RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 RAD50Q92878 1312 aa29.84■■■□□ 2.37
FANCA-221ENST00000566889 AK2P54819 239 aa29.83■■■□□ 2.37
FANCA-221ENST00000566889 TPRNQ4KMQ1 711 aa29.83■■■□□ 2.37
FANCA-221ENST00000566889 CREBRFQ8IUR6 639 aa29.83■■■□□ 2.37
FANCA-221ENST00000566889 RTF1Q92541 710 aaKnown RBP29.83■■■□□ 2.37
FANCA-221ENST00000566889 SLC4A2P04920 1241 aa29.82■■■□□ 2.36
FANCA-221ENST00000566889 PDIA4P13667 645 aaKnown RBP29.82■■■□□ 2.36
FANCA-221ENST00000566889 ZNF397Q8NF99 534 aaPredicted RBP29.82■■■□□ 2.36
FANCA-221ENST00000566889 DNM1Q05193 864 aaKnown RBP29.81■■■□□ 2.36
FANCA-221ENST00000566889 PDE4CQ08493 712 aa29.81■■■□□ 2.36
FANCA-221ENST00000566889 SNX14Q9Y5W7 946 aa29.81■■■□□ 2.36
FANCA-221ENST00000566889 ZSCAN25Q6NSZ9 544 aa29.81■■■□□ 2.36
FANCA-221ENST00000566889 MTMR6Q9Y217 621 aa29.81■■■□□ 2.36
FANCA-221ENST00000566889 MRVI1Q9Y6F6 885 aa29.81■■■□□ 2.36
FANCA-221ENST00000566889 TYRO3Q06418 890 aa29.8■■■□□ 2.36
FANCA-221ENST00000566889 RUFY3Q7L099 469 aa29.8■■■□□ 2.36
FANCA-221ENST00000566889 NUP62CLQ9H1M0 184 aa29.8■■■□□ 2.36
FANCA-221ENST00000566889 PLA2G4DQ86XP0 818 aa29.8■■■□□ 2.36
FANCA-221ENST00000566889 DRC7Q8IY82 874 aa29.8■■■□□ 2.36
FANCA-221ENST00000566889 POGZQ7Z3K3 1410 aa29.79■■■□□ 2.36
FANCA-221ENST00000566889 EDC4Q6P2E9 1401 aaKnown RBP29.78■■■□□ 2.36
FANCA-221ENST00000566889 GNAI3P08754 354 aa29.78■■■□□ 2.36
FANCA-221ENST00000566889 ZNF75DP51815 510 aa29.78■■■□□ 2.36
FANCA-221ENST00000566889 ATP8B2P98198 1209 aa29.78■■■□□ 2.36
FANCA-221ENST00000566889 UNC5CLQ8IV45 518 aa29.78■■■□□ 2.36
FANCA-221ENST00000566889 FAM53CQ9NYF3 392 aa29.78■■■□□ 2.36
FANCA-221ENST00000566889 ARHGEF10O15013 1369 aa29.78■■■□□ 2.36
FANCA-221ENST00000566889 ELP1O95163 1332 aa29.77■■■□□ 2.36
FANCA-221ENST00000566889 TPD52L1Q16890 204 aaPredicted RBP29.77■■■□□ 2.36
FANCA-221ENST00000566889 CDK11BP21127 795 aaKnown RBP29.76■■■□□ 2.36
FANCA-221ENST00000566889 LRMPQ12912 555 aa29.76■■■□□ 2.36
FANCA-221ENST00000566889 SLC4A10Q6U841 1118 aa29.76■■■□□ 2.36
FANCA-221ENST00000566889 ZSCAN31Q96LW9 406 aaPredicted RBP29.76■■■□□ 2.36
FANCA-221ENST00000566889 CCDC171Q6TFL3 1326 aa29.76■■■□□ 2.35
FANCA-221ENST00000566889 SGSM2O43147 1006 aa29.76■■■□□ 2.35
FANCA-221ENST00000566889 GJB2P29033 226 aa29.76■■■□□ 2.35
FANCA-221ENST00000566889 LUZP1Q86V48 1076 aa29.76■■■□□ 2.35
FANCA-221ENST00000566889 TIGD1Q96MW7 591 aa29.76■■■□□ 2.35
FANCA-221ENST00000566889 CEP135Q66GS9 1140 aa29.75■■■□□ 2.35
FANCA-221ENST00000566889 TDRD7Q8NHU6 1098 aaKnown RBP29.75■■■□□ 2.35
FANCA-221ENST00000566889 SH2B1Q9NRF2 756 aaPredicted RBP29.75■■■□□ 2.35
FANCA-221ENST00000566889 MLH3Q9UHC1 1453 aa29.75■■■□□ 2.35
FANCA-221ENST00000566889 SLC20A2Q08357 652 aa29.75■■■□□ 2.35
FANCA-221ENST00000566889 TRIM5Q9C035 493 aa29.75■■■□□ 2.35
FANCA-221ENST00000566889 IL25Q9H293 177 aa29.75■■■□□ 2.35
FANCA-221ENST00000566889 CBX8Q9HC52 389 aa29.75■■■□□ 2.35
FANCA-221ENST00000566889 CDC25BP30305 580 aa29.74■■■□□ 2.35
FANCA-221ENST00000566889 SLFNL1Q499Z3 407 aa29.74■■■□□ 2.35
FANCA-221ENST00000566889 KRT85P78386 507 aa29.73■■■□□ 2.35
FANCA-221ENST00000566889 SLC52A1Q9NWF4 448 aa29.73■■■□□ 2.35
FANCA-221ENST00000566889 CALCOCO1Q9P1Z2 691 aa29.73■■■□□ 2.35
FANCA-221ENST00000566889 NEMFO60524 1076 aa29.73■■■□□ 2.35
FANCA-221ENST00000566889 LSG1Q9H089 658 aaKnown RBP29.72■■■□□ 2.35
FANCA-221ENST00000566889 PREX1Q8TCU6 1659 aa29.72■■■□□ 2.35
FANCA-221ENST00000566889 KCNJ4P48050 445 aa29.71■■■□□ 2.35
FANCA-221ENST00000566889 IDI1Q13907 227 aa29.71■■■□□ 2.35
FANCA-221ENST00000566889 NAA30Q147X3 362 aaPredicted RBP29.71■■■□□ 2.35
FANCA-221ENST00000566889 TNMDQ9H2S6 317 aa29.71■■■□□ 2.35
FANCA-221ENST00000566889 HYPKQ9NX55 129 aa29.71■■■□□ 2.35
FANCA-221ENST00000566889 CAVIN2O95810 425 aa29.71■■■□□ 2.35
FANCA-221ENST00000566889 IRX5P78411 483 aaPredicted RBP29.71■■■□□ 2.35
FANCA-221ENST00000566889 ANO6Q4KMQ2 910 aa29.71■■■□□ 2.35
FANCA-221ENST00000566889 RBM43Q6ZSC3 357 aaKnown RBP29.71■■■□□ 2.35
FANCA-221ENST00000566889 DDX19AQ9NUU7 478 aaKnown RBP29.71■■■□□ 2.35
FANCA-221ENST00000566889 NRBP1Q9UHY1 535 aa29.71■■■□□ 2.35
FANCA-221ENST00000566889 F6X3S4 739 aa29.7■■■□□ 2.35
FANCA-221ENST00000566889 VPS53Q5VIR6 699 aa29.7■■■□□ 2.35
FANCA-221ENST00000566889 PNMA6EA0A0J9YXQ4 647 aa29.69■■■□□ 2.34
FANCA-221ENST00000566889 KMT5BQ4FZB7 885 aa29.69■■■□□ 2.34
FANCA-221ENST00000566889 RNF20Q5VTR2 975 aa29.69■■■□□ 2.34
FANCA-221ENST00000566889 ERO1AQ96HE7 468 aa29.69■■■□□ 2.34
FANCA-221ENST00000566889 NAP1L2Q9ULW6 460 aaPredicted RBP29.69■■■□□ 2.34
FANCA-221ENST00000566889 CCDC83Q8IWF9 413 aa29.69■■■□□ 2.34
FANCA-221ENST00000566889 RASEFQ8IZ41 740 aa29.69■■■□□ 2.34
FANCA-221ENST00000566889 IPO4Q8TEX9 1081 aaKnown RBP29.69■■■□□ 2.34
FANCA-221ENST00000566889 CLIP2Q9UDT6 1046 aa29.69■■■□□ 2.34
FANCA-221ENST00000566889 NRKQ7Z2Y5 1582 aa29.68■■■□□ 2.34
FANCA-221ENST00000566889 TTC6Q86TZ1 520 aa29.68■■■□□ 2.34
FANCA-221ENST00000566889 CACTINQ8WUQ7 758 aaKnown RBP29.68■■■□□ 2.34
FANCA-221ENST00000566889 RBM6P78332 1123 aaKnown RBP29.68■■■□□ 2.34
FANCA-221ENST00000566889 G2E3Q7L622 706 aa29.68■■■□□ 2.34
FANCA-221ENST00000566889 COG3Q96JB2 828 aa29.68■■■□□ 2.34
FANCA-221ENST00000566889 DLC1Q96QB1 1528 aa29.68■■■□□ 2.34
FANCA-221ENST00000566889 VPS37CA5D8V6 355 aaPredicted RBP29.67■■■□□ 2.34
FANCA-221ENST00000566889 MCM10Q7L590 875 aa29.67■■■□□ 2.34
FANCA-221ENST00000566889 NME9Q86XW9 330 aa29.67■■■□□ 2.34
FANCA-221ENST00000566889 CRB1P82279 1406 aa29.67■■■□□ 2.34
FANCA-221ENST00000566889 RAB11FIP3O75154 756 aa29.66■■■□□ 2.34
FANCA-221ENST00000566889 LIG1P18858 919 aa29.66■■■□□ 2.34
FANCA-221ENST00000566889 CASTP20810 708 aaKnown RBP29.66■■■□□ 2.34
FANCA-221ENST00000566889 DNAJC2Q99543 621 aaKnown RBP29.66■■■□□ 2.34
FANCA-221ENST00000566889 TM6SF1Q9BZW5 370 aa29.66■■■□□ 2.34
FANCA-221ENST00000566889 LARGE1O95461 756 aa29.65■■■□□ 2.34
FANCA-221ENST00000566889 SCAND2PQ9GZW5 306 aaPredicted RBP29.65■■■□□ 2.34
FANCA-221ENST00000566889 TTC21AQ8NDW8 1320 aa29.65■■■□□ 2.34
FANCA-221ENST00000566889 CAMK4Q16566 473 aa29.65■■■□□ 2.34
FANCA-221ENST00000566889 CNTROBQ8N137 903 aa29.65■■■□□ 2.34
FANCA-221ENST00000566889 PTPN14Q15678 1187 aa29.64■■■□□ 2.34
FANCA-221ENST00000566889 NYAP1Q6ZVC0 841 aa29.64■■■□□ 2.34
FANCA-221ENST00000566889 CLSTN2Q9H4D0 955 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms