
PAF1-204ENST00000595564 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
PAF1-204ENST00000595564 HSPA1LP34931 641 aa18.12■□□□□ 0.49
PAF1-204ENST00000595564 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
PAF1-204ENST00000595564 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
PAF1-204ENST00000595564 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
PAF1-204ENST00000595564 MYL6BP14649 208 aa18.11■□□□□ 0.49
PAF1-204ENST00000595564 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
PAF1-204ENST00000595564 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
PAF1-204ENST00000595564 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
PAF1-204ENST00000595564 PNMA6EA0A0J9YXQ4 647 aa18.09■□□□□ 0.49
PAF1-204ENST00000595564 SMARCA5O60264 1052 aaPredicted RBP18.09■□□□□ 0.49
PAF1-204ENST00000595564 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
PAF1-204ENST00000595564 ADAMTS2O95450 1211 aa18.09■□□□□ 0.49
PAF1-204ENST00000595564 NBPF7P0C2Y1 421 aaPredicted RBP18.09■□□□□ 0.49
PAF1-204ENST00000595564 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
PAF1-204ENST00000595564 PLEKHM2Q8IWE5 1019 aa18.08■□□□□ 0.48
PAF1-204ENST00000595564 XAGE3Q8WTP9 111 aa18.08■□□□□ 0.48
PAF1-204ENST00000595564 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.48
PAF1-204ENST00000595564 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
PAF1-204ENST00000595564 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
PAF1-204ENST00000595564 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
PAF1-204ENST00000595564 GLI3P10071 1580 aa18.07■□□□□ 0.48
PAF1-204ENST00000595564 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
PAF1-204ENST00000595564 DISP2A7MBM2 1401 aa18.07■□□□□ 0.48
PAF1-204ENST00000595564 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
PAF1-204ENST00000595564 CWF19L2Q2TBE0 894 aaKnown RBP18.06■□□□□ 0.48
PAF1-204ENST00000595564 LINS1Q8NG48 757 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 TMOD3Q9NYL9 352 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 C9orf78Q9NZ63 289 aaPredicted RBP18.05■□□□□ 0.48
PAF1-204ENST00000595564 LAMB4A4D0S4 1761 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 TOGARAM1Q9Y4F4 1720 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
PAF1-204ENST00000595564 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
PAF1-204ENST00000595564 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 PPP1R42Q7Z4L9 355 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
PAF1-204ENST00000595564 OTUD7AQ8TE49 926 aaPredicted RBP18.05■□□□□ 0.48
PAF1-204ENST00000595564 SSH3Q8TE77 659 aa18.05■□□□□ 0.48
PAF1-204ENST00000595564 PLCH1Q4KWH8 1693 aa18.04■□□□□ 0.48
PAF1-204ENST00000595564 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
PAF1-204ENST00000595564 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
PAF1-204ENST00000595564 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
PAF1-204ENST00000595564 EXOC5O00471 708 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 SRGAP3O43295 1099 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
PAF1-204ENST00000595564 NEXNQ0ZGT2 675 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 POLA2Q14181 598 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 TTC22Q5TAA0 569 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 LRRCC1Q9C099 1032 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 IBTKQ9P2D0 1353 aaPredicted RBP18.02■□□□□ 0.48
PAF1-204ENST00000595564 TNS2Q63HR2 1409 aa18.02■□□□□ 0.48
PAF1-204ENST00000595564 GSPT1P15170 499 aaKnown RBP18.02■□□□□ 0.47
PAF1-204ENST00000595564 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.47
PAF1-204ENST00000595564 HDAC5Q9UQL6 1122 aa18.02■□□□□ 0.47
PAF1-204ENST00000595564 ERBB4Q15303 1308 aa18.02■□□□□ 0.47
PAF1-204ENST00000595564 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
PAF1-204ENST00000595564 MYD88Q99836 296 aa18.01■□□□□ 0.47
PAF1-204ENST00000595564 METTL22Q9BUU2 404 aaPredicted RBP18.01■□□□□ 0.47
PAF1-204ENST00000595564 GRM8O00222 908 aa18■□□□□ 0.47
PAF1-204ENST00000595564 PIGBQ92521 554 aa18■□□□□ 0.47
PAF1-204ENST00000595564 NBPF26B4DH59 902 aa18■□□□□ 0.47
PAF1-204ENST00000595564 SURF6O75683 361 aaKnown RBP18■□□□□ 0.47
PAF1-204ENST00000595564 NBPF14Q5TI25 921 aa18■□□□□ 0.47
PAF1-204ENST00000595564 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
PAF1-204ENST00000595564 NBPF15Q8N660 670 aa18■□□□□ 0.47
PAF1-204ENST00000595564 NRAPQ86VF7 1730 aa18■□□□□ 0.47
PAF1-204ENST00000595564 WNK3Q9BYP7 1800 aa17.99■□□□□ 0.47
PAF1-204ENST00000595564 UTYO14607 1347 aa17.99■□□□□ 0.47
PAF1-204ENST00000595564 SPATA31A1Q5TZJ5 1347 aa17.99■□□□□ 0.47
PAF1-204ENST00000595564 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
PAF1-204ENST00000595564 CDCA7Q9BWT1 371 aaPredicted RBP17.98■□□□□ 0.47
PAF1-204ENST00000595564 RAB11FIP3O75154 756 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 CDC45O75419 566 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 A1BGP04217 495 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 MTX1Q13505 466 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 TBC1D9Q6ZT07 1266 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
PAF1-204ENST00000595564 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
PAF1-204ENST00000595564 THRAP3Q9Y2W1 955 aaKnown RBP17.98■□□□□ 0.47
PAF1-204ENST00000595564 GCKRQ14397 625 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms