RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 POTEIP0CG38 1075 aa22.1■■□□□ 1.13
RNF40-205ENST00000563909 POTEJP0CG39 1038 aa22.1■■□□□ 1.13
RNF40-205ENST00000563909 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
RNF40-205ENST00000563909 USPL1Q5W0Q7 1092 aa22.09■■□□□ 1.13
RNF40-205ENST00000563909 WBP1LQ9NX94 342 aa22.09■■□□□ 1.13
RNF40-205ENST00000563909 CCDC88AQ3V6T2 1871 aa22.09■■□□□ 1.13
RNF40-205ENST00000563909 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.13
RNF40-205ENST00000563909 MLLT1Q03111 559 aaPredicted RBP22.08■■□□□ 1.13
RNF40-205ENST00000563909 C2CD5Q86YS7 1000 aa22.08■■□□□ 1.13
RNF40-205ENST00000563909 KIF20BQ96Q89 1820 aa22.08■■□□□ 1.12
RNF40-205ENST00000563909 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
RNF40-205ENST00000563909 INTS5Q6P9B9 1019 aaKnown RBP22.07■■□□□ 1.12
RNF40-205ENST00000563909 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
RNF40-205ENST00000563909 NFIXQ14938 502 aa22.06■■□□□ 1.12
RNF40-205ENST00000563909 H0YIN7 160 aa22.05■■□□□ 1.12
RNF40-205ENST00000563909 PASKQ96RG2 1323 aa22.05■■□□□ 1.12
RNF40-205ENST00000563909 TMEM88BA6NKF7 163 aa22.03■■□□□ 1.12
RNF40-205ENST00000563909 DDNO94850 711 aaPredicted RBP22.03■■□□□ 1.12
RNF40-205ENST00000563909 SERPINB2P05120 415 aa22.03■■□□□ 1.12
RNF40-205ENST00000563909 HSPA8P11142 646 aaKnown RBP22.03■■□□□ 1.12
RNF40-205ENST00000563909 NFATC2IPQ8NCF5 419 aa22.03■■□□□ 1.12
RNF40-205ENST00000563909 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
RNF40-205ENST00000563909 CCDC85CA6NKD9 419 aa22.02■■□□□ 1.12
RNF40-205ENST00000563909 CARD14Q9BXL6 1004 aa22.02■■□□□ 1.12
RNF40-205ENST00000563909 MTHFSP49914 203 aa22.01■■□□□ 1.11
RNF40-205ENST00000563909 EIF4A2Q14240 407 aaKnown RBP22.01■■□□□ 1.11
RNF40-205ENST00000563909 PLEKHO1Q53GL0 409 aaPredicted RBP22.01■■□□□ 1.11
RNF40-205ENST00000563909 ZNF530Q6P9A1 599 aaPredicted RBP22.01■■□□□ 1.11
RNF40-205ENST00000563909 DLEC1Q9Y238 1755 aa22.01■■□□□ 1.11
RNF40-205ENST00000563909 AFDNP55196 1824 aaKnown RBP22.01■■□□□ 1.11
RNF40-205ENST00000563909 C21orf2O43822 256 aa22■■□□□ 1.11
RNF40-205ENST00000563909 LDHDQ86WU2 507 aa22■■□□□ 1.11
RNF40-205ENST00000563909 NARFQ9UHQ1 456 aa22■■□□□ 1.11
RNF40-205ENST00000563909 ADAMTS7Q9UKP4 1686 aa22■■□□□ 1.11
RNF40-205ENST00000563909 RGS19P49795 217 aa21.99■■□□□ 1.11
RNF40-205ENST00000563909 ZNF622Q969S3 477 aaKnown RBP eCLIP21.99■■□□□ 1.112e-10■□□□□ 10.1
RNF40-205ENST00000563909 POLKQ9UBT6 870 aa21.99■■□□□ 1.11
RNF40-205ENST00000563909 ANKRD26Q9UPS8 1709 aa21.99■■□□□ 1.11
RNF40-205ENST00000563909 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
RNF40-205ENST00000563909 TJP1Q07157 1748 aa21.98■■□□□ 1.11
RNF40-205ENST00000563909 ITGBL1O95965 494 aaPredicted RBP21.98■■□□□ 1.11
RNF40-205ENST00000563909 DNAJC10Q8IXB1 793 aa21.98■■□□□ 1.11
RNF40-205ENST00000563909 IQCA1LA6NCM1 817 aa21.97■■□□□ 1.11
RNF40-205ENST00000563909 CARMIL3Q8ND23 1372 aa21.97■■□□□ 1.11
RNF40-205ENST00000563909 NRXN2Q9P2S2 1712 aa21.97■■□□□ 1.11
RNF40-205ENST00000563909 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
RNF40-205ENST00000563909 MAP2K1Q02750 393 aaPredicted RBP21.96■■□□□ 1.11
RNF40-205ENST00000563909 DEFB115Q30KQ5 88 aa21.96■■□□□ 1.11
RNF40-205ENST00000563909 BCL2L12Q9HB09 334 aa21.96■■□□□ 1.11
RNF40-205ENST00000563909 AMOTQ4VCS5 1084 aa21.95■■□□□ 1.1
RNF40-205ENST00000563909 TAOK3Q9H2K8 898 aa21.95■■□□□ 1.1
RNF40-205ENST00000563909 TAF1DQ9H5J8 278 aaPredicted RBP21.95■■□□□ 1.1
RNF40-205ENST00000563909 DICER1Q9UPY3 1922 aaKnown RBP21.94■■□□□ 1.1
RNF40-205ENST00000563909 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
RNF40-205ENST00000563909 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
RNF40-205ENST00000563909 EAPPQ56P03 285 aaPredicted RBP21.93■■□□□ 1.1
RNF40-205ENST00000563909 BICDL1Q6ZP65 573 aa21.93■■□□□ 1.1
RNF40-205ENST00000563909 LTBP3Q9NS15 1303 aa21.93■■□□□ 1.1
RNF40-205ENST00000563909 CLEC11AQ9Y240 323 aa21.93■■□□□ 1.1
RNF40-205ENST00000563909 COL15A1P39059 1388 aa21.92■■□□□ 1.1
RNF40-205ENST00000563909 WDR33Q9C0J8 1336 aaKnown RBP21.92■■□□□ 1.1
RNF40-205ENST00000563909 CYP19A1P11511 503 aaPredicted RBP21.92■■□□□ 1.1
RNF40-205ENST00000563909 TNRC18O15417 2968 aaPredicted RBP21.92■■□□□ 1.1
RNF40-205ENST00000563909 PDE6BP35913 854 aa21.91■■□□□ 1.1
RNF40-205ENST00000563909 TNNT2P45379 298 aaPredicted RBP21.91■■□□□ 1.1
RNF40-205ENST00000563909 CDCA8Q53HL2 280 aa21.91■■□□□ 1.1
RNF40-205ENST00000563909 L3MBTL3Q96JM7 780 aaPredicted RBP21.91■■□□□ 1.1
RNF40-205ENST00000563909 FER1L6Q2WGJ9 1857 aa21.91■■□□□ 1.1
RNF40-205ENST00000563909 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
RNF40-205ENST00000563909 CCDC24Q8N4L8 307 aa21.89■■□□□ 1.09
RNF40-205ENST00000563909 CFAP44Q96MT7 982 aa21.89■■□□□ 1.09
RNF40-205ENST00000563909 BRIP1Q9BX63 1249 aa21.89■■□□□ 1.09
RNF40-205ENST00000563909 ABT1Q9ULW3 272 aaKnown RBP21.89■■□□□ 1.09
RNF40-205ENST00000563909 TIMELESSQ9UNS1 1208 aa21.89■■□□□ 1.09
RNF40-205ENST00000563909 ZBTB1Q9Y2K1 713 aa21.89■■□□□ 1.09
RNF40-205ENST00000563909 CNTROBQ8N137 903 aa21.87■■□□□ 1.09
RNF40-205ENST00000563909 BEGAINQ9BUH8 593 aa21.87■■□□□ 1.09
RNF40-205ENST00000563909 SCN4AP35499 1836 aa21.87■■□□□ 1.09
RNF40-205ENST00000563909 MAP1SQ66K74 1059 aaPredicted RBP21.86■■□□□ 1.09
RNF40-205ENST00000563909 HACL1Q9UJ83 578 aa21.86■■□□□ 1.09
RNF40-205ENST00000563909 CANXP27824 592 aaKnown RBP21.85■■□□□ 1.09
RNF40-205ENST00000563909 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
RNF40-205ENST00000563909 EPHX2P34913 555 aa21.84■■□□□ 1.09
RNF40-205ENST00000563909 TBC1D9BQ66K14 1250 aa21.84■■□□□ 1.09
RNF40-205ENST00000563909 PRR5LQ6MZQ0 368 aa21.84■■□□□ 1.09
RNF40-205ENST00000563909 PRPF40BQ6NWY9 871 aaKnown RBP21.84■■□□□ 1.09
RNF40-205ENST00000563909 CNKSR1Q969H4 720 aa21.84■■□□□ 1.09
RNF40-205ENST00000563909 ANKRD31Q8N7Z5 1873 aa21.83■■□□□ 1.09
RNF40-205ENST00000563909 SLC39A6Q13433 755 aa21.83■■□□□ 1.09
RNF40-205ENST00000563909 SOGA3Q5TF21 947 aa21.83■■□□□ 1.09
RNF40-205ENST00000563909 PNMA8AQ86V59 439 aaPredicted RBP21.83■■□□□ 1.09
RNF40-205ENST00000563909 PAXIP1Q6ZW49 1069 aaPredicted RBP21.82■■□□□ 1.08
RNF40-205ENST00000563909 SLC52A2Q9HAB3 445 aa21.82■■□□□ 1.08
RNF40-205ENST00000563909 ZNF541Q9H0D2 1346 aa21.81■■□□□ 1.08
RNF40-205ENST00000563909 COL11A2P13942 1736 aaPredicted RBP21.81■■□□□ 1.08
RNF40-205ENST00000563909 GRM1Q13255 1194 aa21.81■■□□□ 1.08
RNF40-205ENST00000563909 STYK1Q6J9G0 422 aa21.81■■□□□ 1.08
RNF40-205ENST00000563909 CAPNS2Q96L46 248 aa21.81■■□□□ 1.08
RNF40-205ENST00000563909 TSKSQ9UJT2 592 aa21.81■■□□□ 1.08
RNF40-205ENST00000563909 GPR101Q96P66 508 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms