RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 ATP10DQ9P241 1426 aa17.64■□□□□ 0.41
MBD1-212ENST00000585672 SRLQ86TD4 932 aa17.64■□□□□ 0.41
MBD1-212ENST00000585672 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
MBD1-212ENST00000585672 ZCCHC17Q9NP64 241 aaKnown RBP17.64■□□□□ 0.41
MBD1-212ENST00000585672 ANO2Q9NQ90 1003 aa17.64■□□□□ 0.41
MBD1-212ENST00000585672 USP32Q8NFA0 1604 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 CKAP2LQ8IYA6 745 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 ATP6V1DQ9Y5K8 247 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 SKILP12757 684 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 CEP85Q6P2H3 762 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 DHX37Q8IY37 1157 aaKnown RBP17.63■□□□□ 0.41
MBD1-212ENST00000585672 IL17RAQ96F46 866 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 UBXN6Q9BZV1 441 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 NUP62CLQ9H1M0 184 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 L2HGDHQ9H9P8 463 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 BRMS1Q9HCU9 246 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 TOMM22Q9NS69 142 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 CHMP3Q9Y3E7 222 aa17.63■□□□□ 0.41
MBD1-212ENST00000585672 PDE1AP54750 535 aa17.62■□□□□ 0.41
MBD1-212ENST00000585672 CCAR2Q8N163 923 aaKnown RBP17.62■□□□□ 0.41
MBD1-212ENST00000585672 RRP15Q9Y3B9 282 aaKnown RBP17.62■□□□□ 0.41
MBD1-212ENST00000585672 ATP10BO94823 1461 aa17.62■□□□□ 0.41
MBD1-212ENST00000585672 ADGRF5Q8IZF2 1346 aa17.62■□□□□ 0.41
MBD1-212ENST00000585672 ABCA8O94911 1581 aa17.62■□□□□ 0.41
MBD1-212ENST00000585672 TSGA10IPQ3SY00 556 aa17.62■□□□□ 0.41
MBD1-212ENST00000585672 ARHGAP29Q52LW3 1261 aa17.62■□□□□ 0.41
MBD1-212ENST00000585672 TRPM2O94759 1503 aa17.62■□□□□ 0.41
MBD1-212ENST00000585672 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
MBD1-212ENST00000585672 LIG1P18858 919 aa17.61■□□□□ 0.41
MBD1-212ENST00000585672 API5Q9BZZ5 524 aaKnown RBP17.61■□□□□ 0.41
MBD1-212ENST00000585672 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
MBD1-212ENST00000585672 CDC25BP30305 580 aa17.61■□□□□ 0.41
MBD1-212ENST00000585672 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
MBD1-212ENST00000585672 CWC15Q9P013 229 aaKnown RBP17.61■□□□□ 0.41
MBD1-212ENST00000585672 JRKLQ9Y4A0 524 aa17.61■□□□□ 0.41
MBD1-212ENST00000585672 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
MBD1-212ENST00000585672 ABCA6Q8N139 1617 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 CCDC93Q567U6 631 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 TSHZ3Q63HK5 1081 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 RPAP2Q8IXW5 612 aaPredicted RBP17.6■□□□□ 0.41
MBD1-212ENST00000585672 FBXO18Q8NFZ0 1043 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 CCZ1BP86790 482 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 CCZ1P86791 482 aaPredicted RBP17.6■□□□□ 0.41
MBD1-212ENST00000585672 GPS2Q13227 327 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 AXDND1Q5T1B0 1012 aaPredicted RBP17.6■□□□□ 0.41
MBD1-212ENST00000585672 TMCO3Q6UWJ1 677 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 LARP6Q9BRS8 491 aaKnown RBP17.6■□□□□ 0.41
MBD1-212ENST00000585672 KIF24Q5T7B8 1368 aa17.6■□□□□ 0.41
MBD1-212ENST00000585672 NEMFO60524 1076 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 DTNBO60941 627 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 REXO1L1PQ8IX06 675 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
MBD1-212ENST00000585672 KCNG1Q9UIX4 513 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 FAM135BQ49AJ0 1406 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 ARHGEF40Q8TER5 1519 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 GOLGA5Q8TBA6 731 aa17.59■□□□□ 0.41
MBD1-212ENST00000585672 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
MBD1-212ENST00000585672 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.41
MBD1-212ENST00000585672 SEC31AO94979 1220 aaKnown RBP17.58■□□□□ 0.41
MBD1-212ENST00000585672 OAS2P29728 719 aaKnown RBP17.58■□□□□ 0.41
MBD1-212ENST00000585672 CT47A1Q5JQC4 288 aaPredicted RBP17.58■□□□□ 0.41
MBD1-212ENST00000585672 EP400NLQ6ZTU2 488 aa17.58■□□□□ 0.41
MBD1-212ENST00000585672 PACS2Q86VP3 889 aa17.58■□□□□ 0.41
MBD1-212ENST00000585672 DRC1Q96MC2 740 aa17.58■□□□□ 0.41
MBD1-212ENST00000585672 TNMDQ9H2S6 317 aa17.58■□□□□ 0.41
MBD1-212ENST00000585672 MTMR6Q9Y217 621 aa17.58■□□□□ 0.41
MBD1-212ENST00000585672 CHMLP26374 656 aa17.58■□□□□ 0.4
MBD1-212ENST00000585672 ZNF165P49910 485 aa17.58■□□□□ 0.4
MBD1-212ENST00000585672 NSD2O96028 1365 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 PLEKHG2Q9H7P9 1386 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 A0A1B0GUL7 405 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 TTC6Q86TZ1 520 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 GPATCH11Q8N954 259 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 DNAJC25Q9H1X3 360 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 SASH3O75995 380 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 KRT24Q2M2I5 525 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 FILIP1Q7Z7B0 1213 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 GOLGA6L1Q8N7Z2 621 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■■■□ 20.3
MBD1-212ENST00000585672 ELP1O95163 1332 aa17.57■□□□□ 0.4
MBD1-212ENST00000585672 INO80Q9ULG1 1556 aaPredicted RBP17.56■□□□□ 0.4
MBD1-212ENST00000585672 KIF2AO00139 706 aaPredicted RBP17.56■□□□□ 0.4
MBD1-212ENST00000585672 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
MBD1-212ENST00000585672 DACT1Q9NYF0 836 aa17.56■□□□□ 0.4
MBD1-212ENST00000585672 ORC3Q9UBD5 711 aaPredicted RBP17.56■□□□□ 0.4
MBD1-212ENST00000585672 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
MBD1-212ENST00000585672 CASTP20810 708 aaKnown RBP17.55■□□□□ 0.4
MBD1-212ENST00000585672 SNW1Q13573 536 aaKnown RBP17.55■□□□□ 0.4
MBD1-212ENST00000585672 TTC31Q49AM3 519 aaPredicted RBP17.55■□□□□ 0.4
MBD1-212ENST00000585672 RUFY3Q7L099 469 aa17.55■□□□□ 0.4
MBD1-212ENST00000585672 ARGLU1Q9NWB6 273 aaPredicted RBP17.55■□□□□ 0.4
MBD1-212ENST00000585672 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
MBD1-212ENST00000585672 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
MBD1-212ENST00000585672 RBM43Q6ZSC3 357 aaKnown RBP17.55■□□□□ 0.4
MBD1-212ENST00000585672 ZNF622Q969S3 477 aaKnown RBP eCLIP17.55■□□□□ 0.45e-7■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms