RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-206ENST00000576523 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
NCBP3-206ENST00000576523 RIPK4P57078 832 aa11.52□□□□□ -0.57
NCBP3-206ENST00000576523 EZH2Q15910 746 aaKnown RBP11.52□□□□□ -0.57
NCBP3-206ENST00000576523 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
NCBP3-206ENST00000576523 PNNQ9H307 717 aaKnown RBP11.52□□□□□ -0.57
NCBP3-206ENST00000576523 ASAP1Q9ULH1 1129 aa11.52□□□□□ -0.57
NCBP3-206ENST00000576523 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
NCBP3-206ENST00000576523 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
NCBP3-206ENST00000576523 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
NCBP3-206ENST00000576523 ATG3Q9NT62 314 aa11.51□□□□□ -0.57
NCBP3-206ENST00000576523 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
NCBP3-206ENST00000576523 COL24A1Q17RW2 1714 aa11.51□□□□□ -0.57
NCBP3-206ENST00000576523 PALLDQ8WX93 1383 aa11.51□□□□□ -0.57
NCBP3-206ENST00000576523 PLSCR1O15162 318 aa11.5□□□□□ -0.57
NCBP3-206ENST00000576523 KCNQ3O43525 872 aa11.5□□□□□ -0.57
NCBP3-206ENST00000576523 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
NCBP3-206ENST00000576523 KCNQ4P56696 695 aa11.5□□□□□ -0.57
NCBP3-206ENST00000576523 CABP4P57796 275 aa11.5□□□□□ -0.57
NCBP3-206ENST00000576523 SLC39A6Q13433 755 aa11.5□□□□□ -0.57
NCBP3-206ENST00000576523 LRRC4BQ9NT99 713 aa11.5□□□□□ -0.57
NCBP3-206ENST00000576523 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
NCBP3-206ENST00000576523 NEFMP07197 916 aa11.48□□□□□ -0.57
NCBP3-206ENST00000576523 BAG6P46379 1132 aa11.48□□□□□ -0.57
NCBP3-206ENST00000576523 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
NCBP3-206ENST00000576523 MIS18AQ9NYP9 233 aa11.48□□□□□ -0.57
NCBP3-206ENST00000576523 NUP98P52948 1817 aa11.48□□□□□ -0.57
NCBP3-206ENST00000576523 BCORQ6W2J9 1755 aa11.47□□□□□ -0.57
NCBP3-206ENST00000576523 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
NCBP3-206ENST00000576523 ITPK1Q13572 414 aa11.47□□□□□ -0.57
NCBP3-206ENST00000576523 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
NCBP3-206ENST00000576523 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
NCBP3-206ENST00000576523 HEG1Q9ULI3 1381 aa11.46□□□□□ -0.57
NCBP3-206ENST00000576523 NUBP1P53384 320 aa11.46□□□□□ -0.57
NCBP3-206ENST00000576523 TEFQ10587 303 aa11.46□□□□□ -0.57
NCBP3-206ENST00000576523 SF3B2Q13435 895 aaKnown RBP11.46□□□□□ -0.57
NCBP3-206ENST00000576523 CCDC27Q2M243 656 aa11.46□□□□□ -0.57
NCBP3-206ENST00000576523 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
NCBP3-206ENST00000576523 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
NCBP3-206ENST00000576523 LOC102724428A0A0B4J2F2 783 aa11.45□□□□□ -0.58
NCBP3-206ENST00000576523 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
NCBP3-206ENST00000576523 SIK1P57059 783 aa11.45□□□□□ -0.58
NCBP3-206ENST00000576523 TAF7Q15545 349 aaPredicted RBP11.45□□□□□ -0.58
NCBP3-206ENST00000576523 ZNF790Q6PG37 636 aa11.45□□□□□ -0.58
NCBP3-206ENST00000576523 ZNF496Q96IT1 587 aaPredicted RBP11.45□□□□□ -0.58
NCBP3-206ENST00000576523 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
NCBP3-206ENST00000576523 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
NCBP3-206ENST00000576523 BTBD11A6QL63 1104 aa11.44□□□□□ -0.58
NCBP3-206ENST00000576523 PTCD1O75127 700 aaKnown RBP11.44□□□□□ -0.58
NCBP3-206ENST00000576523 LMOD3Q0VAK6 560 aa11.44□□□□□ -0.58
NCBP3-206ENST00000576523 ZNF827Q17R98 1081 aa11.44□□□□□ -0.58
NCBP3-206ENST00000576523 AMIGO3Q86WK7 504 aa11.44□□□□□ -0.58
NCBP3-206ENST00000576523 LINC00116Q8NCU8 138 aa11.44□□□□□ -0.58
NCBP3-206ENST00000576523 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
NCBP3-206ENST00000576523 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
NCBP3-206ENST00000576523 ANKRD36CQ5JPF3 1778 aa11.44□□□□□ -0.58
NCBP3-206ENST00000576523 SCN7AQ01118 1682 aa11.43□□□□□ -0.58
NCBP3-206ENST00000576523 CHL1O00533 1208 aa11.43□□□□□ -0.58
NCBP3-206ENST00000576523 CCNL1Q9UK58 526 aaPredicted RBP11.43□□□□□ -0.58
NCBP3-206ENST00000576523 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
NCBP3-206ENST00000576523 KRT24Q2M2I5 525 aa11.42□□□□□ -0.58
NCBP3-206ENST00000576523 SLC27A3Q5K4L6 730 aa11.42□□□□□ -0.58
NCBP3-206ENST00000576523 DNAJC10Q8IXB1 793 aa11.42□□□□□ -0.58
NCBP3-206ENST00000576523 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
NCBP3-206ENST00000576523 STK24Q9Y6E0 443 aa11.42□□□□□ -0.58
NCBP3-206ENST00000576523 ARFGEF2Q9Y6D5 1785 aa11.41□□□□□ -0.58
NCBP3-206ENST00000576523 ATP6V1AP38606 617 aa11.41□□□□□ -0.58
NCBP3-206ENST00000576523 SMIM5Q71RC9 77 aa11.41□□□□□ -0.58
NCBP3-206ENST00000576523 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
NCBP3-206ENST00000576523 ARID3AQ99856 593 aa11.41□□□□□ -0.58
NCBP3-206ENST00000576523 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
NCBP3-206ENST00000576523 AK7Q96M32 723 aa11.4□□□□□ -0.58
NCBP3-206ENST00000576523 IFT57Q9NWB7 429 aa11.4□□□□□ -0.58
NCBP3-206ENST00000576523 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
NCBP3-206ENST00000576523 IL16Q14005 1332 aa11.39□□□□□ -0.59
NCBP3-206ENST00000576523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
NCBP3-206ENST00000576523 CYP19A1P11511 503 aaPredicted RBP11.39□□□□□ -0.59
NCBP3-206ENST00000576523 TTC5Q8N0Z6 440 aa11.39□□□□□ -0.59
NCBP3-206ENST00000576523 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NCBP3-206ENST00000576523 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
NCBP3-206ENST00000576523 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
NCBP3-206ENST00000576523 FMNL2Q96PY5 1086 aa11.39□□□□□ -0.59
NCBP3-206ENST00000576523 PDGFDQ9GZP0 370 aaPredicted RBP11.39□□□□□ -0.59
NCBP3-206ENST00000576523 BABAM1Q9NWV8 329 aa11.39□□□□□ -0.59
NCBP3-206ENST00000576523 LAS1LQ9Y4W2 734 aaKnown RBP11.39□□□□□ -0.59
NCBP3-206ENST00000576523 USP16Q9Y5T5 823 aa11.39□□□□□ -0.59
NCBP3-206ENST00000576523 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
NCBP3-206ENST00000576523 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
NCBP3-206ENST00000576523 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
NCBP3-206ENST00000576523 SMYD5Q6GMV2 418 aa11.38□□□□□ -0.59
NCBP3-206ENST00000576523 INTS5Q6P9B9 1019 aaKnown RBP11.38□□□□□ -0.59
NCBP3-206ENST00000576523 WDR63Q8IWG1 891 aa11.38□□□□□ -0.59
NCBP3-206ENST00000576523 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
NCBP3-206ENST00000576523 PNPLA7Q6ZV29 1317 aa11.37□□□□□ -0.59
NCBP3-206ENST00000576523 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
NCBP3-206ENST00000576523 N4BP2Q86UW6 1770 aaPredicted RBP11.37□□□□□ -0.59
NCBP3-206ENST00000576523 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
NCBP3-206ENST00000576523 CRKLP46109 303 aaKnown RBP11.37□□□□□ -0.59
NCBP3-206ENST00000576523 GNAI1P63096 354 aa11.37□□□□□ -0.59
NCBP3-206ENST00000576523 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
NCBP3-206ENST00000576523 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms