RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 SYCP1Q15431 976 aa18.47■□□□□ 0.55
SMG6-207ENST00000570756 SLC4A10Q6U841 1118 aa18.47■□□□□ 0.55
SMG6-207ENST00000570756 FIBPO43427 364 aa18.46■□□□□ 0.55
SMG6-207ENST00000570756 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
SMG6-207ENST00000570756 COG3Q96JB2 828 aa18.46■□□□□ 0.55
SMG6-207ENST00000570756 U2AF2P26368 475 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMG6-207ENST00000570756 GIMAP6Q6P9H5 292 aa18.45■□□□□ 0.54
SMG6-207ENST00000570756 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
SMG6-207ENST00000570756 SYT1P21579 422 aa18.45■□□□□ 0.54
SMG6-207ENST00000570756 NME9Q86XW9 330 aa18.45■□□□□ 0.54
SMG6-207ENST00000570756 OGFRQ9NZT2 677 aa18.45■□□□□ 0.54
SMG6-207ENST00000570756 SMC3Q9UQE7 1217 aa18.45■□□□□ 0.54
SMG6-207ENST00000570756 GNAI3P08754 354 aa18.44■□□□□ 0.54
SMG6-207ENST00000570756 LIMCH1Q9UPQ0 1083 aa18.44■□□□□ 0.54
SMG6-207ENST00000570756 A2ML1A8K2U0 1454 aa18.43■□□□□ 0.54
SMG6-207ENST00000570756 TPRNQ4KMQ1 711 aa18.43■□□□□ 0.54
SMG6-207ENST00000570756 SPC24Q8NBT2 197 aa18.43■□□□□ 0.54
SMG6-207ENST00000570756 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
SMG6-207ENST00000570756 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
SMG6-207ENST00000570756 RAD50Q92878 1312 aa18.42■□□□□ 0.54
SMG6-207ENST00000570756 AP5Z1O43299 807 aa18.42■□□□□ 0.54
SMG6-207ENST00000570756 RRS1Q15050 365 aaKnown RBP18.42■□□□□ 0.54
SMG6-207ENST00000570756 MCM10Q7L590 875 aa18.42■□□□□ 0.54
SMG6-207ENST00000570756 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 FAM200AQ8TCP9 573 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 TTC14Q96N46 770 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 UBR1Q8IWV7 1749 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 NRKQ7Z2Y5 1582 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 SMTNL1A8MU46 457 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 F6X3S4 739 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
SMG6-207ENST00000570756 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
SMG6-207ENST00000570756 AK2P54819 239 aa18.4■□□□□ 0.54
SMG6-207ENST00000570756 GABPB1Q06547 395 aaPredicted RBP18.4■□□□□ 0.54
SMG6-207ENST00000570756 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
SMG6-207ENST00000570756 NCBP1Q09161 790 aaKnown RBP18.4■□□□□ 0.54
SMG6-207ENST00000570756 UNC5CLQ8IV45 518 aa18.4■□□□□ 0.54
SMG6-207ENST00000570756 CGNQ9P2M7 1197 aaKnown RBP18.4■□□□□ 0.54
SMG6-207ENST00000570756 SNX14Q9Y5W7 946 aa18.4■□□□□ 0.54
SMG6-207ENST00000570756 ZNF771Q7L3S4 317 aaPredicted RBP18.39■□□□□ 0.53
SMG6-207ENST00000570756 PAXBP1Q9Y5B6 917 aa18.39■□□□□ 0.53
SMG6-207ENST00000570756 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
SMG6-207ENST00000570756 PTGS1P23219 599 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 G2E3Q7L622 706 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 STK31Q9BXU1 1019 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 SGSM2O43147 1006 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
SMG6-207ENST00000570756 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
SMG6-207ENST00000570756 PDIA4P13667 645 aaKnown RBP18.37■□□□□ 0.53
SMG6-207ENST00000570756 LTKP29376 864 aa18.37■□□□□ 0.53
SMG6-207ENST00000570756 CRB1P82279 1406 aa18.37■□□□□ 0.53
SMG6-207ENST00000570756 CEP170BQ9Y4F5 1589 aaPredicted RBP18.37■□□□□ 0.53
SMG6-207ENST00000570756 IL25Q9H293 177 aa18.37■□□□□ 0.53
SMG6-207ENST00000570756 CTNNA3Q9UI47 895 aa18.37■□□□□ 0.53
SMG6-207ENST00000570756 HSPA2P54652 639 aa18.36■□□□□ 0.53
SMG6-207ENST00000570756 ZSCAN31Q96LW9 406 aaPredicted RBP18.36■□□□□ 0.53
SMG6-207ENST00000570756 MTMR6Q9Y217 621 aa18.36■□□□□ 0.53
SMG6-207ENST00000570756 GJB2P29033 226 aa18.35■□□□□ 0.53
SMG6-207ENST00000570756 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
SMG6-207ENST00000570756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.35■□□□□ 0.53
SMG6-207ENST00000570756 NUP62CLQ9H1M0 184 aa18.35■□□□□ 0.53
SMG6-207ENST00000570756 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
SMG6-207ENST00000570756 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
SMG6-207ENST00000570756 WAPLQ7Z5K2 1190 aa18.35■□□□□ 0.53
SMG6-207ENST00000570756 DRC7Q8IY82 874 aa18.35■□□□□ 0.53
SMG6-207ENST00000570756 CCDC112Q8NEF3 446 aa18.35■□□□□ 0.53
SMG6-207ENST00000570756 TSPYL4Q9UJ04 414 aa18.35■□□□□ 0.53
SMG6-207ENST00000570756 TYRO3Q06418 890 aa18.34■□□□□ 0.53
SMG6-207ENST00000570756 C16orf45Q96MC5 204 aaPredicted RBP18.34■□□□□ 0.53
SMG6-207ENST00000570756 LSG1Q9H089 658 aaKnown RBP18.34■□□□□ 0.53
SMG6-207ENST00000570756 SOS1Q07889 1333 aaPredicted RBP18.34■□□□□ 0.53
SMG6-207ENST00000570756 RAB11FIP3O75154 756 aa18.34■□□□□ 0.53
SMG6-207ENST00000570756 TNNT1P13805 278 aa18.34■□□□□ 0.53
SMG6-207ENST00000570756 CCDC186Q7Z3E2 898 aa18.34■□□□□ 0.53
SMG6-207ENST00000570756 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
SMG6-207ENST00000570756 DDX41Q9UJV9 622 aaKnown RBP18.34■□□□□ 0.53
SMG6-207ENST00000570756 WASLO00401 505 aaPredicted RBP18.33■□□□□ 0.53
SMG6-207ENST00000570756 KRT85P78386 507 aa18.33■□□□□ 0.53
SMG6-207ENST00000570756 FGD1P98174 961 aa18.33■□□□□ 0.53
SMG6-207ENST00000570756 MRVI1Q9Y6F6 885 aa18.33■□□□□ 0.53
SMG6-207ENST00000570756 TMEM2Q9UHN6 1383 aa18.33■□□□□ 0.53
SMG6-207ENST00000570756 ELP1O95163 1332 aa18.33■□□□□ 0.52
SMG6-207ENST00000570756 CASTP20810 708 aaKnown RBP18.33■□□□□ 0.52
SMG6-207ENST00000570756 HYPKQ9NX55 129 aa18.33■□□□□ 0.52
SMG6-207ENST00000570756 CPS1P31327 1500 aa18.33■□□□□ 0.52
SMG6-207ENST00000570756 VPS53Q5VIR6 699 aa18.32■□□□□ 0.52
SMG6-207ENST00000570756 CCDC83Q8IWF9 413 aa18.32■□□□□ 0.52
SMG6-207ENST00000570756 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
SMG6-207ENST00000570756 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
SMG6-207ENST00000570756 VPS37CA5D8V6 355 aaPredicted RBP18.32■□□□□ 0.52
SMG6-207ENST00000570756 FLIIQ13045 1269 aa18.32■□□□□ 0.52
SMG6-207ENST00000570756 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
SMG6-207ENST00000570756 CCDC171Q6TFL3 1326 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 ZSCAN25Q6NSZ9 544 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 LUZP1Q86V48 1076 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 IL1RAPL2Q9NP60 686 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 MORC2Q9Y6X9 1032 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms