RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
CSNK1D-219ENST00000581660 PTCD1O75127 700 aaKnown RBP19.28■□□□□ 0.68
CSNK1D-219ENST00000581660 CABP4P57796 275 aa19.28■□□□□ 0.68
CSNK1D-219ENST00000581660 DICER1Q9UPY3 1922 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-219ENST00000581660 EIF4A2Q14240 407 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-219ENST00000581660 POLKQ9UBT6 870 aa19.27■□□□□ 0.68
CSNK1D-219ENST00000581660 ZPR1O75312 459 aa19.26■□□□□ 0.67
CSNK1D-219ENST00000581660 USPL1Q5W0Q7 1092 aa19.26■□□□□ 0.67
CSNK1D-219ENST00000581660 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-219ENST00000581660 PASKQ96RG2 1323 aa19.25■□□□□ 0.67
CSNK1D-219ENST00000581660 NFIXQ14938 502 aa19.25■□□□□ 0.67
CSNK1D-219ENST00000581660 AIDAQ96BJ3 306 aa19.25■□□□□ 0.67
CSNK1D-219ENST00000581660 FAM161AQ3B820 660 aa19.24■□□□□ 0.67
CSNK1D-219ENST00000581660 PLEKHO1Q53GL0 409 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-219ENST00000581660 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
CSNK1D-219ENST00000581660 WBP1LQ9NX94 342 aa19.24■□□□□ 0.67
CSNK1D-219ENST00000581660 AMOTQ4VCS5 1084 aa19.23■□□□□ 0.67
CSNK1D-219ENST00000581660 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-219ENST00000581660 C2CD5Q86YS7 1000 aa19.23■□□□□ 0.67
CSNK1D-219ENST00000581660 ABHD8Q96I13 439 aa19.23■□□□□ 0.67
CSNK1D-219ENST00000581660 NARFQ9UHQ1 456 aa19.23■□□□□ 0.67
CSNK1D-219ENST00000581660 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-219ENST00000581660 FER1L6Q2WGJ9 1857 aa19.22■□□□□ 0.67
CSNK1D-219ENST00000581660 POTEIP0CG38 1075 aa19.22■□□□□ 0.67
CSNK1D-219ENST00000581660 POTEJP0CG39 1038 aa19.22■□□□□ 0.67
CSNK1D-219ENST00000581660 LTBP3Q9NS15 1303 aa19.22■□□□□ 0.67
CSNK1D-219ENST00000581660 CARMIL3Q8ND23 1372 aa19.21■□□□□ 0.67
CSNK1D-219ENST00000581660 H0YIN7 160 aa19.21■□□□□ 0.67
CSNK1D-219ENST00000581660 SERPINB2P05120 415 aa19.21■□□□□ 0.67
CSNK1D-219ENST00000581660 VEGFBP49765 207 aa19.21■□□□□ 0.67
CSNK1D-219ENST00000581660 MTHFSP49914 203 aa19.21■□□□□ 0.67
CSNK1D-219ENST00000581660 ERFEQ4G0M1 354 aa19.21■□□□□ 0.67
CSNK1D-219ENST00000581660 NFATC2IPQ8NCF5 419 aa19.21■□□□□ 0.67
CSNK1D-219ENST00000581660 LBX1P52954 281 aa19.2■□□□□ 0.66
CSNK1D-219ENST00000581660 BCL2L12Q9HB09 334 aa19.2■□□□□ 0.66
CSNK1D-219ENST00000581660 COL15A1P39059 1388 aa19.19■□□□□ 0.66
CSNK1D-219ENST00000581660 LDHDQ86WU2 507 aa19.19■□□□□ 0.66
CSNK1D-219ENST00000581660 TMEM88BA6NKF7 163 aa19.18■□□□□ 0.66
CSNK1D-219ENST00000581660 DNAJC10Q8IXB1 793 aa19.18■□□□□ 0.66
CSNK1D-219ENST00000581660 PDZRN3Q9UPQ7 1066 aa19.18■□□□□ 0.66
CSNK1D-219ENST00000581660 SCN4AP35499 1836 aa19.17■□□□□ 0.66
CSNK1D-219ENST00000581660 HSPA8P11142 646 aaKnown RBP19.17■□□□□ 0.66
CSNK1D-219ENST00000581660 CYP19A1P11511 503 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-219ENST00000581660 C1orf141Q5JVX7 400 aa19.17■□□□□ 0.66
CSNK1D-219ENST00000581660 L3MBTL3Q96JM7 780 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-219ENST00000581660 ANKRD31Q8N7Z5 1873 aa19.17■□□□□ 0.66
CSNK1D-219ENST00000581660 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
CSNK1D-219ENST00000581660 IQCA1LA6NCM1 817 aa19.16■□□□□ 0.66
CSNK1D-219ENST00000581660 DDNO94850 711 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-219ENST00000581660 ITGBL1O95965 494 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-219ENST00000581660 RGS19P49795 217 aa19.16■□□□□ 0.66
CSNK1D-219ENST00000581660 COL11A2P13942 1736 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-219ENST00000581660 C21orf2O43822 256 aa19.15■□□□□ 0.66
CSNK1D-219ENST00000581660 TAOK3Q9H2K8 898 aa19.15■□□□□ 0.66
CSNK1D-219ENST00000581660 RASSF10A6NK89 507 aa19.14■□□□□ 0.65
CSNK1D-219ENST00000581660 MLLT1Q03111 559 aaPredicted RBP19.14■□□□□ 0.65
CSNK1D-219ENST00000581660 TAF1DQ9H5J8 278 aaPredicted RBP19.14■□□□□ 0.65
CSNK1D-219ENST00000581660 MRC1P22897 1456 aa19.14■□□□□ 0.65
CSNK1D-219ENST00000581660 BRIP1Q9BX63 1249 aa19.13■□□□□ 0.65
CSNK1D-219ENST00000581660 ZBTB1Q9Y2K1 713 aa19.13■□□□□ 0.65
CSNK1D-219ENST00000581660 ADAMTSL1Q8N6G6 1762 aa19.13■□□□□ 0.65
CSNK1D-219ENST00000581660 ZNF622Q969S3 477 aaKnown RBP eCLIP19.12■□□□□ 0.659e-8■□□□□ 10
CSNK1D-219ENST00000581660 PDE6BP35913 854 aa19.11■□□□□ 0.65
CSNK1D-219ENST00000581660 MAP2K1Q02750 393 aaPredicted RBP19.11■□□□□ 0.65
CSNK1D-219ENST00000581660 AEBP1Q8IUX7 1158 aa19.11■□□□□ 0.65
CSNK1D-219ENST00000581660 THSD7BQ9C0I4 1608 aa19.11■□□□□ 0.65
CSNK1D-219ENST00000581660 SLC52A2Q9HAB3 445 aa19.1■□□□□ 0.65
CSNK1D-219ENST00000581660 ARFGEF2Q9Y6D5 1785 aa19.09■□□□□ 0.65
CSNK1D-219ENST00000581660 SOGA3Q5TF21 947 aa19.09■□□□□ 0.65
CSNK1D-219ENST00000581660 VSIG10Q8N0Z9 540 aa19.09■□□□□ 0.65
CSNK1D-219ENST00000581660 ZNF219Q9P2Y4 722 aaPredicted RBP19.09■□□□□ 0.65
CSNK1D-219ENST00000581660 TNNT2P45379 298 aaPredicted RBP19.08■□□□□ 0.64
CSNK1D-219ENST00000581660 DEFB115Q30KQ5 88 aa19.08■□□□□ 0.64
CSNK1D-219ENST00000581660 PRR5LQ6MZQ0 368 aa19.08■□□□□ 0.64
CSNK1D-219ENST00000581660 SLX4Q8IY92 1834 aa19.08■□□□□ 0.64
CSNK1D-219ENST00000581660 SCN7AQ01118 1682 aa19.08■□□□□ 0.64
CSNK1D-219ENST00000581660 WDR33Q9C0J8 1336 aaKnown RBP19.07■□□□□ 0.64
CSNK1D-219ENST00000581660 EIF5P55010 431 aaKnown RBP19.07■□□□□ 0.64
CSNK1D-219ENST00000581660 STYK1Q6J9G0 422 aa19.07■□□□□ 0.64
CSNK1D-219ENST00000581660 CNKSR1Q969H4 720 aa19.07■□□□□ 0.64
CSNK1D-219ENST00000581660 PDE4DIPQ5VU43 2346 aa19.06■□□□□ 0.64
CSNK1D-219ENST00000581660 CCDC85CA6NKD9 419 aa19.06■□□□□ 0.64
CSNK1D-219ENST00000581660 AKAP4Q5JQC9 854 aa19.06■□□□□ 0.64
CSNK1D-219ENST00000581660 BICDL1Q6ZP65 573 aa19.06■□□□□ 0.64
CSNK1D-219ENST00000581660 A0A087WZG4 1122 aa19.05■□□□□ 0.64
CSNK1D-219ENST00000581660 TBC1D9BQ66K14 1250 aa19.05■□□□□ 0.64
CSNK1D-219ENST00000581660 PRPF40BQ6NWY9 871 aaKnown RBP19.05■□□□□ 0.64
CSNK1D-219ENST00000581660 UBR2Q8IWV8 1755 aa19.05■□□□□ 0.64
CSNK1D-219ENST00000581660 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
CSNK1D-219ENST00000581660 EAPPQ56P03 285 aaPredicted RBP19.04■□□□□ 0.64
CSNK1D-219ENST00000581660 SULT6B1Q6IMI4 303 aa19.04■□□□□ 0.64
CSNK1D-219ENST00000581660 HACL1Q9UJ83 578 aa19.04■□□□□ 0.64
CSNK1D-219ENST00000581660 ZNF541Q9H0D2 1346 aa19.03■□□□□ 0.64
CSNK1D-219ENST00000581660 SRGNP10124 158 aa19.03■□□□□ 0.64
CSNK1D-219ENST00000581660 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
CSNK1D-219ENST00000581660 EPHX2P34913 555 aa19.03■□□□□ 0.64
CSNK1D-219ENST00000581660 PNMA8AQ86V59 439 aaPredicted RBP19.03■□□□□ 0.64
CSNK1D-219ENST00000581660 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
CSNK1D-219ENST00000581660 LGR6Q9HBX8 967 aa19.03■□□□□ 0.64
CSNK1D-219ENST00000581660 CNTROBQ8N137 903 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms