RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 PKP1Q13835 747 aa14.17□□□□□ -0.14
CDK5RAP3-231ENST00000584063 MEIS3Q99687 375 aa14.17□□□□□ -0.14
CDK5RAP3-231ENST00000584063 FMN2Q9NZ56 1722 aa14.17□□□□□ -0.14
CDK5RAP3-231ENST00000584063 NBPF6Q5VWK0 638 aa14.17□□□□□ -0.14
CDK5RAP3-231ENST00000584063 EGFL6Q8IUX8 553 aa14.17□□□□□ -0.14
CDK5RAP3-231ENST00000584063 NBPF4Q96M43 638 aa14.17□□□□□ -0.14
CDK5RAP3-231ENST00000584063 CADPS2Q86UW7 1296 aa14.16□□□□□ -0.14
CDK5RAP3-231ENST00000584063 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
CDK5RAP3-231ENST00000584063 SLC4A10Q6U841 1118 aa14.16□□□□□ -0.14
CDK5RAP3-231ENST00000584063 TSHZ3Q63HK5 1081 aa14.15□□□□□ -0.14
CDK5RAP3-231ENST00000584063 NOL8Q76FK4 1167 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-231ENST00000584063 KCNH5Q8NCM2 988 aa14.15□□□□□ -0.14
CDK5RAP3-231ENST00000584063 MSH6P52701 1360 aa14.15□□□□□ -0.14
CDK5RAP3-231ENST00000584063 DDX11L8A8MPP1 907 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 MRE11P49959 708 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 BMP2KLQ5H9B9 411 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 TMCO4Q5TGY1 634 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 ARHGAP45Q92619 1136 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 PEAK1Q9H792 1746 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 STRCQ7RTU9 1775 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 RGS12O14924 1447 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 SPTY2D1Q68D10 685 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-231ENST00000584063 CSB-PGBD3P0DP91 1061 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 PLEKHM2Q8IWE5 1019 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 IP6K1Q92551 441 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 K7ELQ4 463 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 CHL1O00533 1208 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 GCC1Q96CN9 775 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 TRIM44Q96DX7 344 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 API5Q9BZZ5 524 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 TSPYL4Q9UJ04 414 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 C1orf167Q5SNV9 1468 aa14.13□□□□□ -0.15
CDK5RAP3-231ENST00000584063 CARD10Q9BWT7 1032 aa14.12□□□□□ -0.15
CDK5RAP3-231ENST00000584063 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-231ENST00000584063 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
CDK5RAP3-231ENST00000584063 NLRP2Q9NX02 1062 aa14.12□□□□□ -0.15
CDK5RAP3-231ENST00000584063 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
CDK5RAP3-231ENST00000584063 DDIT3P35638 169 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 RAB3GAP1Q15042 981 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 RINLQ6ZS11 566 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 ARMCX6Q7L4S7 300 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 ANKRD24Q8TF21 1146 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 GBP4Q96PP9 640 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 ESPNB1AK53 854 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 DTNBO60941 627 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 CEP85Q6P2H3 762 aa14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 ZGPATQ8N5A5 531 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-231ENST00000584063 GNAT3A8MTJ3 354 aa14.1□□□□□ -0.15
CDK5RAP3-231ENST00000584063 CCDC125Q86Z20 511 aa14.1□□□□□ -0.15
CDK5RAP3-231ENST00000584063 ATP10DQ9P241 1426 aa14.1□□□□□ -0.15
CDK5RAP3-231ENST00000584063 ARHGEF25Q86VW2 580 aa14.1□□□□□ -0.15
CDK5RAP3-231ENST00000584063 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
CDK5RAP3-231ENST00000584063 CAVIN1Q6NZI2 390 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-231ENST00000584063 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
CDK5RAP3-231ENST00000584063 DCTPP1Q9H773 170 aa14.09□□□□□ -0.15
CDK5RAP3-231ENST00000584063 RBM27Q9P2N5 1060 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-231ENST00000584063 SNX21Q969T3 373 aa14.09□□□□□ -0.15
CDK5RAP3-231ENST00000584063 CRB1P82279 1406 aa14.08□□□□□ -0.15
CDK5RAP3-231ENST00000584063 INTS3Q68E01 1043 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 NWD1Q149M9 1564 aa14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 NPHP3Q7Z494 1330 aa14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 RTL1A6NKG5 1358 aa14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 CDC45O75419 566 aa14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 POLD1P28340 1107 aa14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 ANKRD44Q8N8A2 993 aa14.08□□□□□ -0.16
CDK5RAP3-231ENST00000584063 CLCN1P35523 988 aa14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 EXOC6BQ9Y2D4 811 aa14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 BAG4O95429 457 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 ZNF530Q6P9A1 599 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 NBPF11Q86T75 865 aa14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 IL17REQ8NFR9 667 aa14.07□□□□□ -0.16
CDK5RAP3-231ENST00000584063 TTC36A6NLP5 189 aa14.06□□□□□ -0.16
CDK5RAP3-231ENST00000584063 TTC22Q5TAA0 569 aa14.06□□□□□ -0.16
CDK5RAP3-231ENST00000584063 ANP32BQ92688 251 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-231ENST00000584063 STK24Q9Y6E0 443 aa14.06□□□□□ -0.16
CDK5RAP3-231ENST00000584063 SDSP20132 328 aa14.06□□□□□ -0.16
CDK5RAP3-231ENST00000584063 MST1RQ04912 1400 aa14.06□□□□□ -0.16
CDK5RAP3-231ENST00000584063 PRPF40AO75400 957 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-231ENST00000584063 EVI5LQ96CN4 794 aa14.05□□□□□ -0.16
CDK5RAP3-231ENST00000584063 EIF2S2P20042 333 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-231ENST00000584063 NASPP49321 788 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-231ENST00000584063 ZHX1Q9UKY1 873 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-231ENST00000584063 NBPF20Q3BBV1 942 aa14.05□□□□□ -0.16
CDK5RAP3-231ENST00000584063 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-231ENST00000584063 NCOA3Q9Y6Q9 1424 aa14.04□□□□□ -0.16
CDK5RAP3-231ENST00000584063 TEFQ10587 303 aa14.04□□□□□ -0.16
CDK5RAP3-231ENST00000584063 C1orf141Q5JVX7 400 aa14.04□□□□□ -0.16
CDK5RAP3-231ENST00000584063 KDRP35968 1356 aa14.03□□□□□ -0.16
CDK5RAP3-231ENST00000584063 PRDM11Q9NQV5 511 aa14.03□□□□□ -0.16
CDK5RAP3-231ENST00000584063 PNMA6EA0A0J9YXQ4 647 aa14.03□□□□□ -0.16
CDK5RAP3-231ENST00000584063 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
CDK5RAP3-231ENST00000584063 STRN4Q9NRL3 753 aa14.03□□□□□ -0.16
CDK5RAP3-231ENST00000584063 NSFL1CQ9UNZ2 370 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms