RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
PDE4C-208ENST00000595343 NFIXQ14938 502 aa25.27■■□□□ 1.64
PDE4C-208ENST00000595343 C16orf71Q8IYS4 520 aaPredicted RBP25.27■■□□□ 1.64
PDE4C-208ENST00000595343 CCER1Q8TC90 406 aaPredicted RBP25.27■■□□□ 1.64
PDE4C-208ENST00000595343 ZBTB1Q9Y2K1 713 aa25.27■■□□□ 1.64
PDE4C-208ENST00000595343 KDM2BQ8NHM5 1336 aa25.27■■□□□ 1.64
PDE4C-208ENST00000595343 COL15A1P39059 1388 aa25.27■■□□□ 1.64
PDE4C-208ENST00000595343 KIF7Q2M1P5 1343 aa25.26■■□□□ 1.63
PDE4C-208ENST00000595343 VIRMAQ69YN4 1812 aaKnown RBP25.26■■□□□ 1.63
PDE4C-208ENST00000595343 VSIG10Q8N0Z9 540 aa25.25■■□□□ 1.63
PDE4C-208ENST00000595343 DIAPH1O60610 1272 aaKnown RBP25.24■■□□□ 1.63
PDE4C-208ENST00000595343 BCL2L12Q9HB09 334 aa25.24■■□□□ 1.63
PDE4C-208ENST00000595343 SBF1O95248 1867 aa25.23■■□□□ 1.63
PDE4C-208ENST00000595343 AFDNP55196 1824 aaKnown RBP25.23■■□□□ 1.63
PDE4C-208ENST00000595343 PER1O15534 1290 aaPredicted RBP25.22■■□□□ 1.63
PDE4C-208ENST00000595343 FSTL1Q12841 308 aa25.22■■□□□ 1.63
PDE4C-208ENST00000595343 RRAGCQ9HB90 399 aa25.22■■□□□ 1.63
PDE4C-208ENST00000595343 NRXN2Q9P2S2 1712 aa25.22■■□□□ 1.63
PDE4C-208ENST00000595343 SERPINB2P05120 415 aa25.21■■□□□ 1.63
PDE4C-208ENST00000595343 CC2D1BQ5T0F9 858 aaKnown RBP25.21■■□□□ 1.63
PDE4C-208ENST00000595343 WDR90Q96KV7 1748 aa25.2■■□□□ 1.63
PDE4C-208ENST00000595343 CANXP27824 592 aaKnown RBP25.2■■□□□ 1.62
PDE4C-208ENST00000595343 RASSF7Q02833 373 aa25.2■■□□□ 1.62
PDE4C-208ENST00000595343 UBR2Q8IWV8 1755 aa25.18■■□□□ 1.62
PDE4C-208ENST00000595343 HTRA3P83110 453 aa25.18■■□□□ 1.62
PDE4C-208ENST00000595343 TTC5Q8N0Z6 440 aa25.18■■□□□ 1.62
PDE4C-208ENST00000595343 ZC3H4Q9UPT8 1303 aaKnown RBP25.17■■□□□ 1.62
PDE4C-208ENST00000595343 TNRC6CQ9HCJ0 1690 aaKnown RBP25.17■■□□□ 1.62
PDE4C-208ENST00000595343 STARD3NLO95772 234 aa25.17■■□□□ 1.62
PDE4C-208ENST00000595343 EIF5P55010 431 aaKnown RBP25.17■■□□□ 1.62
PDE4C-208ENST00000595343 TTLL6Q8N841 843 aa25.17■■□□□ 1.62
PDE4C-208ENST00000595343 DLEC1Q9Y238 1755 aa25.16■■□□□ 1.62
PDE4C-208ENST00000595343 C2CD5Q86YS7 1000 aa25.16■■□□□ 1.62
PDE4C-208ENST00000595343 LMNB1P20700 586 aa25.15■■□□□ 1.62
PDE4C-208ENST00000595343 PRELPP51888 382 aa25.15■■□□□ 1.62
PDE4C-208ENST00000595343 BICDL1Q6ZP65 573 aa25.15■■□□□ 1.62
PDE4C-208ENST00000595343 CARMIL3Q8ND23 1372 aa25.15■■□□□ 1.62
PDE4C-208ENST00000595343 A0A087WZG4 1122 aa25.14■■□□□ 1.62
PDE4C-208ENST00000595343 H0YIN7 160 aa25.14■■□□□ 1.62
PDE4C-208ENST00000595343 KLRG1Q96E93 195 aa25.14■■□□□ 1.62
PDE4C-208ENST00000595343 ZNF496Q96IT1 587 aaPredicted RBP25.14■■□□□ 1.62
PDE4C-208ENST00000595343 TEFQ10587 303 aa25.13■■□□□ 1.61
PDE4C-208ENST00000595343 IL17REQ8NFR9 667 aa25.13■■□□□ 1.61
PDE4C-208ENST00000595343 COL3A1P02461 1466 aaPredicted RBP25.13■■□□□ 1.61
PDE4C-208ENST00000595343 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
PDE4C-208ENST00000595343 ZNF790Q6PG37 636 aa25.12■■□□□ 1.61
PDE4C-208ENST00000595343 SMC1BQ8NDV3 1235 aa25.12■■□□□ 1.61
PDE4C-208ENST00000595343 HEG1Q9ULI3 1381 aa25.11■■□□□ 1.61
PDE4C-208ENST00000595343 GLTPD2A6NH11 291 aa25.11■■□□□ 1.61
PDE4C-208ENST00000595343 GNAT3A8MTJ3 354 aa25.11■■□□□ 1.61
PDE4C-208ENST00000595343 TBC1D9BQ66K14 1250 aa25.11■■□□□ 1.61
PDE4C-208ENST00000595343 GAS2L2Q8NHY3 880 aa25.11■■□□□ 1.61
PDE4C-208ENST00000595343 NFKBIEO00221 500 aa25.1■■□□□ 1.61
PDE4C-208ENST00000595343 JMYQ8N9B5 988 aa25.1■■□□□ 1.61
PDE4C-208ENST00000595343 TEX13AQ9BXU3 409 aaPredicted RBP25.1■■□□□ 1.61
PDE4C-208ENST00000595343 NPC1L1Q9UHC9 1359 aa25.09■■□□□ 1.61
PDE4C-208ENST00000595343 VEGFAP15692 232 aaPredicted RBP25.09■■□□□ 1.61
PDE4C-208ENST00000595343 CNGB1Q14028 1251 aaPredicted RBP25.09■■□□□ 1.61
PDE4C-208ENST00000595343 TBC1D2BQ9UPU7 963 aa25.08■■□□□ 1.61
PDE4C-208ENST00000595343 ZNF330Q9Y3S2 320 aaPredicted RBP25.08■■□□□ 1.61
PDE4C-208ENST00000595343 BRIP1Q9BX63 1249 aa25.07■■□□□ 1.6
PDE4C-208ENST00000595343 SIPA1L3O60292 1781 aaPredicted RBP25.06■■□□□ 1.6
PDE4C-208ENST00000595343 IL6STP40189 918 aaPredicted RBP25.06■■□□□ 1.6
PDE4C-208ENST00000595343 PRR5LQ6MZQ0 368 aa25.06■■□□□ 1.6
PDE4C-208ENST00000595343 ZNF622Q969S3 477 aaKnown RBP eCLIP25.06■■□□□ 1.6
PDE4C-208ENST00000595343 FMNL2Q96PY5 1086 aa25.06■■□□□ 1.6
PDE4C-208ENST00000595343 PDZRN3Q9UPQ7 1066 aa25.06■■□□□ 1.6
PDE4C-208ENST00000595343 SCN7AQ01118 1682 aa25.06■■□□□ 1.6
PDE4C-208ENST00000595343 CCDC88AQ3V6T2 1871 aa25.06■■□□□ 1.6
PDE4C-208ENST00000595343 ANKRD31Q8N7Z5 1873 aa25.06■■□□□ 1.6
PDE4C-208ENST00000595343 A1BGP04217 495 aa25.05■■□□□ 1.6
PDE4C-208ENST00000595343 PDE6BP35913 854 aa25.05■■□□□ 1.6
PDE4C-208ENST00000595343 CCDC24Q8N4L8 307 aa25.05■■□□□ 1.6
PDE4C-208ENST00000595343 TIAM2Q8IVF5 1701 aa25.05■■□□□ 1.6
PDE4C-208ENST00000595343 CEMIPQ8WUJ3 1361 aa25.04■■□□□ 1.6
PDE4C-208ENST00000595343 C21orf2O43822 256 aa25.03■■□□□ 1.6
PDE4C-208ENST00000595343 ZNF219Q9P2Y4 722 aaPredicted RBP25.03■■□□□ 1.6
PDE4C-208ENST00000595343 NPM2Q86SE8 214 aaKnown RBP25.02■■□□□ 1.6
PDE4C-208ENST00000595343 PHACTR3Q96KR7 559 aa25.02■■□□□ 1.6
PDE4C-208ENST00000595343 POTECB2RU33 542 aa25.01■■□□□ 1.59
PDE4C-208ENST00000595343 KCNQ3O43525 872 aa25.01■■□□□ 1.59
PDE4C-208ENST00000595343 CAMTA2O94983 1202 aa25.01■■□□□ 1.59
PDE4C-208ENST00000595343 DPY19L2Q6NUT2 758 aa25.01■■□□□ 1.59
PDE4C-208ENST00000595343 SETDB2Q96T68 719 aa25.01■■□□□ 1.59
PDE4C-208ENST00000595343 COL11A2P13942 1736 aaPredicted RBP25■■□□□ 1.59
PDE4C-208ENST00000595343 BTBD11A6QL63 1104 aa25■■□□□ 1.59
PDE4C-208ENST00000595343 CNBD1Q8NA66 436 aa25■■□□□ 1.59
PDE4C-208ENST00000595343 PRKAR2BP31323 418 aa24.99■■□□□ 1.59
PDE4C-208ENST00000595343 COL13A1Q5TAT6 717 aaPredicted RBP24.99■■□□□ 1.59
PDE4C-208ENST00000595343 ERFEQ4G0M1 354 aa24.98■■□□□ 1.59
PDE4C-208ENST00000595343 RSPH6AQ9H0K4 717 aa24.98■■□□□ 1.59
PDE4C-208ENST00000595343 FER1L6Q2WGJ9 1857 aa24.98■■□□□ 1.59
PDE4C-208ENST00000595343 NPHP1O15259 732 aa24.97■■□□□ 1.59
PDE4C-208ENST00000595343 DZIP3Q86Y13 1208 aaKnown RBP24.97■■□□□ 1.59
PDE4C-208ENST00000595343 USP16Q9Y5T5 823 aa24.97■■□□□ 1.59
PDE4C-208ENST00000595343 LTBP3Q9NS15 1303 aa24.96■■□□□ 1.59
PDE4C-208ENST00000595343 ST5P78524 1137 aa24.96■■□□□ 1.59
PDE4C-208ENST00000595343 STYK1Q6J9G0 422 aa24.96■■□□□ 1.59
PDE4C-208ENST00000595343 CNKSR1Q969H4 720 aa24.96■■□□□ 1.59
PDE4C-208ENST00000595343 CFAP53Q96M91 514 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 307.2 ms