RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-227ENST00000583352 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
CDK5RAP3-227ENST00000583352 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-227ENST00000583352 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
CDK5RAP3-227ENST00000583352 COL15A1P39059 1388 aa13.07□□□□□ -0.32
CDK5RAP3-227ENST00000583352 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-227ENST00000583352 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-227ENST00000583352 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
CDK5RAP3-227ENST00000583352 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
CDK5RAP3-227ENST00000583352 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
CDK5RAP3-227ENST00000583352 PER1O15534 1290 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-227ENST00000583352 DDX10Q13206 875 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-227ENST00000583352 NFIXQ14938 502 aa13.06□□□□□ -0.32
CDK5RAP3-227ENST00000583352 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
CDK5RAP3-227ENST00000583352 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
CDK5RAP3-227ENST00000583352 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-227ENST00000583352 SERPINB2P05120 415 aa13.04□□□□□ -0.32
CDK5RAP3-227ENST00000583352 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-227ENST00000583352 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
CDK5RAP3-227ENST00000583352 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-227ENST00000583352 NRXN2Q9P2S2 1712 aa13.03□□□□□ -0.32
CDK5RAP3-227ENST00000583352 A0A087WZG4 1122 aa13.03□□□□□ -0.32
CDK5RAP3-227ENST00000583352 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-227ENST00000583352 STARD3NLO95772 234 aa13.03□□□□□ -0.32
CDK5RAP3-227ENST00000583352 TEFQ10587 303 aa13.03□□□□□ -0.32
CDK5RAP3-227ENST00000583352 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
CDK5RAP3-227ENST00000583352 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
CDK5RAP3-227ENST00000583352 SBF1O95248 1867 aa13.02□□□□□ -0.32
CDK5RAP3-227ENST00000583352 FSTL1Q12841 308 aa13.02□□□□□ -0.33
CDK5RAP3-227ENST00000583352 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
CDK5RAP3-227ENST00000583352 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 RASSF7Q02833 373 aa13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 TEX13AQ9BXU3 409 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 RRAGCQ9HB90 399 aa13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 COL3A1P02461 1466 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 TNRC6CQ9HCJ0 1690 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 DLEC1Q9Y238 1755 aa13.01□□□□□ -0.33
CDK5RAP3-227ENST00000583352 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 WDR90Q96KV7 1748 aa13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 H0YIN7 160 aa13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 LMNB1P20700 586 aa13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 ZNF790Q6PG37 636 aa13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 IL17REQ8NFR9 667 aa13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-227ENST00000583352 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-227ENST00000583352 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-227ENST00000583352 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
CDK5RAP3-227ENST00000583352 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-227ENST00000583352 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
CDK5RAP3-227ENST00000583352 SMC1BQ8NDV3 1235 aa12.98□□□□□ -0.33
CDK5RAP3-227ENST00000583352 CFAP53Q96M91 514 aa12.98□□□□□ -0.33
CDK5RAP3-227ENST00000583352 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
CDK5RAP3-227ENST00000583352 PDZRN3Q9UPQ7 1066 aa12.98□□□□□ -0.33
CDK5RAP3-227ENST00000583352 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-227ENST00000583352 SCN7AQ01118 1682 aa12.97□□□□□ -0.33
CDK5RAP3-227ENST00000583352 GLTPD2A6NH11 291 aa12.97□□□□□ -0.33
CDK5RAP3-227ENST00000583352 PDE6BP35913 854 aa12.97□□□□□ -0.33
CDK5RAP3-227ENST00000583352 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.336e-13■■□□□ 12.3
CDK5RAP3-227ENST00000583352 TBC1D2BQ9UPU7 963 aa12.97□□□□□ -0.33
CDK5RAP3-227ENST00000583352 PRKAR2BP31323 418 aa12.96□□□□□ -0.33
CDK5RAP3-227ENST00000583352 KLRG1Q96E93 195 aa12.96□□□□□ -0.33
CDK5RAP3-227ENST00000583352 BRIP1Q9BX63 1249 aa12.96□□□□□ -0.33
CDK5RAP3-227ENST00000583352 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 BTBD11A6QL63 1104 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 NFKBIEO00221 500 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 NPHP1O15259 732 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 A1BGP04217 495 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 VEGFAP15692 232 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 PRELPP51888 382 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 HTRA3P83110 453 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 PRR5LQ6MZQ0 368 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 NUDCQ9Y266 331 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 TIAM2Q8IVF5 1701 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 ANKRD31Q8N7Z5 1873 aa12.95□□□□□ -0.34
CDK5RAP3-227ENST00000583352 CCDC88AQ3V6T2 1871 aa12.94□□□□□ -0.34
CDK5RAP3-227ENST00000583352 CAMTA2O94983 1202 aa12.94□□□□□ -0.34
CDK5RAP3-227ENST00000583352 CNBD1Q8NA66 436 aa12.94□□□□□ -0.34
CDK5RAP3-227ENST00000583352 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
CDK5RAP3-227ENST00000583352 SETDB2Q96T68 719 aa12.94□□□□□ -0.34
CDK5RAP3-227ENST00000583352 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
CDK5RAP3-227ENST00000583352 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-227ENST00000583352 KCNQ3O43525 872 aa12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 C21orf2O43822 256 aa12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 ST5P78524 1137 aa12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 DZIP3Q86Y13 1208 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
CDK5RAP3-227ENST00000583352 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-227ENST00000583352 RTF1Q92541 710 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-227ENST00000583352 BCORQ6W2J9 1755 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms