RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
TVP23C-209ENST00000583206 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
TVP23C-209ENST00000583206 MTHFSP49914 203 aa13.03□□□□□ -0.32
TVP23C-209ENST00000583206 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
TVP23C-209ENST00000583206 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
TVP23C-209ENST00000583206 DNAJC10Q8IXB1 793 aa13.03□□□□□ -0.32
TVP23C-209ENST00000583206 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
TVP23C-209ENST00000583206 CNTNAP1P78357 1384 aa13.03□□□□□ -0.32
TVP23C-209ENST00000583206 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.32
TVP23C-209ENST00000583206 ZPR1O75312 459 aa13.02□□□□□ -0.33
TVP23C-209ENST00000583206 SERPINB2P05120 415 aa13.02□□□□□ -0.33
TVP23C-209ENST00000583206 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
TVP23C-209ENST00000583206 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
TVP23C-209ENST00000583206 PASKQ96RG2 1323 aa13.02□□□□□ -0.33
TVP23C-209ENST00000583206 TJP1Q07157 1748 aa13.02□□□□□ -0.33
TVP23C-209ENST00000583206 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
TVP23C-209ENST00000583206 CDCA8Q53HL2 280 aa13.01□□□□□ -0.33
TVP23C-209ENST00000583206 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
TVP23C-209ENST00000583206 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
TVP23C-209ENST00000583206 WBP1LQ9NX94 342 aa13.01□□□□□ -0.33
TVP23C-209ENST00000583206 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
TVP23C-209ENST00000583206 AFDNP55196 1824 aaKnown RBP13□□□□□ -0.33
TVP23C-209ENST00000583206 ITGBL1O95965 494 aaPredicted RBP13□□□□□ -0.33
TVP23C-209ENST00000583206 CTCFP49711 727 aaPredicted RBP13□□□□□ -0.33
TVP23C-209ENST00000583206 VEGFBP49765 207 aa13□□□□□ -0.33
TVP23C-209ENST00000583206 H0YIN7 160 aa12.99□□□□□ -0.33
TVP23C-209ENST00000583206 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
TVP23C-209ENST00000583206 ERFEQ4G0M1 354 aa12.99□□□□□ -0.33
TVP23C-209ENST00000583206 CCDC88AQ3V6T2 1871 aa12.99□□□□□ -0.33
TVP23C-209ENST00000583206 LBX1P52954 281 aa12.98□□□□□ -0.33
TVP23C-209ENST00000583206 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
TVP23C-209ENST00000583206 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
TVP23C-209ENST00000583206 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
TVP23C-209ENST00000583206 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
TVP23C-209ENST00000583206 C21orf2O43822 256 aa12.97□□□□□ -0.33
TVP23C-209ENST00000583206 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
TVP23C-209ENST00000583206 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
TVP23C-209ENST00000583206 ABHD8Q96I13 439 aa12.97□□□□□ -0.33
TVP23C-209ENST00000583206 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
TVP23C-209ENST00000583206 COL15A1P39059 1388 aa12.96□□□□□ -0.33
TVP23C-209ENST00000583206 HSPA8P11142 646 aaKnown RBP12.96□□□□□ -0.33
TVP23C-209ENST00000583206 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
TVP23C-209ENST00000583206 RGS19P49795 217 aa12.95□□□□□ -0.34
TVP23C-209ENST00000583206 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
TVP23C-209ENST00000583206 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
TVP23C-209ENST00000583206 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
TVP23C-209ENST00000583206 BRIP1Q9BX63 1249 aa12.95□□□□□ -0.34
TVP23C-209ENST00000583206 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
TVP23C-209ENST00000583206 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
TVP23C-209ENST00000583206 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
TVP23C-209ENST00000583206 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
TVP23C-209ENST00000583206 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
TVP23C-209ENST00000583206 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
TVP23C-209ENST00000583206 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
TVP23C-209ENST00000583206 ZNF622Q969S3 477 aaKnown RBP eCLIP12.94□□□□□ -0.34
TVP23C-209ENST00000583206 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
TVP23C-209ENST00000583206 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 C7orf43Q8WVR3 580 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 AIDAQ96BJ3 306 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
TVP23C-209ENST00000583206 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
TVP23C-209ENST00000583206 PDE6BP35913 854 aa12.92□□□□□ -0.34
TVP23C-209ENST00000583206 AKAP4Q5JQC9 854 aa12.92□□□□□ -0.34
TVP23C-209ENST00000583206 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
TVP23C-209ENST00000583206 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
TVP23C-209ENST00000583206 ANKRD31Q8N7Z5 1873 aa12.92□□□□□ -0.34
TVP23C-209ENST00000583206 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
TVP23C-209ENST00000583206 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
TVP23C-209ENST00000583206 IL13P35225 146 aa12.91□□□□□ -0.34
TVP23C-209ENST00000583206 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
TVP23C-209ENST00000583206 SRGNP10124 158 aa12.9□□□□□ -0.34
TVP23C-209ENST00000583206 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
TVP23C-209ENST00000583206 DEFB115Q30KQ5 88 aa12.9□□□□□ -0.34
TVP23C-209ENST00000583206 MRC1P22897 1456 aa12.9□□□□□ -0.34
TVP23C-209ENST00000583206 WDR33Q9C0J8 1336 aaKnown RBP12.89□□□□□ -0.35
TVP23C-209ENST00000583206 TNRC18O15417 2968 aaPredicted RBP12.89□□□□□ -0.35
TVP23C-209ENST00000583206 MLLT1Q03111 559 aaPredicted RBP12.89□□□□□ -0.35
TVP23C-209ENST00000583206 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
TVP23C-209ENST00000583206 PRPF40BQ6NWY9 871 aaKnown RBP12.89□□□□□ -0.35
TVP23C-209ENST00000583206 CNKSR1Q969H4 720 aa12.89□□□□□ -0.35
TVP23C-209ENST00000583206 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
TVP23C-209ENST00000583206 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
TVP23C-209ENST00000583206 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
TVP23C-209ENST00000583206 CNTROBQ8N137 903 aa12.88□□□□□ -0.35
TVP23C-209ENST00000583206 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
TVP23C-209ENST00000583206 SCN4AP35499 1836 aa12.88□□□□□ -0.35
TVP23C-209ENST00000583206 A0A087WZG4 1122 aa12.87□□□□□ -0.35
TVP23C-209ENST00000583206 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
TVP23C-209ENST00000583206 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
TVP23C-209ENST00000583206 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
TVP23C-209ENST00000583206 KLRG2A4D1S0 409 aaPredicted RBP12.86□□□□□ -0.35
TVP23C-209ENST00000583206 CAMTA2O94983 1202 aa12.86□□□□□ -0.35
TVP23C-209ENST00000583206 EPHX2P34913 555 aa12.86□□□□□ -0.35
TVP23C-209ENST00000583206 EAPPQ56P03 285 aaPredicted RBP12.86□□□□□ -0.35
TVP23C-209ENST00000583206 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms