RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 ACSBG1Q96GR2 724 aa22.54■■□□□ 1.2
IFT140-206ENST00000565298 SETDB2Q96T68 719 aa22.54■■□□□ 1.2
IFT140-206ENST00000565298 EIF2AK4Q9P2K8 1649 aaKnown RBP22.54■■□□□ 1.2
IFT140-206ENST00000565298 IQCA1Q86XH1 822 aa22.53■■□□□ 1.2
IFT140-206ENST00000565298 FILIP1LQ4L180 1135 aa22.53■■□□□ 1.2
IFT140-206ENST00000565298 MPHOSPH10O00566 681 aaKnown RBP22.53■■□□□ 1.2
IFT140-206ENST00000565298 DCAF5Q96JK2 942 aa22.53■■□□□ 1.2
IFT140-206ENST00000565298 FAM13BQ9NYF5 915 aa22.53■■□□□ 1.2
IFT140-206ENST00000565298 ME1P48163 572 aa22.52■■□□□ 1.2
IFT140-206ENST00000565298 BMP2KQ9NSY1 1161 aaPredicted RBP22.52■■□□□ 1.2
IFT140-206ENST00000565298 ABCC1P33527 1531 aa22.52■■□□□ 1.2
IFT140-206ENST00000565298 ODF2Q5BJF6 829 aa22.52■■□□□ 1.2
IFT140-206ENST00000565298 IP6K1Q92551 441 aa22.52■■□□□ 1.2
IFT140-206ENST00000565298 SPTY2D1Q68D10 685 aaPredicted RBP22.52■■□□□ 1.2
IFT140-206ENST00000565298 ZNF444Q8N0Y2 327 aaPredicted RBP22.52■■□□□ 1.2
IFT140-206ENST00000565298 ZNF622Q969S3 477 aaKnown RBP eCLIP22.52■■□□□ 1.2
IFT140-206ENST00000565298 NLRP3Q96P20 1036 aa22.52■■□□□ 1.2
IFT140-206ENST00000565298 CEBPZQ03701 1054 aaKnown RBP22.52■■□□□ 1.19
IFT140-206ENST00000565298 XAGE3Q8WTP9 111 aa22.52■■□□□ 1.19
IFT140-206ENST00000565298 SMARCA5O60264 1052 aaPredicted RBP22.51■■□□□ 1.19
IFT140-206ENST00000565298 COPS6Q7L5N1 327 aa22.51■■□□□ 1.19
IFT140-206ENST00000565298 ZNF219Q9P2Y4 722 aaPredicted RBP22.51■■□□□ 1.19
IFT140-206ENST00000565298 MAGEC2Q9UBF1 373 aaPredicted RBP22.51■■□□□ 1.19
IFT140-206ENST00000565298 ALDH1L1O75891 902 aa22.51■■□□□ 1.19
IFT140-206ENST00000565298 TESK2Q96S53 571 aa22.51■■□□□ 1.19
IFT140-206ENST00000565298 HMGB1P09429 215 aaKnown RBP22.51■■□□□ 1.19
IFT140-206ENST00000565298 STIM1Q13586 685 aa22.51■■□□□ 1.19
IFT140-206ENST00000565298 CFAP45Q9UL16 551 aa22.5■■□□□ 1.19
IFT140-206ENST00000565298 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
IFT140-206ENST00000565298 BAG3O95817 575 aa22.5■■□□□ 1.19
IFT140-206ENST00000565298 ANXA1P04083 346 aa22.5■■□□□ 1.19
IFT140-206ENST00000565298 SLC39A6Q13433 755 aa22.5■■□□□ 1.19
IFT140-206ENST00000565298 CTCFLQ8NI51 663 aaPredicted RBP22.5■■□□□ 1.19
IFT140-206ENST00000565298 ZNF76P36508 570 aa22.5■■□□□ 1.19
IFT140-206ENST00000565298 UQCRFS1P1P0C7P4 283 aa22.49■■□□□ 1.19
IFT140-206ENST00000565298 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
IFT140-206ENST00000565298 PRPF40AO75400 957 aaKnown RBP22.49■■□□□ 1.19
IFT140-206ENST00000565298 CASTP20810 708 aaKnown RBP22.49■■□□□ 1.19
IFT140-206ENST00000565298 CHPF2Q9P2E5 772 aa22.49■■□□□ 1.19
IFT140-206ENST00000565298 SEC63Q9UGP8 760 aaKnown RBP22.49■■□□□ 1.19
IFT140-206ENST00000565298 ZFYVE9O95405 1425 aa22.49■■□□□ 1.19
IFT140-206ENST00000565298 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
IFT140-206ENST00000565298 NAP1L1P55209 391 aaKnown RBP22.48■■□□□ 1.19
IFT140-206ENST00000565298 EVI5LQ96CN4 794 aa22.48■■□□□ 1.19
IFT140-206ENST00000565298 ARHGEF12Q9NZN5 1544 aa22.48■■□□□ 1.19
IFT140-206ENST00000565298 ZNF213O14771 459 aa22.48■■□□□ 1.19
IFT140-206ENST00000565298 ANKRD18AQ8IVF6 992 aa22.48■■□□□ 1.19
IFT140-206ENST00000565298 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
IFT140-206ENST00000565298 KSR2Q6VAB6 950 aa22.47■■□□□ 1.19
IFT140-206ENST00000565298 NFKBIBQ15653 356 aa22.47■■□□□ 1.19
IFT140-206ENST00000565298 MAP3K19Q56UN5 1328 aa22.47■■□□□ 1.19
IFT140-206ENST00000565298 NBPF14Q5TI25 921 aa22.47■■□□□ 1.19
IFT140-206ENST00000565298 PRPF40BQ6NWY9 871 aaKnown RBP22.47■■□□□ 1.19
IFT140-206ENST00000565298 MTHFSDQ2M296 383 aaKnown RBP22.46■■□□□ 1.19
IFT140-206ENST00000565298 ZNF592Q92610 1267 aa22.46■■□□□ 1.19
IFT140-206ENST00000565298 EYA1Q99502 592 aa22.46■■□□□ 1.19
IFT140-206ENST00000565298 BTG4Q9NY30 223 aa22.46■■□□□ 1.19
IFT140-206ENST00000565298 DACH1Q9UI36 760 aa22.46■■□□□ 1.19
IFT140-206ENST00000565298 CIZ1Q9ULV3 898 aaPredicted RBP22.46■■□□□ 1.19
IFT140-206ENST00000565298 RTCBQ9Y3I0 505 aaKnown RBP22.46■■□□□ 1.19
IFT140-206ENST00000565298 PCDH11XQ9BZA7 1347 aa22.46■■□□□ 1.19
IFT140-206ENST00000565298 PCDH11YQ9BZA8 1340 aa22.46■■□□□ 1.19
IFT140-206ENST00000565298 ZHX3Q9H4I2 956 aa22.46■■□□□ 1.19
IFT140-206ENST00000565298 RANBP6O60518 1105 aaKnown RBP22.45■■□□□ 1.18
IFT140-206ENST00000565298 NFATC2IPQ8NCF5 419 aa22.45■■□□□ 1.18
IFT140-206ENST00000565298 NYXQ9GZU5 481 aa22.45■■□□□ 1.18
IFT140-206ENST00000565298 CAVIN1Q6NZI2 390 aaKnown RBP22.45■■□□□ 1.18
IFT140-206ENST00000565298 TRAK2O60296 914 aa22.45■■□□□ 1.18
IFT140-206ENST00000565298 HOXC9P31274 260 aa22.45■■□□□ 1.18
IFT140-206ENST00000565298 TPTE2Q6XPS3 522 aa22.45■■□□□ 1.18
IFT140-206ENST00000565298 NIP7Q9Y221 180 aaKnown RBP eCLIP22.45■■□□□ 1.18
IFT140-206ENST00000565298 A0A1W2PP64 1363 aa22.44■■□□□ 1.18
IFT140-206ENST00000565298 CFAP43Q8NDM7 1665 aa22.44■■□□□ 1.18
IFT140-206ENST00000565298 C20orf194Q5TEA3 1177 aa22.44■■□□□ 1.18
IFT140-206ENST00000565298 LINS1Q8NG48 757 aa22.44■■□□□ 1.18
IFT140-206ENST00000565298 SIRT1Q96EB6 747 aa22.44■■□□□ 1.18
IFT140-206ENST00000565298 KAT6BQ8WYB5 2073 aa22.44■■□□□ 1.18
IFT140-206ENST00000565298 GPS2Q13227 327 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 TTLL12Q14166 644 aaPredicted RBP22.43■■□□□ 1.18
IFT140-206ENST00000565298 PDILTQ8N807 584 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 TRIM5Q9C035 493 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 GRM8O00222 908 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 TMEM2Q9UHN6 1383 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 CEP131Q9UPN4 1083 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 GOLIM4O00461 696 aa22.43■■□□□ 1.18
IFT140-206ENST00000565298 MAP3K5Q99683 1374 aa22.42■■□□□ 1.18
IFT140-206ENST00000565298 ORAI2Q96SN7 254 aa22.42■■□□□ 1.18
IFT140-206ENST00000565298 SH2B1Q9NRF2 756 aaPredicted RBP22.42■■□□□ 1.18
IFT140-206ENST00000565298 TNIP1Q15025 636 aa22.42■■□□□ 1.18
IFT140-206ENST00000565298 DZIP3Q86Y13 1208 aaKnown RBP22.42■■□□□ 1.18
IFT140-206ENST00000565298 PLEKHH1Q9ULM0 1364 aa22.42■■□□□ 1.18
IFT140-206ENST00000565298 SSBP05455 408 aaKnown RBP eCLIP22.42■■□□□ 1.18
IFT140-206ENST00000565298 HLA-DOAP06340 250 aa22.42■■□□□ 1.18
IFT140-206ENST00000565298 SMARCE1Q969G3 411 aa22.42■■□□□ 1.18
IFT140-206ENST00000565298 TFCP2L1Q9NZI6 479 aa22.42■■□□□ 1.18
IFT140-206ENST00000565298 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
IFT140-206ENST00000565298 DNMT1P26358 1616 aaKnown RBP22.41■■□□□ 1.18
IFT140-206ENST00000565298 MYO1BO43795 1136 aa22.41■■□□□ 1.18
IFT140-206ENST00000565298 MRE11P49959 708 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms