RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-210ENST00000561817 EXOSC9Q06265 439 aaKnown RBP8.47□□□□□ -1.05
CAPN3-210ENST00000561817 PPP1R15BQ5SWA1 713 aa8.47□□□□□ -1.05
CAPN3-210ENST00000561817 CRBNQ96SW2 442 aa8.47□□□□□ -1.05
CAPN3-210ENST00000561817 THUMPD2Q9BTF0 503 aaKnown RBP8.47□□□□□ -1.05
CAPN3-210ENST00000561817 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
CAPN3-210ENST00000561817 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
CAPN3-210ENST00000561817 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-210ENST00000561817 SPATA31A3Q5VYP0 1347 aa8.47□□□□□ -1.05
CAPN3-210ENST00000561817 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
CAPN3-210ENST00000561817 ABCC6O95255 1503 aa8.46□□□□□ -1.05
CAPN3-210ENST00000561817 FAM83GA6ND36 823 aa8.46□□□□□ -1.06
CAPN3-210ENST00000561817 MTHFSDQ2M296 383 aaKnown RBP8.46□□□□□ -1.06
CAPN3-210ENST00000561817 B4GALNT3Q6L9W6 998 aa8.46□□□□□ -1.06
CAPN3-210ENST00000561817 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
CAPN3-210ENST00000561817 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.06
CAPN3-210ENST00000561817 COL22A1Q8NFW1 1626 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-210ENST00000561817 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-210ENST00000561817 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-210ENST00000561817 TK2O00142 265 aa8.45□□□□□ -1.06
CAPN3-210ENST00000561817 NEFMP07197 916 aa8.45□□□□□ -1.06
CAPN3-210ENST00000561817 LMOD3Q0VAK6 560 aa8.45□□□□□ -1.06
CAPN3-210ENST00000561817 NBPF6Q5VWK0 638 aa8.45□□□□□ -1.06
CAPN3-210ENST00000561817 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-210ENST00000561817 NBPF4Q96M43 638 aa8.45□□□□□ -1.06
CAPN3-210ENST00000561817 RGPD5Q99666 1765 aa8.45□□□□□ -1.06
CAPN3-210ENST00000561817 PLCH1Q4KWH8 1693 aa8.44□□□□□ -1.06
CAPN3-210ENST00000561817 CHL1O00533 1208 aa8.44□□□□□ -1.06
CAPN3-210ENST00000561817 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-210ENST00000561817 GNAI1P63096 354 aa8.44□□□□□ -1.06
CAPN3-210ENST00000561817 CALD1Q05682 793 aaKnown RBP8.44□□□□□ -1.06
CAPN3-210ENST00000561817 DCTN1Q14203 1278 aa8.44□□□□□ -1.06
CAPN3-210ENST00000561817 PDE3AQ14432 1141 aa8.44□□□□□ -1.06
CAPN3-210ENST00000561817 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-210ENST00000561817 MBIPQ9NS73 344 aa8.44□□□□□ -1.06
CAPN3-210ENST00000561817 CPDO75976 1380 aa8.44□□□□□ -1.06
CAPN3-210ENST00000561817 FAM208AQ9UK61 1670 aaKnown RBP8.43□□□□□ -1.06
CAPN3-210ENST00000561817 HTATSF1O43719 755 aaKnown RBP8.43□□□□□ -1.06
CAPN3-210ENST00000561817 VAMP4O75379 141 aa8.43□□□□□ -1.06
CAPN3-210ENST00000561817 PSEN2P49810 448 aa8.43□□□□□ -1.06
CAPN3-210ENST00000561817 MEX3CQ5U5Q3 659 aaKnown RBP8.43□□□□□ -1.06
CAPN3-210ENST00000561817 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
CAPN3-210ENST00000561817 SSH1Q8WYL5 1049 aa8.43□□□□□ -1.06
CAPN3-210ENST00000561817 LTV1Q96GA3 475 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-210ENST00000561817 TNNQ9UQP3 1299 aa8.43□□□□□ -1.06
CAPN3-210ENST00000561817 JCADQ9P266 1359 aa8.43□□□□□ -1.06
CAPN3-210ENST00000561817 RLBP1P12271 317 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 ALDH1L2Q3SY69 923 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 MCM10Q7L590 875 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 USHBP1Q8N6Y0 703 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 TSPYL6Q8N831 410 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 LRRC59Q96AG4 307 aaKnown RBP8.42□□□□□ -1.06
CAPN3-210ENST00000561817 ZNF428Q96B54 188 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 LRP6O75581 1613 aa8.42□□□□□ -1.06
CAPN3-210ENST00000561817 ADAMTS7Q9UKP4 1686 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 CEMIPQ8WUJ3 1361 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 KIAA0232Q92628 1395 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 KDM2BQ8NHM5 1336 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 ZBTB7CA1YPR0 619 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 DMRTA1Q5VZB9 504 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 C8orf58Q8NAV2 365 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 CABLES1Q8TDN4 633 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 PANK1Q8TE04 598 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 CCDC136Q96JN2 1154 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 LARP6Q9BRS8 491 aaKnown RBP8.41□□□□□ -1.06
CAPN3-210ENST00000561817 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
CAPN3-210ENST00000561817 MAP3K5Q99683 1374 aa8.4□□□□□ -1.06
CAPN3-210ENST00000561817 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
CAPN3-210ENST00000561817 MRPL50Q8N5N7 158 aaKnown RBP8.4□□□□□ -1.06
CAPN3-210ENST00000561817 ZNF454Q8N9F8 522 aa8.4□□□□□ -1.06
CAPN3-210ENST00000561817 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.06
CAPN3-210ENST00000561817 KCNK17Q96T54 332 aa8.4□□□□□ -1.06
CAPN3-210ENST00000561817 PLEKHG2Q9H7P9 1386 aa8.39□□□□□ -1.07
CAPN3-210ENST00000561817 GNAT3A8MTJ3 354 aa8.39□□□□□ -1.07
CAPN3-210ENST00000561817 ADAMTS2O95450 1211 aa8.39□□□□□ -1.07
CAPN3-210ENST00000561817 SMC4Q9NTJ3 1288 aa8.39□□□□□ -1.07
CAPN3-210ENST00000561817 HCSTQ9UBK5 93 aa8.39□□□□□ -1.07
CAPN3-210ENST00000561817 LAS1LQ9Y4W2 734 aaKnown RBP8.39□□□□□ -1.07
CAPN3-210ENST00000561817 OVOS2A0A0G2JMS6 1433 aa8.38□□□□□ -1.07
CAPN3-210ENST00000561817 HRO43593 1189 aa8.38□□□□□ -1.07
CAPN3-210ENST00000561817 TRIM27P14373 513 aa8.38□□□□□ -1.07
CAPN3-210ENST00000561817 KRT24Q2M2I5 525 aa8.38□□□□□ -1.07
CAPN3-210ENST00000561817 TWISTNBQ3B726 338 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-210ENST00000561817 ZKSCAN2Q63HK3 967 aa8.38□□□□□ -1.07
CAPN3-210ENST00000561817 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
CAPN3-210ENST00000561817 NOB1Q9ULX3 412 aaKnown RBP8.38□□□□□ -1.07
CAPN3-210ENST00000561817 KDM3BQ7LBC6 1761 aa8.38□□□□□ -1.07
CAPN3-210ENST00000561817 FOSBP53539 338 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 MFSD10Q14728 455 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 CHRNA2Q15822 529 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 ATF7IPQ6VMQ6 1270 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 ARHGAP45Q92619 1136 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 FRAT1Q92837 279 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-210ENST00000561817 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 BCL2L12Q9HB09 334 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 COG6Q9Y2V7 657 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 MEGF6O75095 1541 aa8.37□□□□□ -1.07
CAPN3-210ENST00000561817 SIPA1L3O60292 1781 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms