RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
LRRC28-220ENST00000561253 KCTD17Q8N5Z5 321 aa9.42□□□□□ -0.9
LRRC28-220ENST00000561253 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
LRRC28-220ENST00000561253 HPS1Q92902 700 aa9.42□□□□□ -0.9
LRRC28-220ENST00000561253 KLF16Q9BXK1 252 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-220ENST00000561253 CDK13Q14004 1512 aaKnown RBP9.41□□□□□ -0.9
LRRC28-220ENST00000561253 WDR7Q9Y4E6 1490 aa9.41□□□□□ -0.9
LRRC28-220ENST00000561253 TMEM229AB2RXF0 380 aa9.41□□□□□ -0.9
LRRC28-220ENST00000561253 Q6ZVU0 165 aa9.41□□□□□ -0.9
LRRC28-220ENST00000561253 HINFPQ9BQA5 517 aa9.41□□□□□ -0.9
LRRC28-220ENST00000561253 HECW1Q76N89 1606 aa9.41□□□□□ -0.9
LRRC28-220ENST00000561253 LRRIQ1Q96JM4 1722 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 BACH1O14867 736 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
LRRC28-220ENST00000561253 SCNN1DP51172 638 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 B4GALNT3Q6L9W6 998 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 ETNK1Q9HBU6 452 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 ARHGEF10LQ9HCE6 1279 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 RAB6BQ9NRW1 208 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 ZNF358Q9NW07 568 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 DIP2BQ9P265 1576 aa9.4□□□□□ -0.9
LRRC28-220ENST00000561253 FAM187AA6NFU0 413 aa9.39□□□□□ -0.91
LRRC28-220ENST00000561253 M0R2N6 131 aa9.39□□□□□ -0.91
LRRC28-220ENST00000561253 WASLO00401 505 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-220ENST00000561253 BRD1O95696 1058 aa9.39□□□□□ -0.91
LRRC28-220ENST00000561253 INHAP05111 366 aa9.39□□□□□ -0.91
LRRC28-220ENST00000561253 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
LRRC28-220ENST00000561253 TSEN2Q8NCE0 465 aaKnown RBP9.39□□□□□ -0.91
LRRC28-220ENST00000561253 CLP1Q92989 425 aaKnown RBP9.39□□□□□ -0.91
LRRC28-220ENST00000561253 MAGI3Q5TCQ9 1506 aa9.39□□□□□ -0.91
LRRC28-220ENST00000561253 GLI2P10070 1586 aa9.38□□□□□ -0.91
LRRC28-220ENST00000561253 ZBTB7CA1YPR0 619 aa9.38□□□□□ -0.91
LRRC28-220ENST00000561253 AGBL1Q96MI9 1066 aa9.38□□□□□ -0.91
LRRC28-220ENST00000561253 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
LRRC28-220ENST00000561253 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
LRRC28-220ENST00000561253 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-220ENST00000561253 PTGIRP43119 386 aa9.37□□□□□ -0.91
LRRC28-220ENST00000561253 RELBQ01201 579 aa9.37□□□□□ -0.91
LRRC28-220ENST00000561253 A0A1W2PRU2 124 aa9.36□□□□□ -0.91
LRRC28-220ENST00000561253 PRMT3O60678 531 aa9.36□□□□□ -0.91
LRRC28-220ENST00000561253 LGR5O75473 907 aa9.36□□□□□ -0.91
LRRC28-220ENST00000561253 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
LRRC28-220ENST00000561253 MEIOBQ8N635 442 aa9.36□□□□□ -0.91
LRRC28-220ENST00000561253 CNKSR1Q969H4 720 aa9.36□□□□□ -0.91
LRRC28-220ENST00000561253 TROQ12816 1431 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-220ENST00000561253 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
LRRC28-220ENST00000561253 KIF13AQ9H1H9 1805 aa9.35□□□□□ -0.91
LRRC28-220ENST00000561253 PATL2C9JE40 543 aaKnown RBP9.35□□□□□ -0.91
LRRC28-220ENST00000561253 MEN1O00255 615 aa9.35□□□□□ -0.91
LRRC28-220ENST00000561253 GFRA3O60609 400 aa9.35□□□□□ -0.91
LRRC28-220ENST00000561253 TRIM26Q12899 539 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-220ENST00000561253 KDF1Q8NAX2 398 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-220ENST00000561253 XAGE2Q96GT9 111 aa9.35□□□□□ -0.91
LRRC28-220ENST00000561253 PRIMPOLQ96LW4 560 aa9.35□□□□□ -0.91
LRRC28-220ENST00000561253 NLRP3Q96P20 1036 aa9.35□□□□□ -0.91
LRRC28-220ENST00000561253 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
LRRC28-220ENST00000561253 ZNF395Q9H8N7 513 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-220ENST00000561253 UPP2O95045 317 aa9.34□□□□□ -0.91
LRRC28-220ENST00000561253 IL2RAP01589 272 aa9.34□□□□□ -0.91
LRRC28-220ENST00000561253 KCNA1Q09470 495 aa9.34□□□□□ -0.91
LRRC28-220ENST00000561253 CLN3Q13286 438 aa9.34□□□□□ -0.91
LRRC28-220ENST00000561253 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
LRRC28-220ENST00000561253 SLC4A9Q96Q91 983 aa9.34□□□□□ -0.91
LRRC28-220ENST00000561253 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
LRRC28-220ENST00000561253 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
LRRC28-220ENST00000561253 SSFA2P28290 1259 aa9.33□□□□□ -0.92
LRRC28-220ENST00000561253 SMTNP53814 917 aa9.33□□□□□ -0.92
LRRC28-220ENST00000561253 TLR1Q15399 786 aa9.33□□□□□ -0.92
LRRC28-220ENST00000561253 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
LRRC28-220ENST00000561253 ABCA9Q8IUA7 1624 aa9.33□□□□□ -0.92
LRRC28-220ENST00000561253 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
LRRC28-220ENST00000561253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.32□□□□□ -0.92
LRRC28-220ENST00000561253 MAP3K4Q9Y6R4 1608 aa9.32□□□□□ -0.92
LRRC28-220ENST00000561253 PLEKHD1A6NEE1 506 aa9.32□□□□□ -0.92
LRRC28-220ENST00000561253 A6NJY4 79 aa9.32□□□□□ -0.92
LRRC28-220ENST00000561253 NRG2O14511 850 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-220ENST00000561253 PPRC1Q5VV67 1664 aaKnown RBP9.32□□□□□ -0.92
LRRC28-220ENST00000561253 DGAT1O75907 488 aa9.31□□□□□ -0.92
LRRC28-220ENST00000561253 AVPP01185 164 aa9.31□□□□□ -0.92
LRRC28-220ENST00000561253 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
LRRC28-220ENST00000561253 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-220ENST00000561253 CFAP43Q8NDM7 1665 aa9.31□□□□□ -0.92
LRRC28-220ENST00000561253 KIF14Q15058 1648 aa9.31□□□□□ -0.92
LRRC28-220ENST00000561253 TTC37Q6PGP7 1564 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 LRRC9Q6ZRR7 1453 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 WEE1P30291 646 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 EPHA4P54764 986 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 CENPCQ03188 943 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 MTFR1Q15390 333 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 OCLNQ16625 522 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 SCG3Q8WXD2 468 aaKnown RBP9.3□□□□□ -0.92
LRRC28-220ENST00000561253 TSPAN10Q9H1Z9 355 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-220ENST00000561253 SCHIP1Q9P0W5 487 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-220ENST00000561253 CDK11AQ9UQ88 783 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-220ENST00000561253 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
LRRC28-220ENST00000561253 BMP2P12643 396 aa9.29□□□□□ -0.92
LRRC28-220ENST00000561253 IGFBP4P22692 258 aa9.29□□□□□ -0.92
LRRC28-220ENST00000561253 GTF2E1P29083 439 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-220ENST00000561253 LAPTM4AQ15012 233 aa9.29□□□□□ -0.92
LRRC28-220ENST00000561253 PHLDB3Q6NSJ2 640 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms