RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-219ENST00000580670 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
CDK5RAP3-219ENST00000580670 KRT27Q7Z3Y8 459 aa17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PTPRCP08575 1304 aa17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 COG6Q9Y2V7 657 aa17.63■□□□□ 0.41
CDK5RAP3-219ENST00000580670 LAMB4A4D0S4 1761 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 FLIIQ13045 1269 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 VSIG10Q8N0Z9 540 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ANP32EQ9BTT0 268 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ANXA1P04083 346 aa17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PHAXQ9H814 394 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 DDX21Q9NR30 783 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDK5RAP3-219ENST00000580670 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PROSER3Q2NL68 480 aa17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-219ENST00000580670 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PDIA6Q15084 440 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 HYPKQ9NX55 129 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ABCC4O15439 1325 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 RGS12O14924 1447 aa17.59■□□□□ 0.41
CDK5RAP3-219ENST00000580670 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PALLDQ8WX93 1383 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.41
CDK5RAP3-219ENST00000580670 SBF2Q86WG5 1849 aa17.58■□□□□ 0.4
CDK5RAP3-219ENST00000580670 MYL6BP14649 208 aa17.58■□□□□ 0.4
CDK5RAP3-219ENST00000580670 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
CDK5RAP3-219ENST00000580670 BTAF1O14981 1849 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 PIP4K2AP48426 406 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 SIK1P57059 783 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 F6X3S4 739 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 STARD3NLO95772 234 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 A1BGP04217 495 aa17.56■□□□□ 0.4
CDK5RAP3-219ENST00000580670 ATP6V1AP38606 617 aa17.55■□□□□ 0.4
CDK5RAP3-219ENST00000580670 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 TJP1Q07157 1748 aa17.54■□□□□ 0.4
CDK5RAP3-219ENST00000580670 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 LRP10Q7Z4F1 713 aa17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 XAGE3Q8WTP9 111 aa17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-219ENST00000580670 PI4KAP2A4QPH2 592 aa17.52■□□□□ 0.4
CDK5RAP3-219ENST00000580670 COPS6Q7L5N1 327 aa17.52■□□□□ 0.4
CDK5RAP3-219ENST00000580670 PI4KAP1Q8N8J0 262 aa17.52■□□□□ 0.4
CDK5RAP3-219ENST00000580670 CCT4P50991 539 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ITPK1Q13572 414 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 AAMPQ13685 434 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ADCY9O60503 1353 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 TRIM37O94972 964 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 MAP3K2Q9Y2U5 619 aa17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZNF831Q5JPB2 1677 aa17.49■□□□□ 0.39
CDK5RAP3-219ENST00000580670 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CRKLP46109 303 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 KCNQ4P56696 695 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ANKRD13DQ6ZTN6 518 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
CDK5RAP3-219ENST00000580670 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-219ENST00000580670 LY75O60449 1722 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 BEND3Q5T5X7 828 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 TTLL7Q6ZT98 887 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 LINC00116Q8NCU8 138 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-219ENST00000580670 PLBD2Q8NHP8 589 aa17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 COL5A3P25940 1745 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 ATP10DQ9P241 1426 aa17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-219ENST00000580670 EP400Q96L91 3159 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 589.2 ms