RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
PTPRS-206ENST00000588552 GCP02774 474 aa18.3■□□□□ 0.52
PTPRS-206ENST00000588552 UPF3BQ9BZI7 483 aaKnown RBP18.3■□□□□ 0.52
PTPRS-206ENST00000588552 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
PTPRS-206ENST00000588552 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
PTPRS-206ENST00000588552 ZNF287Q9HBT7 754 aa18.3■□□□□ 0.52
PTPRS-206ENST00000588552 R3HCC1Q9Y3T6 440 aaKnown RBP18.3■□□□□ 0.52
PTPRS-206ENST00000588552 WASF1Q92558 559 aa18.29■□□□□ 0.52
PTPRS-206ENST00000588552 POLR3DP05423 398 aaPredicted RBP18.29■□□□□ 0.52
PTPRS-206ENST00000588552 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
PTPRS-206ENST00000588552 CDC5LQ99459 802 aaKnown RBP18.29■□□□□ 0.52
PTPRS-206ENST00000588552 ZFYVE9O95405 1425 aa18.29■□□□□ 0.52
PTPRS-206ENST00000588552 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
PTPRS-206ENST00000588552 XAGE3Q8WTP9 111 aa18.29■□□□□ 0.52
PTPRS-206ENST00000588552 PRM3Q9NNZ6 103 aa18.29■□□□□ 0.52
PTPRS-206ENST00000588552 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 SPATA32Q96LK8 384 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 OFD1O75665 1012 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 SMC2O95347 1197 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 ACSBG1Q96GR2 724 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 IL2RBP14784 551 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 TNMDQ9H2S6 317 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 CCDC39Q9UFE4 941 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 COPS6Q7L5N1 327 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 FAM13BQ9NYF5 915 aa18.28■□□□□ 0.52
PTPRS-206ENST00000588552 RFC4P35249 363 aa18.27■□□□□ 0.52
PTPRS-206ENST00000588552 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
PTPRS-206ENST00000588552 PDIA4P13667 645 aaKnown RBP18.27■□□□□ 0.52
PTPRS-206ENST00000588552 EYA1Q99502 592 aa18.27■□□□□ 0.52
PTPRS-206ENST00000588552 C8orf37Q96NL8 207 aa18.27■□□□□ 0.51
PTPRS-206ENST00000588552 MKNK2Q9HBH9 465 aa18.27■□□□□ 0.51
PTPRS-206ENST00000588552 MAGEC2Q9UBF1 373 aaPredicted RBP18.27■□□□□ 0.51
PTPRS-206ENST00000588552 MPHOSPH10O00566 681 aaKnown RBP18.26■□□□□ 0.51
PTPRS-206ENST00000588552 IGHDP01880 384 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 DDB1Q16531 1140 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 FILIP1LQ4L180 1135 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 CCDC83Q8IWF9 413 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 MRPL50Q8N5N7 158 aaKnown RBP18.26■□□□□ 0.51
PTPRS-206ENST00000588552 UHRF1BP1Q6BDS2 1440 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 MEIS3Q99687 375 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 PIK3C2GO75747 1445 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 HOXC9P31274 260 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
PTPRS-206ENST00000588552 CCDC192P0DO97 292 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
PTPRS-206ENST00000588552 GOLIM4O00461 696 aa18.25■□□□□ 0.51
PTPRS-206ENST00000588552 PIP4K2AP48426 406 aaPredicted RBP18.25■□□□□ 0.51
PTPRS-206ENST00000588552 ZNF213O14771 459 aa18.25■□□□□ 0.51
PTPRS-206ENST00000588552 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
PTPRS-206ENST00000588552 NEO1Q92859 1461 aa18.25■□□□□ 0.51
PTPRS-206ENST00000588552 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
PTPRS-206ENST00000588552 MAP3K19Q56UN5 1328 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 C6orf229H3BNL8 230 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 IP6K1Q92551 441 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
PTPRS-206ENST00000588552 TTF1Q15361 905 aaPredicted RBP18.24■□□□□ 0.51
PTPRS-206ENST00000588552 TMEM132AQ24JP5 1023 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 CT47A1Q5JQC4 288 aaPredicted RBP18.24■□□□□ 0.51
PTPRS-206ENST00000588552 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 SNRKQ9NRH2 765 aa18.24■□□□□ 0.51
PTPRS-206ENST00000588552 ZNF219Q9P2Y4 722 aaPredicted RBP18.23■□□□□ 0.51
PTPRS-206ENST00000588552 ALDH1L1O75891 902 aa18.23■□□□□ 0.51
PTPRS-206ENST00000588552 BRPF1P55201 1214 aaPredicted RBP18.23■□□□□ 0.51
PTPRS-206ENST00000588552 NBPF6Q5VWK0 638 aa18.23■□□□□ 0.51
PTPRS-206ENST00000588552 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
PTPRS-206ENST00000588552 RHPN1Q8TCX5 695 aa18.23■□□□□ 0.51
PTPRS-206ENST00000588552 NBPF4Q96M43 638 aa18.23■□□□□ 0.51
PTPRS-206ENST00000588552 BCL11BQ9C0K0 894 aaPredicted RBP18.23■□□□□ 0.51
PTPRS-206ENST00000588552 HDAC1Q13547 482 aaPredicted RBP18.23■□□□□ 0.51
PTPRS-206ENST00000588552 TSHZ3Q63HK5 1081 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 SMARCC1Q92922 1105 aaPredicted RBP18.22■□□□□ 0.51
PTPRS-206ENST00000588552 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 FAM43AQ8N2R8 423 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 PER1O15534 1290 aaPredicted RBP18.22■□□□□ 0.51
PTPRS-206ENST00000588552 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 SH2B1Q9NRF2 756 aaPredicted RBP18.22■□□□□ 0.51
PTPRS-206ENST00000588552 DACH1Q9UI36 760 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 RANBP6O60518 1105 aaKnown RBP18.22■□□□□ 0.51
PTPRS-206ENST00000588552 TTC22Q5TAA0 569 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 ZHX3Q9H4I2 956 aa18.22■□□□□ 0.51
PTPRS-206ENST00000588552 GPS2Q13227 327 aa18.21■□□□□ 0.51
PTPRS-206ENST00000588552 GRM8O00222 908 aa18.21■□□□□ 0.51
PTPRS-206ENST00000588552 STIM1Q13586 685 aa18.21■□□□□ 0.51
PTPRS-206ENST00000588552 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
PTPRS-206ENST00000588552 RNF41Q9H4P4 317 aaPredicted RBP18.21■□□□□ 0.51
PTPRS-206ENST00000588552 CCDC196A0A1B0GTZ2 297 aa18.21■□□□□ 0.51
PTPRS-206ENST00000588552 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
PTPRS-206ENST00000588552 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
PTPRS-206ENST00000588552 IQCA1Q86XH1 822 aa18.2■□□□□ 0.5
PTPRS-206ENST00000588552 ZNF444Q8N0Y2 327 aaPredicted RBP18.2■□□□□ 0.5
PTPRS-206ENST00000588552 MCM4P33991 863 aa18.2■□□□□ 0.5
PTPRS-206ENST00000588552 RSPH6AQ9H0K4 717 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms