RNA–Protein interactions for RNA: ENST00000557595.1

AC243965.1-201, humanhuman

TSL 3 BASIC

Gene AC243965.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243965.1-201ENST00000557595 POTECB2RU33 542 aa23.36■■□□□ 1.33
AC243965.1-201ENST00000557595 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
AC243965.1-201ENST00000557595 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
AC243965.1-201ENST00000557595 AIDAQ96BJ3 306 aa23.36■■□□□ 1.33
AC243965.1-201ENST00000557595 NRXN2Q9P2S2 1712 aa23.36■■□□□ 1.33
AC243965.1-201ENST00000557595 EIF4A2Q14240 407 aaKnown RBP23.35■■□□□ 1.33
AC243965.1-201ENST00000557595 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
AC243965.1-201ENST00000557595 USPL1Q5W0Q7 1092 aa23.35■■□□□ 1.33
AC243965.1-201ENST00000557595 NFKBIEO00221 500 aa23.34■■□□□ 1.33
AC243965.1-201ENST00000557595 CHADLQ6NUI6 762 aa23.34■■□□□ 1.33
AC243965.1-201ENST00000557595 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
AC243965.1-201ENST00000557595 CNTNAP1P78357 1384 aa23.33■■□□□ 1.33
AC243965.1-201ENST00000557595 CTCFP49711 727 aaPredicted RBP23.33■■□□□ 1.33
AC243965.1-201ENST00000557595 INTS5Q6P9B9 1019 aaKnown RBP23.33■■□□□ 1.33
AC243965.1-201ENST00000557595 MTHFSP49914 203 aa23.32■■□□□ 1.32
AC243965.1-201ENST00000557595 C2CD5Q86YS7 1000 aa23.32■■□□□ 1.32
AC243965.1-201ENST00000557595 NFIXQ14938 502 aa23.31■■□□□ 1.32
AC243965.1-201ENST00000557595 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
AC243965.1-201ENST00000557595 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
AC243965.1-201ENST00000557595 C1orf141Q5JVX7 400 aa23.3■■□□□ 1.32
AC243965.1-201ENST00000557595 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
AC243965.1-201ENST00000557595 FER1L6Q2WGJ9 1857 aa23.3■■□□□ 1.32
AC243965.1-201ENST00000557595 SOS1Q07889 1333 aaPredicted RBP23.3■■□□□ 1.32
AC243965.1-201ENST00000557595 H0YIN7 160 aa23.29■■□□□ 1.32
AC243965.1-201ENST00000557595 ERFEQ4G0M1 354 aa23.29■■□□□ 1.32
AC243965.1-201ENST00000557595 SERPINB2P05120 415 aa23.28■■□□□ 1.32
AC243965.1-201ENST00000557595 FAM161AQ3B820 660 aa23.28■■□□□ 1.32
AC243965.1-201ENST00000557595 VIRMAQ69YN4 1812 aaKnown RBP23.28■■□□□ 1.32
AC243965.1-201ENST00000557595 SCN11AQ9UI33 1791 aa23.27■■□□□ 1.32
AC243965.1-201ENST00000557595 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
AC243965.1-201ENST00000557595 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
AC243965.1-201ENST00000557595 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
AC243965.1-201ENST00000557595 DNAJC10Q8IXB1 793 aa23.26■■□□□ 1.31
AC243965.1-201ENST00000557595 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
AC243965.1-201ENST00000557595 COL15A1P39059 1388 aa23.26■■□□□ 1.31
AC243965.1-201ENST00000557595 CARMIL3Q8ND23 1372 aa23.26■■□□□ 1.31
AC243965.1-201ENST00000557595 LBX1P52954 281 aa23.25■■□□□ 1.31
AC243965.1-201ENST00000557595 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
AC243965.1-201ENST00000557595 ZNF219Q9P2Y4 722 aaPredicted RBP23.24■■□□□ 1.31
AC243965.1-201ENST00000557595 CACNA1SQ13698 1873 aa23.24■■□□□ 1.31
AC243965.1-201ENST00000557595 VEGFBP49765 207 aa23.23■■□□□ 1.31
AC243965.1-201ENST00000557595 ZNF622Q969S3 477 aaKnown RBP eCLIP23.23■■□□□ 1.31
AC243965.1-201ENST00000557595 ABHD8Q96I13 439 aa23.23■■□□□ 1.31
AC243965.1-201ENST00000557595 SCN4AP35499 1836 aa23.22■■□□□ 1.31
AC243965.1-201ENST00000557595 C21orf2O43822 256 aa23.22■■□□□ 1.31
AC243965.1-201ENST00000557595 DDNO94850 711 aaPredicted RBP23.22■■□□□ 1.31
AC243965.1-201ENST00000557595 PASKQ96RG2 1323 aa23.22■■□□□ 1.31
AC243965.1-201ENST00000557595 LDHDQ86WU2 507 aa23.21■■□□□ 1.31
AC243965.1-201ENST00000557595 WBP1LQ9NX94 342 aa23.21■■□□□ 1.31
AC243965.1-201ENST00000557595 COL11A2P13942 1736 aaPredicted RBP23.21■■□□□ 1.31
AC243965.1-201ENST00000557595 TMEM88BA6NKF7 163 aa23.2■■□□□ 1.3
AC243965.1-201ENST00000557595 CYP19A1P11511 503 aaPredicted RBP23.2■■□□□ 1.3
AC243965.1-201ENST00000557595 TAOK3Q9H2K8 898 aa23.2■■□□□ 1.3
AC243965.1-201ENST00000557595 BCL2L12Q9HB09 334 aa23.2■■□□□ 1.3
AC243965.1-201ENST00000557595 PCDH10Q9P2E7 1040 aa23.2■■□□□ 1.3
AC243965.1-201ENST00000557595 IQCA1LA6NCM1 817 aa23.19■■□□□ 1.3
AC243965.1-201ENST00000557595 BICDL1Q6ZP65 573 aa23.19■■□□□ 1.3
AC243965.1-201ENST00000557595 ZBTB1Q9Y2K1 713 aa23.19■■□□□ 1.3
AC243965.1-201ENST00000557595 AEBP1Q8IUX7 1158 aa23.18■■□□□ 1.3
AC243965.1-201ENST00000557595 PDZRN3Q9UPQ7 1066 aa23.18■■□□□ 1.3
AC243965.1-201ENST00000557595 LTBP3Q9NS15 1303 aa23.17■■□□□ 1.3
AC243965.1-201ENST00000557595 HSPA8P11142 646 aaKnown RBP23.17■■□□□ 1.3
AC243965.1-201ENST00000557595 PDE6BP35913 854 aa23.16■■□□□ 1.3
AC243965.1-201ENST00000557595 SLX4Q8IY92 1834 aa23.16■■□□□ 1.3
AC243965.1-201ENST00000557595 MLLT1Q03111 559 aaPredicted RBP23.15■■□□□ 1.3
AC243965.1-201ENST00000557595 BRIP1Q9BX63 1249 aa23.14■■□□□ 1.29
AC243965.1-201ENST00000557595 TAF1DQ9H5J8 278 aaPredicted RBP23.14■■□□□ 1.29
AC243965.1-201ENST00000557595 SLC52A2Q9HAB3 445 aa23.14■■□□□ 1.29
AC243965.1-201ENST00000557595 EAPPQ56P03 285 aaPredicted RBP23.13■■□□□ 1.29
AC243965.1-201ENST00000557595 ARFGEF2Q9Y6D5 1785 aa23.13■■□□□ 1.29
AC243965.1-201ENST00000557595 CCDC85CA6NKD9 419 aa23.12■■□□□ 1.29
AC243965.1-201ENST00000557595 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
AC243965.1-201ENST00000557595 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
AC243965.1-201ENST00000557595 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
AC243965.1-201ENST00000557595 L3MBTL3Q96JM7 780 aaPredicted RBP23.12■■□□□ 1.29
AC243965.1-201ENST00000557595 ITGBL1O95965 494 aaPredicted RBP23.11■■□□□ 1.29
AC243965.1-201ENST00000557595 MAP2K1Q02750 393 aaPredicted RBP23.11■■□□□ 1.29
AC243965.1-201ENST00000557595 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
AC243965.1-201ENST00000557595 CCDC24Q8N4L8 307 aa23.11■■□□□ 1.29
AC243965.1-201ENST00000557595 CLEC11AQ9Y240 323 aa23.11■■□□□ 1.29
AC243965.1-201ENST00000557595 SCN7AQ01118 1682 aa23.11■■□□□ 1.29
AC243965.1-201ENST00000557595 MRC1P22897 1456 aa23.11■■□□□ 1.29
AC243965.1-201ENST00000557595 RASSF10A6NK89 507 aa23.1■■□□□ 1.29
AC243965.1-201ENST00000557595 DEFB115Q30KQ5 88 aa23.1■■□□□ 1.29
AC243965.1-201ENST00000557595 AKAP4Q5JQC9 854 aa23.1■■□□□ 1.29
AC243965.1-201ENST00000557595 TBC1D9BQ66K14 1250 aa23.1■■□□□ 1.29
AC243965.1-201ENST00000557595 CNKSR1Q969H4 720 aa23.1■■□□□ 1.29
AC243965.1-201ENST00000557595 A0A087WZG4 1122 aa23.09■■□□□ 1.29
AC243965.1-201ENST00000557595 NPHP1O15259 732 aa23.09■■□□□ 1.29
AC243965.1-201ENST00000557595 PRR5LQ6MZQ0 368 aa23.09■■□□□ 1.29
AC243965.1-201ENST00000557595 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
AC243965.1-201ENST00000557595 POLR3GLQ9BT43 218 aa23.08■■□□□ 1.29
AC243965.1-201ENST00000557595 ADAMTSL1Q8N6G6 1762 aa23.08■■□□□ 1.29
AC243965.1-201ENST00000557595 WDR33Q9C0J8 1336 aaKnown RBP23.08■■□□□ 1.28
AC243965.1-201ENST00000557595 UBR2Q8IWV8 1755 aa23.07■■□□□ 1.28
AC243965.1-201ENST00000557595 VSIG10Q8N0Z9 540 aa23.07■■□□□ 1.28
AC243965.1-201ENST00000557595 LGR6Q9HBX8 967 aa23.07■■□□□ 1.28
AC243965.1-201ENST00000557595 HACL1Q9UJ83 578 aa23.07■■□□□ 1.28
AC243965.1-201ENST00000557595 ABT1Q9ULW3 272 aaKnown RBP23.07■■□□□ 1.28
AC243965.1-201ENST00000557595 STYK1Q6J9G0 422 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms