RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
SMARCE1-214ENST00000578112 SIPA1L3O60292 1781 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-214ENST00000578112 FKBP8Q14318 412 aa15.22■□□□□ 0.03
SMARCE1-214ENST00000578112 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.03
SMARCE1-214ENST00000578112 DIAPH1O60610 1272 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-214ENST00000578112 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
SMARCE1-214ENST00000578112 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.02
SMARCE1-214ENST00000578112 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
SMARCE1-214ENST00000578112 RGL2O15211 777 aa15.2■□□□□ 0.02
SMARCE1-214ENST00000578112 SRP68Q9UHB9 627 aaKnown RBP15.2■□□□□ 0.02
SMARCE1-214ENST00000578112 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
SMARCE1-214ENST00000578112 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
SMARCE1-214ENST00000578112 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
SMARCE1-214ENST00000578112 STARD3NLO95772 234 aa15.19■□□□□ 0.02
SMARCE1-214ENST00000578112 PER1O15534 1290 aaPredicted RBP15.18■□□□□ 0.02
SMARCE1-214ENST00000578112 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
SMARCE1-214ENST00000578112 ARFGEF2Q9Y6D5 1785 aa15.18■□□□□ 0.02
SMARCE1-214ENST00000578112 NFIXQ14938 502 aa15.17■□□□□ 0.02
SMARCE1-214ENST00000578112 TTC5Q8N0Z6 440 aa15.17■□□□□ 0.02
SMARCE1-214ENST00000578112 DNAJC5GQ8N7S2 189 aa15.17■□□□□ 0.02
SMARCE1-214ENST00000578112 RNF181Q9P0P0 153 aa15.17■□□□□ 0.02
SMARCE1-214ENST00000578112 TIAM2Q8IVF5 1701 aa15.17■□□□□ 0.02
SMARCE1-214ENST00000578112 MTHFSDQ2M296 383 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 SMC1BQ8NDV3 1235 aa15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 BCORQ6W2J9 1755 aa15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 LMNB1P20700 586 aa15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 NMRK2Q9NPI5 230 aa15.16■□□□□ 0.02
SMARCE1-214ENST00000578112 HEG1Q9ULI3 1381 aa15.15■□□□□ 0.02
SMARCE1-214ENST00000578112 SERPINB2P05120 415 aa15.15■□□□□ 0.02
SMARCE1-214ENST00000578112 TTLL6Q8N841 843 aa15.15■□□□□ 0.02
SMARCE1-214ENST00000578112 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
SMARCE1-214ENST00000578112 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
SMARCE1-214ENST00000578112 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
SMARCE1-214ENST00000578112 ZBTB1Q9Y2K1 713 aa15.14■□□□□ 0.01
SMARCE1-214ENST00000578112 DICER1Q9UPY3 1922 aaKnown RBP15.14■□□□□ 0.01
SMARCE1-214ENST00000578112 PDE6BP35913 854 aa15.14■□□□□ 0.01
SMARCE1-214ENST00000578112 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
SMARCE1-214ENST00000578112 BCL2L12Q9HB09 334 aa15.14■□□□□ 0.01
SMARCE1-214ENST00000578112 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
SMARCE1-214ENST00000578112 GNAT3A8MTJ3 354 aa15.13■□□□□ 0.01
SMARCE1-214ENST00000578112 H0YIN7 160 aa15.13■□□□□ 0.01
SMARCE1-214ENST00000578112 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
SMARCE1-214ENST00000578112 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
SMARCE1-214ENST00000578112 CHRNA5P30532 468 aa15.13■□□□□ 0.01
SMARCE1-214ENST00000578112 SOGA3Q5TF21 947 aa15.13■□□□□ 0.01
SMARCE1-214ENST00000578112 BRIP1Q9BX63 1249 aa15.12■□□□□ 0.01
SMARCE1-214ENST00000578112 ANKRD31Q8N7Z5 1873 aa15.12■□□□□ 0.01
SMARCE1-214ENST00000578112 GLTPD2A6NH11 291 aa15.12■□□□□ 0.01
SMARCE1-214ENST00000578112 HMOX1P09601 288 aa15.12■□□□□ 0.01
SMARCE1-214ENST00000578112 TEFQ10587 303 aa15.12■□□□□ 0.01
SMARCE1-214ENST00000578112 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
SMARCE1-214ENST00000578112 FER1L6Q2WGJ9 1857 aa15.11■□□□□ 0.01
SMARCE1-214ENST00000578112 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
SMARCE1-214ENST00000578112 FMNL2Q96PY5 1086 aa15.11■□□□□ 0.01
SMARCE1-214ENST00000578112 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
SMARCE1-214ENST00000578112 CFAP53Q96M91 514 aa15.11■□□□□ 0.01
SMARCE1-214ENST00000578112 VEGFAP15692 232 aaPredicted RBP15.1■□□□□ 0.01
SMARCE1-214ENST00000578112 HTATSF1O43719 755 aaKnown RBP15.1■□□□□ 0.01
SMARCE1-214ENST00000578112 STYK1Q6J9G0 422 aa15.1■□□□□ 0.01
SMARCE1-214ENST00000578112 RRAGCQ9HB90 399 aa15.09■□□□□ 0.01
SMARCE1-214ENST00000578112 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
SMARCE1-214ENST00000578112 COL11A2P13942 1736 aaPredicted RBP15.08■□□□□ 0
SMARCE1-214ENST00000578112 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
SMARCE1-214ENST00000578112 NPM2Q86SE8 214 aaKnown RBP15.08■□□□□ 0
SMARCE1-214ENST00000578112 DPY19L2Q6NUT2 758 aa15.07■□□□□ 0
SMARCE1-214ENST00000578112 NUDCQ9Y266 331 aa15.07■□□□□ 0
SMARCE1-214ENST00000578112 CANXP27824 592 aaKnown RBP15.07■□□□□ 0
SMARCE1-214ENST00000578112 IL17REQ8NFR9 667 aa15.07■□□□□ 0
SMARCE1-214ENST00000578112 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
SMARCE1-214ENST00000578112 CCDC88AQ3V6T2 1871 aa15.07■□□□□ 0
SMARCE1-214ENST00000578112 ST5P78524 1137 aa15.06■□□□□ 0
SMARCE1-214ENST00000578112 ZNF652Q9Y2D9 606 aa15.06■□□□□ 0
SMARCE1-214ENST00000578112 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
SMARCE1-214ENST00000578112 RASSF7Q02833 373 aa15.06■□□□□ 0
SMARCE1-214ENST00000578112 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ 0
SMARCE1-214ENST00000578112 PRR5LQ6MZQ0 368 aa15.05■□□□□ 0
SMARCE1-214ENST00000578112 NFKBIEO00221 500 aa15.05■□□□□ -0
SMARCE1-214ENST00000578112 TBC1D9BQ66K14 1250 aa15.05■□□□□ -0
SMARCE1-214ENST00000578112 SETDB2Q96T68 719 aa15.05■□□□□ -0
SMARCE1-214ENST00000578112 CAMTA2O94983 1202 aa15.04■□□□□ -0
SMARCE1-214ENST00000578112 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
SMARCE1-214ENST00000578112 SCN4AP35499 1836 aa15.04■□□□□ -0
SMARCE1-214ENST00000578112 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
SMARCE1-214ENST00000578112 CNBD1Q8NA66 436 aa15.04■□□□□ -0
SMARCE1-214ENST00000578112 MASTLQ96GX5 879 aa15.04■□□□□ -0
SMARCE1-214ENST00000578112 BTBD11A6QL63 1104 aa15.03■□□□□ -0
SMARCE1-214ENST00000578112 RIC1Q4ADV7 1423 aa15.03■□□□□ -0
SMARCE1-214ENST00000578112 KLRG2A4D1S0 409 aaPredicted RBP15.03■□□□□ -0
SMARCE1-214ENST00000578112 SNRPA1P09661 255 aaKnown RBP15.02■□□□□ -0
SMARCE1-214ENST00000578112 TAOK3Q9H2K8 898 aa15.02■□□□□ -0
SMARCE1-214ENST00000578112 IBTKQ9P2D0 1353 aaPredicted RBP15.02□□□□□ -0.01
SMARCE1-214ENST00000578112 PRELPP51888 382 aa15.01□□□□□ -0.01
SMARCE1-214ENST00000578112 GRIPAP1Q4V328 841 aa15.01□□□□□ -0.01
SMARCE1-214ENST00000578112 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-214ENST00000578112 PNISRQ8TF01 805 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-214ENST00000578112 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-214ENST00000578112 IQCA1LA6NCM1 817 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms