RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 VPS72Q15906 364 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 IL13P35225 146 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 COL24A1Q17RW2 1714 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 TTC22Q5TAA0 569 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 CFAP44Q96MT7 982 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 API5Q9BZZ5 524 aaKnown RBP7.93□□□□□ -1.14
GINS3-206ENST00000567143 ADAMTS7Q9UKP4 1686 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 LRRC37A3O60309 1634 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 SHANK3Q9BYB0 1731 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 DDIT3P35638 169 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 ZSCAN23Q3MJ62 389 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 RBSNQ9H1K0 784 aa7.93□□□□□ -1.14
GINS3-206ENST00000567143 IL16Q14005 1332 aa7.92□□□□□ -1.14
GINS3-206ENST00000567143 PTMAP06454 111 aaKnown RBP7.92□□□□□ -1.14
GINS3-206ENST00000567143 ARHGEF25Q86VW2 580 aa7.92□□□□□ -1.14
GINS3-206ENST00000567143 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
GINS3-206ENST00000567143 IFT57Q9NWB7 429 aa7.92□□□□□ -1.14
GINS3-206ENST00000567143 THRAP3Q9Y2W1 955 aaKnown RBP7.92□□□□□ -1.14
GINS3-206ENST00000567143 INTS3Q68E01 1043 aaKnown RBP7.92□□□□□ -1.14
GINS3-206ENST00000567143 CASC1Q6TDU7 716 aa7.92□□□□□ -1.14
GINS3-206ENST00000567143 BARGINQ6ZT62 677 aa7.92□□□□□ -1.14
GINS3-206ENST00000567143 USP26Q9BXU7 913 aa7.92□□□□□ -1.14
GINS3-206ENST00000567143 ST18O60284 1047 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 FKBP5Q13451 457 aaPredicted RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 CEP85Q6P2H3 762 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 NGDNQ8NEJ9 315 aaKnown RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 TSPYL4Q9UJ04 414 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 CHMP3Q9Y3E7 222 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 RABEP1Q15276 862 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 SKOR2Q2VWA4 1001 aaPredicted RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 PALD1Q9ULE6 856 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 COL3A1P02461 1466 aaPredicted RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 EIF4A2Q14240 407 aaKnown RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 JARID2Q92833 1246 aaPredicted RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 ZNF830Q96NB3 372 aaPredicted RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 DCTPP1Q9H773 170 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 CIZ1Q9ULV3 898 aaPredicted RBP7.91□□□□□ -1.14
GINS3-206ENST00000567143 RGPD5Q99666 1765 aa7.91□□□□□ -1.14
GINS3-206ENST00000567143 EIF2S2P20042 333 aaKnown RBP7.9□□□□□ -1.14
GINS3-206ENST00000567143 NUTM1Q86Y26 1132 aa7.9□□□□□ -1.14
GINS3-206ENST00000567143 UNC5CLQ8IV45 518 aa7.9□□□□□ -1.14
GINS3-206ENST00000567143 GPT2Q8TD30 523 aa7.9□□□□□ -1.14
GINS3-206ENST00000567143 DDX17Q92841 729 aaKnown RBP7.9□□□□□ -1.14
GINS3-206ENST00000567143 ABCC4O15439 1325 aa7.9□□□□□ -1.14
GINS3-206ENST00000567143 FAM177BA6PVY3 158 aa7.9□□□□□ -1.14
GINS3-206ENST00000567143 KLHL40Q2TBA0 621 aa7.9□□□□□ -1.14
GINS3-206ENST00000567143 RTF1Q92541 710 aaKnown RBP7.9□□□□□ -1.14
GINS3-206ENST00000567143 LMBRD1Q9NUN5 540 aa7.9□□□□□ -1.14
GINS3-206ENST00000567143 SPATA31A5Q5VU36 1347 aa7.9□□□□□ -1.15
GINS3-206ENST00000567143 SPATA31A7Q8IWB4 1347 aa7.9□□□□□ -1.15
GINS3-206ENST00000567143 CRB1P82279 1406 aa7.9□□□□□ -1.15
GINS3-206ENST00000567143 GCP02774 474 aa7.9□□□□□ -1.15
GINS3-206ENST00000567143 ANXA1P04083 346 aa7.9□□□□□ -1.15
GINS3-206ENST00000567143 DNTTIP2Q5QJE6 756 aaKnown RBP7.9□□□□□ -1.15
GINS3-206ENST00000567143 TSC1Q92574 1164 aa7.9□□□□□ -1.15
GINS3-206ENST00000567143 TMEM63CQ9P1W3 806 aa7.9□□□□□ -1.15
GINS3-206ENST00000567143 RGS12O14924 1447 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 CPA1P15085 419 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 USHBP1Q8N6Y0 703 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 ZMYND15Q9H091 742 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 CHMP4BQ9H444 224 aaKnown RBP7.89□□□□□ -1.15
GINS3-206ENST00000567143 ZDHHC9Q9Y397 364 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 RREB1Q92766 1687 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 TNS1Q9HBL0 1735 aaKnown RBP7.89□□□□□ -1.15
GINS3-206ENST00000567143 BRWD3Q6RI45 1802 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 PNMA6EA0A0J9YXQ4 647 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 C17orf53Q8N3J3 647 aaPredicted RBP7.89□□□□□ -1.15
GINS3-206ENST00000567143 ANKRD44Q8N8A2 993 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 TMX3Q96JJ7 454 aa7.89□□□□□ -1.15
GINS3-206ENST00000567143 NUCB2P80303 420 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 ZSCAN30Q86W11 494 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 TRPC5Q9UL62 973 aaPredicted RBP7.88□□□□□ -1.15
GINS3-206ENST00000567143 ERC2O15083 957 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 REC8O95072 547 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 LMOD3Q0VAK6 560 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 CCDC173Q0VFZ6 552 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 GLIPR1L2Q4G1C9 344 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 AFF2P51816 1311 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 KIAA0232Q92628 1395 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 GADD45BO75293 160 aaPredicted RBP7.88□□□□□ -1.15
GINS3-206ENST00000567143 ZNF853P0CG23 659 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 PDE1AP54750 535 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 ARHGAP45Q92619 1136 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 IL25Q9H293 177 aa7.88□□□□□ -1.15
GINS3-206ENST00000567143 NHSQ6T4R5 1651 aa7.87□□□□□ -1.15
GINS3-206ENST00000567143 MAP2P11137 1827 aaKnown RBP7.87□□□□□ -1.15
GINS3-206ENST00000567143 AMPHP49418 695 aa7.87□□□□□ -1.15
GINS3-206ENST00000567143 RBM6P78332 1123 aaKnown RBP7.87□□□□□ -1.15
GINS3-206ENST00000567143 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
GINS3-206ENST00000567143 SPATA31A1Q5TZJ5 1347 aa7.87□□□□□ -1.15
GINS3-206ENST00000567143 VIRMAQ69YN4 1812 aaKnown RBP7.87□□□□□ -1.15
GINS3-206ENST00000567143 MTHFSDQ2M296 383 aaKnown RBP7.87□□□□□ -1.15
GINS3-206ENST00000567143 IP6K1Q92551 441 aa7.87□□□□□ -1.15
GINS3-206ENST00000567143 STK31Q9BXU1 1019 aa7.87□□□□□ -1.15
GINS3-206ENST00000567143 TAOK2Q9UL54 1235 aa7.87□□□□□ -1.15
GINS3-206ENST00000567143 LRRFIP2Q9Y608 721 aaKnown RBP7.87□□□□□ -1.15
GINS3-206ENST00000567143 SBF2Q86WG5 1849 aa7.87□□□□□ -1.15
GINS3-206ENST00000567143 ABTB2Q8N961 1025 aa7.86□□□□□ -1.15
GINS3-206ENST00000567143 WDR17Q8IZU2 1322 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms