RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 RHPN1Q8TCX5 695 aa14.14□□□□□ -0.15
PDXDC1-217ENST00000570001 MCM4P33991 863 aa14.14□□□□□ -0.15
PDXDC1-217ENST00000570001 DDX49Q9Y6V7 483 aaKnown RBP14.14□□□□□ -0.15
PDXDC1-217ENST00000570001 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
PDXDC1-217ENST00000570001 C3P01024 1663 aa14.14□□□□□ -0.15
PDXDC1-217ENST00000570001 CRB1P82279 1406 aa14.14□□□□□ -0.15
PDXDC1-217ENST00000570001 KNDC1Q76NI1 1749 aa14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 PTCD1O75127 700 aaKnown RBP14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 ALDH1L1O75891 902 aa14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 RBM25P49756 843 aaKnown RBP14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 PNMA6EA0A0J9YXQ4 647 aa14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 MCM2P49736 904 aa14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 TRAK2O60296 914 aa14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 GLRX3O76003 335 aaKnown RBP14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 FSD1Q9BTV5 496 aa14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 NAP1L2Q9ULW6 460 aaPredicted RBP14.13□□□□□ -0.15
PDXDC1-217ENST00000570001 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.12□□□□□ -0.15
PDXDC1-217ENST00000570001 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
PDXDC1-217ENST00000570001 ZNF790Q6PG37 636 aa14.12□□□□□ -0.15
PDXDC1-217ENST00000570001 SNX21Q969T3 373 aa14.12□□□□□ -0.15
PDXDC1-217ENST00000570001 DCAF5Q96JK2 942 aa14.12□□□□□ -0.15
PDXDC1-217ENST00000570001 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 XAGE3Q8WTP9 111 aa14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 NEUROD6Q96NK8 337 aa14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 GSPT1P15170 499 aaKnown RBP14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 CWF19L2Q2TBE0 894 aaKnown RBP14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 COPS6Q7L5N1 327 aa14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 LINS1Q8NG48 757 aa14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 USP44Q9H0E7 712 aa14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 GRM8O00222 908 aa14.11□□□□□ -0.15
PDXDC1-217ENST00000570001 ANKRD13DQ6ZTN6 518 aa14.1□□□□□ -0.15
PDXDC1-217ENST00000570001 ZCRB1Q8TBF4 217 aaKnown RBP14.1□□□□□ -0.15
PDXDC1-217ENST00000570001 HIP1O00291 1037 aa14.1□□□□□ -0.15
PDXDC1-217ENST00000570001 NBPF7P0C2Y1 421 aaPredicted RBP14.1□□□□□ -0.15
PDXDC1-217ENST00000570001 RNF20Q5VTR2 975 aa14.1□□□□□ -0.15
PDXDC1-217ENST00000570001 GIGYF1O75420 1035 aaPredicted RBP14.1□□□□□ -0.15
PDXDC1-217ENST00000570001 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
PDXDC1-217ENST00000570001 ERBB3P21860 1342 aa14.09□□□□□ -0.15
PDXDC1-217ENST00000570001 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
PDXDC1-217ENST00000570001 CWC22Q9HCG8 908 aaKnown RBP14.09□□□□□ -0.15
PDXDC1-217ENST00000570001 MON2Q7Z3U7 1717 aa14.09□□□□□ -0.15
PDXDC1-217ENST00000570001 PIP4K2AP48426 406 aaPredicted RBP14.09□□□□□ -0.15
PDXDC1-217ENST00000570001 FOXD4L6Q3SYB3 417 aaPredicted RBP14.08□□□□□ -0.15
PDXDC1-217ENST00000570001 FOXD4L3Q6VB84 417 aaPredicted RBP14.08□□□□□ -0.15
PDXDC1-217ENST00000570001 KIF6Q6ZMV9 814 aa14.08□□□□□ -0.15
PDXDC1-217ENST00000570001 SSH2Q76I76 1423 aa14.08□□□□□ -0.16
PDXDC1-217ENST00000570001 TMOD3Q9NYL9 352 aa14.08□□□□□ -0.16
PDXDC1-217ENST00000570001 ECHDC1Q9NTX5 307 aa14.08□□□□□ -0.16
PDXDC1-217ENST00000570001 A0A087WZG4 1122 aa14.08□□□□□ -0.16
PDXDC1-217ENST00000570001 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
PDXDC1-217ENST00000570001 ESYT1Q9BSJ8 1104 aa14.08□□□□□ -0.16
PDXDC1-217ENST00000570001 AXIN2Q9Y2T1 843 aa14.08□□□□□ -0.16
PDXDC1-217ENST00000570001 ATP5J2-PTCD1G3V325 749 aa14.07□□□□□ -0.16
PDXDC1-217ENST00000570001 USP26Q9BXU7 913 aa14.07□□□□□ -0.16
PDXDC1-217ENST00000570001 CCDC8Q9H0W5 538 aaPredicted RBP14.07□□□□□ -0.16
PDXDC1-217ENST00000570001 HSP90B1P14625 803 aaKnown RBP14.07□□□□□ -0.16
PDXDC1-217ENST00000570001 UBE3BQ7Z3V4 1068 aa14.07□□□□□ -0.16
PDXDC1-217ENST00000570001 UPF3BQ9BZI7 483 aaKnown RBP14.07□□□□□ -0.16
PDXDC1-217ENST00000570001 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
PDXDC1-217ENST00000570001 PHKG2P15735 406 aa14.06□□□□□ -0.16
PDXDC1-217ENST00000570001 JARID2Q92833 1246 aaPredicted RBP14.06□□□□□ -0.16
PDXDC1-217ENST00000570001 NPHP1O15259 732 aa14.06□□□□□ -0.16
PDXDC1-217ENST00000570001 BEND3Q5T5X7 828 aa14.06□□□□□ -0.16
PDXDC1-217ENST00000570001 SLAIN2Q9P270 581 aa14.06□□□□□ -0.16
PDXDC1-217ENST00000570001 IL2RBP14784 551 aa14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 ZNF496Q96IT1 587 aaPredicted RBP14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 BOLA2Q9H3K6 86 aa14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 NRKQ7Z2Y5 1582 aa14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 GOLGA6L4A6NEF3 574 aa14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 SMC3Q9UQE7 1217 aa14.05□□□□□ -0.16
PDXDC1-217ENST00000570001 C1orf167Q5SNV9 1468 aa14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 ZBTB3Q9H5J0 574 aa14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 PCDH11XQ9BZA7 1347 aa14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 PCDH11YQ9BZA8 1340 aa14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 AKAP12Q02952 1782 aa14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 CHMLP26374 656 aa14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 LRRFIP1Q32MZ4 808 aaKnown RBP14.04□□□□□ -0.16
PDXDC1-217ENST00000570001 IBTKQ9P2D0 1353 aaPredicted RBP14.03□□□□□ -0.16
PDXDC1-217ENST00000570001 STARD3NLO95772 234 aa14.03□□□□□ -0.16
PDXDC1-217ENST00000570001 PSMA5P28066 241 aa14.03□□□□□ -0.16
PDXDC1-217ENST00000570001 PROSER3Q2NL68 480 aa14.03□□□□□ -0.16
PDXDC1-217ENST00000570001 BICC1Q9H694 974 aaKnown RBP14.03□□□□□ -0.16
PDXDC1-217ENST00000570001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.161e-7■■■□□ 14.6
PDXDC1-217ENST00000570001 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
PDXDC1-217ENST00000570001 EVI5LQ96CN4 794 aa14.03□□□□□ -0.16
PDXDC1-217ENST00000570001 SSFA2P28290 1259 aa14.02□□□□□ -0.16
PDXDC1-217ENST00000570001 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.02□□□□□ -0.16
PDXDC1-217ENST00000570001 PRAMEF22A3QJZ6 481 aa14.02□□□□□ -0.16
PDXDC1-217ENST00000570001 CCDC57Q2TAC2 916 aa14.02□□□□□ -0.16
PDXDC1-217ENST00000570001 CYP46A1Q9Y6A2 500 aa14.02□□□□□ -0.17
PDXDC1-217ENST00000570001 NCAPD2Q15021 1401 aa14.02□□□□□ -0.17
PDXDC1-217ENST00000570001 TTC41PQ6P2S7 1318 aa14.02□□□□□ -0.17
PDXDC1-217ENST00000570001 CWC25Q9NXE8 425 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-217ENST00000570001 JAKMIP1Q96N16 626 aaKnown RBP14.01□□□□□ -0.17
PDXDC1-217ENST00000570001 AOX1Q06278 1338 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms