RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 ZPR1O75312 459 aa11.15□□□□□ -0.62
PCNX1-215ENST00000557428 LMNB1P20700 586 aa11.15□□□□□ -0.62
PCNX1-215ENST00000557428 EIF4A2Q14240 407 aaKnown RBP11.15□□□□□ -0.62
PCNX1-215ENST00000557428 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
PCNX1-215ENST00000557428 CARD14Q9BXL6 1004 aa11.15□□□□□ -0.62
PCNX1-215ENST00000557428 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
PCNX1-215ENST00000557428 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
PCNX1-215ENST00000557428 PLEKHO1Q53GL0 409 aaPredicted RBP11.14□□□□□ -0.63
PCNX1-215ENST00000557428 C1orf141Q5JVX7 400 aa11.14□□□□□ -0.63
PCNX1-215ENST00000557428 USPL1Q5W0Q7 1092 aa11.14□□□□□ -0.63
PCNX1-215ENST00000557428 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
PCNX1-215ENST00000557428 MTHFSP49914 203 aa11.13□□□□□ -0.63
PCNX1-215ENST00000557428 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
PCNX1-215ENST00000557428 ADAMTS7Q9UKP4 1686 aa11.13□□□□□ -0.63
PCNX1-215ENST00000557428 VIRMAQ69YN4 1812 aaKnown RBP11.12□□□□□ -0.63
PCNX1-215ENST00000557428 DICER1Q9UPY3 1922 aaKnown RBP11.12□□□□□ -0.63
PCNX1-215ENST00000557428 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
PCNX1-215ENST00000557428 C2CD5Q86YS7 1000 aa11.12□□□□□ -0.63
PCNX1-215ENST00000557428 SCN11AQ9UI33 1791 aa11.12□□□□□ -0.63
PCNX1-215ENST00000557428 FOXN1O15353 648 aa11.11□□□□□ -0.63
PCNX1-215ENST00000557428 TTLL6Q8N841 843 aa11.11□□□□□ -0.63
PCNX1-215ENST00000557428 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
PCNX1-215ENST00000557428 AIDAQ96BJ3 306 aa11.11□□□□□ -0.63
PCNX1-215ENST00000557428 NRXN2Q9P2S2 1712 aa11.11□□□□□ -0.63
PCNX1-215ENST00000557428 TM4SF1P30408 202 aa11.1□□□□□ -0.63
PCNX1-215ENST00000557428 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
PCNX1-215ENST00000557428 BICDL1Q6ZP65 573 aa11.1□□□□□ -0.63
PCNX1-215ENST00000557428 DNAJC10Q8IXB1 793 aa11.1□□□□□ -0.63
PCNX1-215ENST00000557428 ZNF622Q969S3 477 aaKnown RBP eCLIP11.1□□□□□ -0.63
PCNX1-215ENST00000557428 COL15A1P39059 1388 aa11.1□□□□□ -0.63
PCNX1-215ENST00000557428 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
PCNX1-215ENST00000557428 CARMIL3Q8ND23 1372 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 H0YIN7 160 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 NFKBIEO00221 500 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 SERPINB2P05120 415 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 NFIXQ14938 502 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 AMOTQ4VCS5 1084 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 INTS5Q6P9B9 1019 aaKnown RBP11.09□□□□□ -0.63
PCNX1-215ENST00000557428 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
PCNX1-215ENST00000557428 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
PCNX1-215ENST00000557428 ANKRD31Q8N7Z5 1873 aa11.08□□□□□ -0.64
PCNX1-215ENST00000557428 AEBP1Q8IUX7 1158 aa11.08□□□□□ -0.64
PCNX1-215ENST00000557428 FER1L6Q2WGJ9 1857 aa11.08□□□□□ -0.64
PCNX1-215ENST00000557428 POTECB2RU33 542 aa11.07□□□□□ -0.64
PCNX1-215ENST00000557428 NPHP1O15259 732 aa11.07□□□□□ -0.64
PCNX1-215ENST00000557428 C21orf2O43822 256 aa11.07□□□□□ -0.64
PCNX1-215ENST00000557428 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
PCNX1-215ENST00000557428 POTEJP0CG39 1038 aa11.07□□□□□ -0.64
PCNX1-215ENST00000557428 CNTNAP1P78357 1384 aa11.06□□□□□ -0.64
PCNX1-215ENST00000557428 CTCFP49711 727 aaPredicted RBP11.06□□□□□ -0.64
PCNX1-215ENST00000557428 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
PCNX1-215ENST00000557428 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
PCNX1-215ENST00000557428 NARFQ9UHQ1 456 aa11.06□□□□□ -0.64
PCNX1-215ENST00000557428 ZBTB1Q9Y2K1 713 aa11.06□□□□□ -0.64
PCNX1-215ENST00000557428 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
PCNX1-215ENST00000557428 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
PCNX1-215ENST00000557428 SLC34A2O95436 690 aa11.05□□□□□ -0.64
PCNX1-215ENST00000557428 CANXP27824 592 aaKnown RBP11.05□□□□□ -0.64
PCNX1-215ENST00000557428 LBX1P52954 281 aa11.05□□□□□ -0.64
PCNX1-215ENST00000557428 FAM161AQ3B820 660 aa11.05□□□□□ -0.64
PCNX1-215ENST00000557428 EAPPQ56P03 285 aaPredicted RBP11.05□□□□□ -0.64
PCNX1-215ENST00000557428 SULT6B1Q6IMI4 303 aa11.05□□□□□ -0.64
PCNX1-215ENST00000557428 PRDM10Q9NQV6 1147 aa11.05□□□□□ -0.64
PCNX1-215ENST00000557428 SCN7AQ01118 1682 aa11.04□□□□□ -0.64
PCNX1-215ENST00000557428 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
PCNX1-215ENST00000557428 TAOK3Q9H2K8 898 aa11.04□□□□□ -0.64
PCNX1-215ENST00000557428 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
PCNX1-215ENST00000557428 SCN4AP35499 1836 aa11.03□□□□□ -0.64
PCNX1-215ENST00000557428 SLX4Q8IY92 1834 aa11.03□□□□□ -0.64
PCNX1-215ENST00000557428 VEGFBP49765 207 aa11.03□□□□□ -0.64
PCNX1-215ENST00000557428 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
PCNX1-215ENST00000557428 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
PCNX1-215ENST00000557428 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
PCNX1-215ENST00000557428 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
PCNX1-215ENST00000557428 PDE6BP35913 854 aa11.02□□□□□ -0.65
PCNX1-215ENST00000557428 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.65
PCNX1-215ENST00000557428 LDHDQ86WU2 507 aa11.02□□□□□ -0.65
PCNX1-215ENST00000557428 LGR6Q9HBX8 967 aa11.02□□□□□ -0.65
PCNX1-215ENST00000557428 MRC1P22897 1456 aa11.01□□□□□ -0.65
PCNX1-215ENST00000557428 UBR2Q8IWV8 1755 aa11.01□□□□□ -0.65
PCNX1-215ENST00000557428 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
PCNX1-215ENST00000557428 TBC1D9BQ66K14 1250 aa11.01□□□□□ -0.65
PCNX1-215ENST00000557428 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
PCNX1-215ENST00000557428 MORC1Q86VD1 984 aa11.01□□□□□ -0.65
PCNX1-215ENST00000557428 ABHD8Q96I13 439 aa11.01□□□□□ -0.65
PCNX1-215ENST00000557428 CCDC85CA6NKD9 419 aa11□□□□□ -0.65
PCNX1-215ENST00000557428 RNMTO43148 476 aaKnown RBP11□□□□□ -0.65
PCNX1-215ENST00000557428 GRM1Q13255 1194 aa11□□□□□ -0.65
PCNX1-215ENST00000557428 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
PCNX1-215ENST00000557428 TTC5Q8N0Z6 440 aa11□□□□□ -0.65
PCNX1-215ENST00000557428 CFAP44Q96MT7 982 aa11□□□□□ -0.65
PCNX1-215ENST00000557428 ABT1Q9ULW3 272 aaKnown RBP11□□□□□ -0.65
PCNX1-215ENST00000557428 PASKQ96RG2 1323 aa11□□□□□ -0.65
PCNX1-215ENST00000557428 A0A087WZG4 1122 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 HMOX1P09601 288 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 HSPA8P11142 646 aaKnown RBP10.99□□□□□ -0.65
PCNX1-215ENST00000557428 ST5P78524 1137 aa10.99□□□□□ -0.65
PCNX1-215ENST00000557428 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms