RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
CDH11-214ENST00000568340 PALLDQ8WX93 1383 aa13.28□□□□□ -0.28
CDH11-214ENST00000568340 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
CDH11-214ENST00000568340 NBPF14Q5TI25 921 aa13.27□□□□□ -0.29
CDH11-214ENST00000568340 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.29
CDH11-214ENST00000568340 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
CDH11-214ENST00000568340 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.29
CDH11-214ENST00000568340 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
CDH11-214ENST00000568340 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
CDH11-214ENST00000568340 ERBB4Q15303 1308 aa13.27□□□□□ -0.29
CDH11-214ENST00000568340 ADCY9O60503 1353 aa13.26□□□□□ -0.29
CDH11-214ENST00000568340 PTPRCP08575 1304 aa13.26□□□□□ -0.29
CDH11-214ENST00000568340 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
CDH11-214ENST00000568340 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
CDH11-214ENST00000568340 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 EP400Q96L91 3159 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 A0A0G2JS52 829 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 MYT1Q01538 1121 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 FLIIQ13045 1269 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 ITPK1Q13572 414 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 FKBP8Q14318 412 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 DNAJC10Q8IXB1 793 aa13.25□□□□□ -0.29
CDH11-214ENST00000568340 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDH11-214ENST00000568340 IBTKQ9P2D0 1353 aaPredicted RBP13.24□□□□□ -0.29
CDH11-214ENST00000568340 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
CDH11-214ENST00000568340 ANXA1P04083 346 aa13.24□□□□□ -0.29
CDH11-214ENST00000568340 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
CDH11-214ENST00000568340 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
CDH11-214ENST00000568340 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
CDH11-214ENST00000568340 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
CDH11-214ENST00000568340 PHAXQ9H814 394 aaKnown RBP13.24□□□□□ -0.29
CDH11-214ENST00000568340 RGPD3A6NKT7 1758 aaPredicted RBP13.24□□□□□ -0.29
CDH11-214ENST00000568340 RGPD4Q7Z3J3 1758 aa13.24□□□□□ -0.29
CDH11-214ENST00000568340 ATP10DQ9P241 1426 aa13.23□□□□□ -0.29
CDH11-214ENST00000568340 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
CDH11-214ENST00000568340 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
CDH11-214ENST00000568340 EIF2S2P20042 333 aaKnown RBP13.23□□□□□ -0.29
CDH11-214ENST00000568340 SIK1P57059 783 aa13.23□□□□□ -0.29
CDH11-214ENST00000568340 FAM196AQ6ZSG2 479 aa13.23□□□□□ -0.29
CDH11-214ENST00000568340 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
CDH11-214ENST00000568340 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
CDH11-214ENST00000568340 FRAT1Q92837 279 aaPredicted RBP13.23□□□□□ -0.29
CDH11-214ENST00000568340 SYTL4Q96C24 671 aaPredicted RBP13.23□□□□□ -0.29
CDH11-214ENST00000568340 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
CDH11-214ENST00000568340 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
CDH11-214ENST00000568340 MYH14Q7Z406 1995 aaKnown RBP13.22□□□□□ -0.29
CDH11-214ENST00000568340 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
CDH11-214ENST00000568340 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
CDH11-214ENST00000568340 API5Q9BZZ5 524 aaKnown RBP13.22□□□□□ -0.29
CDH11-214ENST00000568340 TAF1LQ8IZX4 1826 aa13.22□□□□□ -0.29
CDH11-214ENST00000568340 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
CDH11-214ENST00000568340 INTS3Q68E01 1043 aaKnown RBP13.21□□□□□ -0.29
CDH11-214ENST00000568340 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
CDH11-214ENST00000568340 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
CDH11-214ENST00000568340 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
CDH11-214ENST00000568340 A1BGP04217 495 aa13.2□□□□□ -0.3
CDH11-214ENST00000568340 NEFLP07196 543 aa13.2□□□□□ -0.3
CDH11-214ENST00000568340 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
CDH11-214ENST00000568340 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
CDH11-214ENST00000568340 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
CDH11-214ENST00000568340 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
CDH11-214ENST00000568340 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
CDH11-214ENST00000568340 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
CDH11-214ENST00000568340 CNTNAP4Q9C0A0 1308 aa13.19□□□□□ -0.3
CDH11-214ENST00000568340 F6X3S4 739 aa13.19□□□□□ -0.3
CDH11-214ENST00000568340 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
CDH11-214ENST00000568340 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
CDH11-214ENST00000568340 SRCAPQ6ZRS2 3230 aa13.19□□□□□ -0.3
CDH11-214ENST00000568340 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
CDH11-214ENST00000568340 BCORQ6W2J9 1755 aa13.18□□□□□ -0.3
CDH11-214ENST00000568340 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CDH11-214ENST00000568340 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
CDH11-214ENST00000568340 MS4A1P11836 297 aa13.17□□□□□ -0.3
CDH11-214ENST00000568340 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
CDH11-214ENST00000568340 XAGE3Q8WTP9 111 aa13.17□□□□□ -0.3
CDH11-214ENST00000568340 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
CDH11-214ENST00000568340 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
CDH11-214ENST00000568340 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 ZBTB7BO15156 539 aaPredicted RBP13.16□□□□□ -0.3
CDH11-214ENST00000568340 TRIM37O94972 964 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 STARD3NLO95772 234 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
CDH11-214ENST00000568340 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
CDH11-214ENST00000568340 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
CDH11-214ENST00000568340 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 TTLL7Q6ZT98 887 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 PROM2Q8N271 834 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
CDH11-214ENST00000568340 MYL6BP14649 208 aa13.15□□□□□ -0.3
CDH11-214ENST00000568340 IL6STP40189 918 aaPredicted RBP13.15□□□□□ -0.3
CDH11-214ENST00000568340 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
CDH11-214ENST00000568340 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
CDH11-214ENST00000568340 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
CDH11-214ENST00000568340 DNAAF4Q8WXU2 420 aa13.15□□□□□ -0.3
CDH11-214ENST00000568340 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
CDH11-214ENST00000568340 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
CDH11-214ENST00000568340 KDM2BQ8NHM5 1336 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms