RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SMARCC1Q92922 1105 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 TBC1D2BQ9UPU7 963 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 AMOTL1Q8IY63 956 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 FEZ1Q99689 392 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 KIF20AO95235 890 aa14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 KLHL10Q6JEL2 608 aa14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 BOLA2Q9H3K6 86 aa14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 GOLGA6L7A0A1B0GV03 622 aa14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 SLU7O95391 586 aaKnown RBP14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 GTF2A1P52655 376 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 C16orf71Q8IYS4 520 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 DNAI1Q9UI46 699 aa14.46□□□□□ -0.09
CSPG4P13-202ENST00000567704 MAP9Q49MG5 647 aa14.46□□□□□ -0.1
CSPG4P13-202ENST00000567704 PTPRKQ15262 1439 aa14.46□□□□□ -0.1
CSPG4P13-202ENST00000567704 PSME1Q06323 249 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 C17orf53Q8N3J3 647 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 RAI14Q9P0K7 980 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 CAVIN2O95810 425 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 U2AF2P26368 475 aaKnown RBP eCLIP14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 ZNF397Q8NF99 534 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 TERF1P54274 439 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 ISM2Q6H9L7 571 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 DACT1Q9NYF0 836 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 SLC3A2P08195 630 aaKnown RBP14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 TAX1BP1Q86VP1 789 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 NECAB1Q8N987 351 aa14.45□□□□□ -0.1
CSPG4P13-202ENST00000567704 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 DNM1Q05193 864 aaKnown RBP14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 STIM1Q13586 685 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 CCAR1Q8IX12 1150 aaKnown RBP14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 DNAJC25Q9H1X3 360 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 ERLIN2O94905 339 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 FKBP4Q02790 459 aaKnown RBP eCLIP14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 ARFGAP3Q9NP61 516 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 MNAT1P51948 309 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 EIF5P55010 431 aaKnown RBP14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 CCDC158Q5M9N0 1113 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 MYRIPQ8NFW9 859 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 TSC1Q92574 1164 aa14.44□□□□□ -0.1
CSPG4P13-202ENST00000567704 MCM6Q14566 821 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 TTC39AQ5SRH9 613 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 NUP133Q8WUM0 1156 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 PPFIA3O75145 1194 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 CDKL5O76039 1030 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 RNF187Q5TA31 235 aaPredicted RBP14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 CCDC12Q8WUD4 166 aaPredicted RBP14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 C8orf76Q96K31 380 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 FAM107BQ9H098 131 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 LUC7LQ9NQ29 371 aaKnown RBP14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 RSPH14Q9UHP6 348 aa14.43□□□□□ -0.1
CSPG4P13-202ENST00000567704 CD109Q6YHK3 1445 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 RIOK3O14730 519 aaKnown RBP14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 CCT2P78371 535 aaKnown RBP14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 CCDC150Q8NCX0 1101 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 ZBTB9Q96C00 473 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 CCDC69A6NI79 296 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 KIF14Q15058 1648 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 TXNDC2Q86VQ3 553 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 TYRO3Q06418 890 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 TANGO6Q9C0B7 1094 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 CTNNA3Q9UI47 895 aa14.42□□□□□ -0.1
CSPG4P13-202ENST00000567704 F13A1P00488 732 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 ZNF445P59923 1031 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 CCDC8Q9H0W5 538 aaPredicted RBP14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 NLRP2Q9NX02 1062 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 ZFYVE27Q5T4F4 411 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 DNAAF4Q8WXU2 420 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 ESYT1Q9BSJ8 1104 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 ATAD2Q6PL18 1390 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 PDE1AP54750 535 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 G3V3G9 751 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 DCAF8Q5TAQ9 597 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 C10orf67Q8IYJ2 551 aa14.41□□□□□ -0.1
CSPG4P13-202ENST00000567704 LIG1P18858 919 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 PLEKHO1Q53GL0 409 aaPredicted RBP14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 GTF3C6Q969F1 213 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 MBIPQ9NS73 344 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 DISP1Q96F81 1524 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 IRX3P78415 501 aaPredicted RBP14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 CTR9Q6PD62 1173 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 CDK5RAP3Q96JB5 506 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 TCEANC2Q96MN5 208 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 MYL6BP14649 208 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 ABTB2Q8N961 1025 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 GOLGA6L9A6NEM1 432 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 MEIS3Q99687 375 aa14.4□□□□□ -0.1
CSPG4P13-202ENST00000567704 VGLL3A8MV65 326 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 MCM3P25205 808 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 CNNM3Q8NE01 707 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 LUZP1Q86V48 1076 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 EMILIN1Q9Y6C2 1016 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms