RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
SKA2-204ENST00000578519 ERBB4Q15303 1308 aa13.8□□□□□ -0.2
SKA2-204ENST00000578519 RGPD5Q99666 1765 aa13.8□□□□□ -0.2
SKA2-204ENST00000578519 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
SKA2-204ENST00000578519 MEGF6O75095 1541 aa13.8□□□□□ -0.2
SKA2-204ENST00000578519 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
SKA2-204ENST00000578519 CYP27B1O15528 508 aa13.79□□□□□ -0.2
SKA2-204ENST00000578519 RAB11FIP3O75154 756 aa13.79□□□□□ -0.2
SKA2-204ENST00000578519 CDCA7Q9BWT1 371 aaPredicted RBP13.79□□□□□ -0.2
SKA2-204ENST00000578519 PHAXQ9H814 394 aaKnown RBP13.79□□□□□ -0.2
SKA2-204ENST00000578519 ATP10DQ9P241 1426 aa13.79□□□□□ -0.2
SKA2-204ENST00000578519 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
SKA2-204ENST00000578519 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
SKA2-204ENST00000578519 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
SKA2-204ENST00000578519 IBTKQ9P2D0 1353 aaPredicted RBP13.78□□□□□ -0.2
SKA2-204ENST00000578519 KDM6AO15550 1401 aaPredicted RBP13.77□□□□□ -0.21
SKA2-204ENST00000578519 BEND3Q5T5X7 828 aa13.77□□□□□ -0.21
SKA2-204ENST00000578519 RIC3Q7Z5B4 369 aa13.77□□□□□ -0.21
SKA2-204ENST00000578519 LINS1Q8NG48 757 aa13.77□□□□□ -0.21
SKA2-204ENST00000578519 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
SKA2-204ENST00000578519 USP44Q9H0E7 712 aa13.77□□□□□ -0.21
SKA2-204ENST00000578519 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
SKA2-204ENST00000578519 MRC1P22897 1456 aa13.76□□□□□ -0.21
SKA2-204ENST00000578519 MYT1Q01538 1121 aa13.76□□□□□ -0.21
SKA2-204ENST00000578519 ANP32EQ9BTT0 268 aa13.76□□□□□ -0.21
SKA2-204ENST00000578519 LRRCC1Q9C099 1032 aa13.76□□□□□ -0.21
SKA2-204ENST00000578519 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
SKA2-204ENST00000578519 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
SKA2-204ENST00000578519 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
SKA2-204ENST00000578519 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
SKA2-204ENST00000578519 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
SKA2-204ENST00000578519 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
SKA2-204ENST00000578519 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
SKA2-204ENST00000578519 CDC45O75419 566 aa13.74□□□□□ -0.21
SKA2-204ENST00000578519 SLC39A6Q13433 755 aa13.74□□□□□ -0.21
SKA2-204ENST00000578519 PLEKHM2Q8IWE5 1019 aa13.74□□□□□ -0.21
SKA2-204ENST00000578519 SSH3Q8TE77 659 aa13.74□□□□□ -0.21
SKA2-204ENST00000578519 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
SKA2-204ENST00000578519 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
SKA2-204ENST00000578519 THRAP3Q9Y2W1 955 aaKnown RBP13.74□□□□□ -0.21
SKA2-204ENST00000578519 EXOC5O00471 708 aa13.73□□□□□ -0.21
SKA2-204ENST00000578519 ERC1Q8IUD2 1116 aa13.73□□□□□ -0.21
SKA2-204ENST00000578519 TMOD3Q9NYL9 352 aa13.73□□□□□ -0.21
SKA2-204ENST00000578519 TTC22Q5TAA0 569 aa13.72□□□□□ -0.21
SKA2-204ENST00000578519 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
SKA2-204ENST00000578519 TBC1D32Q96NH3 1257 aa13.72□□□□□ -0.21
SKA2-204ENST00000578519 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
SKA2-204ENST00000578519 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
SKA2-204ENST00000578519 SIPA1L3O60292 1781 aaPredicted RBP13.72□□□□□ -0.21
SKA2-204ENST00000578519 COL14A1Q05707 1796 aaKnown RBP13.71□□□□□ -0.21
SKA2-204ENST00000578519 AOX1Q06278 1338 aa13.71□□□□□ -0.21
SKA2-204ENST00000578519 AIMP1Q12904 312 aaKnown RBP13.71□□□□□ -0.21
SKA2-204ENST00000578519 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
SKA2-204ENST00000578519 KIF1BPQ96EK5 621 aa13.71□□□□□ -0.21
SKA2-204ENST00000578519 METTL22Q9BUU2 404 aaPredicted RBP13.71□□□□□ -0.21
SKA2-204ENST00000578519 ADCY9O60503 1353 aa13.71□□□□□ -0.22
SKA2-204ENST00000578519 GRM8O00222 908 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 SURF6O75683 361 aaKnown RBP13.7□□□□□ -0.22
SKA2-204ENST00000578519 MYL6BP14649 208 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
SKA2-204ENST00000578519 MTX1Q13505 466 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 POLA2Q14181 598 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 PDIA6Q15084 440 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 PPP1R42Q7Z4L9 355 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
SKA2-204ENST00000578519 VIRMAQ69YN4 1812 aaKnown RBP13.69□□□□□ -0.22
SKA2-204ENST00000578519 UTYO14607 1347 aa13.69□□□□□ -0.22
SKA2-204ENST00000578519 LTBP4Q8N2S1 1624 aa13.69□□□□□ -0.22
SKA2-204ENST00000578519 N4BP2Q86UW6 1770 aaPredicted RBP13.69□□□□□ -0.22
SKA2-204ENST00000578519 ANXA1P04083 346 aa13.69□□□□□ -0.22
SKA2-204ENST00000578519 OS9Q13438 667 aaPredicted RBP13.69□□□□□ -0.22
SKA2-204ENST00000578519 USP16Q9Y5T5 823 aa13.69□□□□□ -0.22
SKA2-204ENST00000578519 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
SKA2-204ENST00000578519 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
SKA2-204ENST00000578519 APBB1O00213 710 aa13.68□□□□□ -0.22
SKA2-204ENST00000578519 STARD3NLO95772 234 aa13.68□□□□□ -0.22
SKA2-204ENST00000578519 GPATCH3Q96I76 525 aa13.68□□□□□ -0.22
SKA2-204ENST00000578519 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
SKA2-204ENST00000578519 EXOC6BQ9Y2D4 811 aa13.68□□□□□ -0.22
SKA2-204ENST00000578519 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
SKA2-204ENST00000578519 SEC24BO95487 1268 aa13.67□□□□□ -0.22
SKA2-204ENST00000578519 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
SKA2-204ENST00000578519 PDE1AP54750 535 aa13.67□□□□□ -0.22
SKA2-204ENST00000578519 G3BP1Q13283 466 aaKnown RBP eCLIP13.67□□□□□ -0.22
SKA2-204ENST00000578519 PROSER3Q2NL68 480 aa13.67□□□□□ -0.22
SKA2-204ENST00000578519 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
SKA2-204ENST00000578519 STAP2Q9UGK3 403 aa13.67□□□□□ -0.22
SKA2-204ENST00000578519 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
SKA2-204ENST00000578519 REC8O95072 547 aa13.66□□□□□ -0.22
SKA2-204ENST00000578519 MX1P20591 662 aa13.66□□□□□ -0.22
SKA2-204ENST00000578519 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
SKA2-204ENST00000578519 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
SKA2-204ENST00000578519 RHPN1Q8TCX5 695 aa13.66□□□□□ -0.22
SKA2-204ENST00000578519 MYD88Q99836 296 aa13.66□□□□□ -0.22
SKA2-204ENST00000578519 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
SKA2-204ENST00000578519 ERC2O15083 957 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms