RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ZGPATQ8N5A5 531 aaKnown RBP24.12■■□□□ 1.45
MBD1-216ENST00000587605 RHPN1Q8TCX5 695 aa24.12■■□□□ 1.45
MBD1-216ENST00000587605 SURF6O75683 361 aaKnown RBP24.11■■□□□ 1.45
MBD1-216ENST00000587605 ESCO1Q5FWF5 840 aa24.11■■□□□ 1.45
MBD1-216ENST00000587605 USP42Q9H9J4 1324 aaKnown RBP24.1■■□□□ 1.45
MBD1-216ENST00000587605 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
MBD1-216ENST00000587605 EIF2S2P20042 333 aaKnown RBP24.1■■□□□ 1.45
MBD1-216ENST00000587605 LGR6Q9HBX8 967 aa24.1■■□□□ 1.45
MBD1-216ENST00000587605 CHPF2Q9P2E5 772 aa24.1■■□□□ 1.45
MBD1-216ENST00000587605 RGPD2P0DJD1 1756 aa24.1■■□□□ 1.45
MBD1-216ENST00000587605 CLCN1P35523 988 aa24.1■■□□□ 1.45
MBD1-216ENST00000587605 DBF4Q9UBU7 674 aaPredicted RBP24.1■■□□□ 1.45
MBD1-216ENST00000587605 SRGAP3O43295 1099 aa24.09■■□□□ 1.45
MBD1-216ENST00000587605 MTX1Q13505 466 aa24.09■■□□□ 1.45
MBD1-216ENST00000587605 C1orf141Q5JVX7 400 aa24.09■■□□□ 1.45
MBD1-216ENST00000587605 CRYBG1Q9Y4K1 1723 aa24.09■■□□□ 1.45
MBD1-216ENST00000587605 ALDH1L1O75891 902 aa24.08■■□□□ 1.45
MBD1-216ENST00000587605 ANP32BQ92688 251 aaKnown RBP24.08■■□□□ 1.45
MBD1-216ENST00000587605 CCDC173Q0VFZ6 552 aa24.08■■□□□ 1.44
MBD1-216ENST00000587605 CNTROBQ8N137 903 aa24.08■■□□□ 1.44
MBD1-216ENST00000587605 ZDHHC9Q9Y397 364 aa24.08■■□□□ 1.44
MBD1-216ENST00000587605 TTC41PQ6P2S7 1318 aa24.07■■□□□ 1.44
MBD1-216ENST00000587605 PI4KAP2A4QPH2 592 aa24.07■■□□□ 1.44
MBD1-216ENST00000587605 RNMTO43148 476 aaKnown RBP24.07■■□□□ 1.44
MBD1-216ENST00000587605 ARHGEF25Q86VW2 580 aa24.07■■□□□ 1.44
MBD1-216ENST00000587605 PI4KAP1Q8N8J0 262 aa24.07■■□□□ 1.44
MBD1-216ENST00000587605 PI4K2BQ8TCG2 481 aa24.07■■□□□ 1.44
MBD1-216ENST00000587605 TRIM44Q96DX7 344 aaPredicted RBP24.07■■□□□ 1.44
MBD1-216ENST00000587605 ADCY9O60503 1353 aa24.06■■□□□ 1.44
MBD1-216ENST00000587605 HSPA4P34932 840 aa24.06■■□□□ 1.44
MBD1-216ENST00000587605 PKP1Q13835 747 aa24.06■■□□□ 1.44
MBD1-216ENST00000587605 IL1RAPL2Q9NP60 686 aa24.06■■□□□ 1.44
MBD1-216ENST00000587605 HEG1Q9ULI3 1381 aa24.06■■□□□ 1.44
MBD1-216ENST00000587605 NASPP49321 788 aaPredicted RBP24.05■■□□□ 1.44
MBD1-216ENST00000587605 UNC5CLQ8IV45 518 aa24.05■■□□□ 1.44
MBD1-216ENST00000587605 PALD1Q9ULE6 856 aa24.05■■□□□ 1.44
MBD1-216ENST00000587605 ADAMTS7Q9UKP4 1686 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 BRD1O95696 1058 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 MBD3O95983 291 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 GCP02774 474 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 NUTM1Q86Y26 1132 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 PPP1R9BQ96SB3 815 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 SIPA1L3O60292 1781 aaPredicted RBP24.04■■□□□ 1.44
MBD1-216ENST00000587605 SETD1BQ9UPS6 1966 aaKnown RBP24.04■■□□□ 1.44
MBD1-216ENST00000587605 KIF1AQ12756 1690 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 NBPF7P0C2Y1 421 aaPredicted RBP24.04■■□□□ 1.44
MBD1-216ENST00000587605 ERC1Q8IUD2 1116 aa24.04■■□□□ 1.44
MBD1-216ENST00000587605 RAD50Q92878 1312 aa24.03■■□□□ 1.44
MBD1-216ENST00000587605 NPHP4O75161 1426 aaPredicted RBP24.03■■□□□ 1.44
MBD1-216ENST00000587605 SGSM2O43147 1006 aa24.03■■□□□ 1.44
MBD1-216ENST00000587605 GLRX3O76003 335 aaKnown RBP24.03■■□□□ 1.44
MBD1-216ENST00000587605 MST1RQ04912 1400 aa24.02■■□□□ 1.44
MBD1-216ENST00000587605 ZSCAN23Q3MJ62 389 aa24.02■■□□□ 1.44
MBD1-216ENST00000587605 TRPM3Q9HCF6 1732 aaPredicted RBP24.02■■□□□ 1.44
MBD1-216ENST00000587605 CAVIN1Q6NZI2 390 aaKnown RBP24.02■■□□□ 1.44
MBD1-216ENST00000587605 GPATCH3Q96I76 525 aa24.02■■□□□ 1.44
MBD1-216ENST00000587605 HYPKQ9NX55 129 aa24.02■■□□□ 1.44
MBD1-216ENST00000587605 ESPNB1AK53 854 aa24.01■■□□□ 1.43
MBD1-216ENST00000587605 PRPF40AO75400 957 aaKnown RBP24.01■■□□□ 1.43
MBD1-216ENST00000587605 KSR2Q6VAB6 950 aa24.01■■□□□ 1.43
MBD1-216ENST00000587605 MPRIPQ6WCQ1 1025 aa24.01■■□□□ 1.43
MBD1-216ENST00000587605 LRRC59Q96AG4 307 aaKnown RBP24.01■■□□□ 1.43
MBD1-216ENST00000587605 PXDNQ92626 1479 aa24.01■■□□□ 1.43
MBD1-216ENST00000587605 KCNQ3O43525 872 aa24■■□□□ 1.43
MBD1-216ENST00000587605 PLEKHG5O94827 1062 aa24■■□□□ 1.43
MBD1-216ENST00000587605 NCLP19338 710 aaKnown RBP24■■□□□ 1.43
MBD1-216ENST00000587605 ANKRD24Q8TF21 1146 aa24■■□□□ 1.43
MBD1-216ENST00000587605 RUFY2Q8WXA3 655 aa24■■□□□ 1.43
MBD1-216ENST00000587605 ZBTB7CA1YPR0 619 aa24■■□□□ 1.43
MBD1-216ENST00000587605 GIGYF1O75420 1035 aaPredicted RBP24■■□□□ 1.43
MBD1-216ENST00000587605 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
MBD1-216ENST00000587605 KIAA1211Q6ZU35 1233 aa23.99■■□□□ 1.43
MBD1-216ENST00000587605 CLASRPQ8N2M8 674 aaKnown RBP23.99■■□□□ 1.43
MBD1-216ENST00000587605 ADAMTSL3P82987 1691 aa23.98■■□□□ 1.43
MBD1-216ENST00000587605 OS9Q13438 667 aaPredicted RBP23.98■■□□□ 1.43
MBD1-216ENST00000587605 DDX58O95786 925 aaKnown RBP23.98■■□□□ 1.43
MBD1-216ENST00000587605 C9orf78Q9NZ63 289 aaPredicted RBP23.98■■□□□ 1.43
MBD1-216ENST00000587605 WDR33Q9C0J8 1336 aaKnown RBP23.97■■□□□ 1.43
MBD1-216ENST00000587605 LSG1Q9H089 658 aaKnown RBP23.97■■□□□ 1.43
MBD1-216ENST00000587605 MAP3K2Q9Y2U5 619 aa23.97■■□□□ 1.43
MBD1-216ENST00000587605 PLEKHG2Q9H7P9 1386 aa23.96■■□□□ 1.43
MBD1-216ENST00000587605 GPT2Q8TD30 523 aa23.96■■□□□ 1.43
MBD1-216ENST00000587605 UTYO14607 1347 aa23.96■■□□□ 1.43
MBD1-216ENST00000587605 LINS1Q8NG48 757 aa23.96■■□□□ 1.43
MBD1-216ENST00000587605 ABCC6O95255 1503 aa23.96■■□□□ 1.43
MBD1-216ENST00000587605 ECHDC1Q9NTX5 307 aa23.95■■□□□ 1.42
MBD1-216ENST00000587605 HS1BP3Q53T59 392 aa23.94■■□□□ 1.42
MBD1-216ENST00000587605 SYAP1Q96A49 352 aaPredicted RBP23.94■■□□□ 1.42
MBD1-216ENST00000587605 UPF3BQ9BZI7 483 aaKnown RBP23.94■■□□□ 1.42
MBD1-216ENST00000587605 DDX21Q9NR30 783 aaKnown RBP eCLIP23.94■■□□□ 1.42
MBD1-216ENST00000587605 DIAPH3Q9NSV4 1193 aa23.94■■□□□ 1.42
MBD1-216ENST00000587605 SNX14Q9Y5W7 946 aa23.94■■□□□ 1.42
MBD1-216ENST00000587605 IL25Q9H293 177 aa23.93■■□□□ 1.42
MBD1-216ENST00000587605 LRSAM1Q6UWE0 723 aa23.92■■□□□ 1.42
MBD1-216ENST00000587605 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
MBD1-216ENST00000587605 TTC14Q96N46 770 aa23.92■■□□□ 1.42
MBD1-216ENST00000587605 ORAI2Q96SN7 254 aa23.92■■□□□ 1.42
MBD1-216ENST00000587605 HIP1O00291 1037 aa23.92■■□□□ 1.42
MBD1-216ENST00000587605 ANXA1P04083 346 aa23.92■■□□□ 1.42
MBD1-216ENST00000587605 IFIT2P09913 472 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms