RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
PSEN1-215ENST00000556011 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
PSEN1-215ENST00000556011 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
PSEN1-215ENST00000556011 PNMA8AQ86V59 439 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-215ENST00000556011 USP34Q70CQ2 3546 aa12.13□□□□□ -0.47
PSEN1-215ENST00000556011 COL9A2Q14055 689 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-215ENST00000556011 ZNF296Q8WUU4 475 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-215ENST00000556011 ABCC11Q96J66 1382 aa12.12□□□□□ -0.47
PSEN1-215ENST00000556011 MAST4O15021 2626 aa12.11□□□□□ -0.47
PSEN1-215ENST00000556011 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
PSEN1-215ENST00000556011 DPF3Q92784 378 aa12.11□□□□□ -0.47
PSEN1-215ENST00000556011 ACEP12821 1306 aa12.11□□□□□ -0.47
PSEN1-215ENST00000556011 SSFA2P28290 1259 aa12.1□□□□□ -0.47
PSEN1-215ENST00000556011 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-215ENST00000556011 GUCD1Q96NT3 240 aa12.1□□□□□ -0.47
PSEN1-215ENST00000556011 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
PSEN1-215ENST00000556011 USP47Q96K76 1375 aa12.09□□□□□ -0.47
PSEN1-215ENST00000556011 SAFB2Q14151 953 aaKnown RBP eCLIP12.09□□□□□ -0.47
PSEN1-215ENST00000556011 MAP3K11Q16584 847 aa12.09□□□□□ -0.47
PSEN1-215ENST00000556011 CCDC7Q96M83 1385 aa12.08□□□□□ -0.48
PSEN1-215ENST00000556011 CELF2O95319 508 aaKnown RBP12.08□□□□□ -0.48
PSEN1-215ENST00000556011 TMEM132EQ6IEE7 984 aa12.08□□□□□ -0.48
PSEN1-215ENST00000556011 ABTB2Q8N961 1025 aa12.08□□□□□ -0.48
PSEN1-215ENST00000556011 PARP3Q9Y6F1 533 aa12.08□□□□□ -0.48
PSEN1-215ENST00000556011 WDFY4Q6ZS81 3184 aa12.07□□□□□ -0.48
PSEN1-215ENST00000556011 TJAP1Q5JTD0 557 aa12.07□□□□□ -0.48
PSEN1-215ENST00000556011 MYOM3Q5VTT5 1437 aa12.07□□□□□ -0.48
PSEN1-215ENST00000556011 C1QTNF1Q9BXJ1 281 aa12.07□□□□□ -0.48
PSEN1-215ENST00000556011 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
PSEN1-215ENST00000556011 FASNP49327 2511 aaKnown RBP12.07□□□□□ -0.48
PSEN1-215ENST00000556011 TMF1P82094 1093 aa12.06□□□□□ -0.48
PSEN1-215ENST00000556011 NLGN1Q8N2Q7 840 aa12.06□□□□□ -0.48
PSEN1-215ENST00000556011 DDX54Q8TDD1 881 aaKnown RBP12.06□□□□□ -0.48
PSEN1-215ENST00000556011 LRFN3Q9BTN0 628 aa12.06□□□□□ -0.48
PSEN1-215ENST00000556011 CDH23Q9H251 3354 aa12.05□□□□□ -0.48
PSEN1-215ENST00000556011 FER1L6Q2WGJ9 1857 aa12.05□□□□□ -0.48
PSEN1-215ENST00000556011 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
PSEN1-215ENST00000556011 FAM155AB1AL88 458 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-215ENST00000556011 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
PSEN1-215ENST00000556011 MAFAQ8NHW3 353 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-215ENST00000556011 STAP2Q9UGK3 403 aa12.03□□□□□ -0.48
PSEN1-215ENST00000556011 INSRP06213 1382 aa12.03□□□□□ -0.48
PSEN1-215ENST00000556011 RGS20O76081 388 aa12.02□□□□□ -0.49
PSEN1-215ENST00000556011 CSRNP1Q96S65 589 aa12.02□□□□□ -0.49
PSEN1-215ENST00000556011 IL2RBP14784 551 aa12.01□□□□□ -0.49
PSEN1-215ENST00000556011 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
PSEN1-215ENST00000556011 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
PSEN1-215ENST00000556011 KIF1BO60333 1816 aa12.01□□□□□ -0.49
PSEN1-215ENST00000556011 FLNBO75369 2602 aaKnown RBP12□□□□□ -0.49
PSEN1-215ENST00000556011 WTIPA6NIX2 430 aaPredicted RBP12□□□□□ -0.49
PSEN1-215ENST00000556011 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
PSEN1-215ENST00000556011 FAM161BQ96MY7 647 aa12□□□□□ -0.49
PSEN1-215ENST00000556011 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
PSEN1-215ENST00000556011 IRS2Q9Y4H2 1338 aa12□□□□□ -0.49
PSEN1-215ENST00000556011 ANKRD30AQ9BXX3 1397 aa12□□□□□ -0.49
PSEN1-215ENST00000556011 GPR179Q6PRD1 2367 aa11.99□□□□□ -0.49
PSEN1-215ENST00000556011 TBC1D8O95759 1140 aa11.99□□□□□ -0.49
PSEN1-215ENST00000556011 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
PSEN1-215ENST00000556011 TTC21AQ8NDW8 1320 aa11.99□□□□□ -0.49
PSEN1-215ENST00000556011 ZNF541Q9H0D2 1346 aa11.99□□□□□ -0.49
PSEN1-215ENST00000556011 DLEC1Q9Y238 1755 aa11.98□□□□□ -0.49
PSEN1-215ENST00000556011 ZBTB7BO15156 539 aaPredicted RBP11.98□□□□□ -0.49
PSEN1-215ENST00000556011 GNPATO15228 680 aa11.98□□□□□ -0.49
PSEN1-215ENST00000556011 ADRA2BP18089 450 aa11.98□□□□□ -0.49
PSEN1-215ENST00000556011 HUNKP57058 714 aa11.98□□□□□ -0.49
PSEN1-215ENST00000556011 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
PSEN1-215ENST00000556011 ZNF408Q9H9D4 720 aa11.98□□□□□ -0.49
PSEN1-215ENST00000556011 ZNF292O60281 2723 aa11.98□□□□□ -0.49
PSEN1-215ENST00000556011 YTHDC2Q9H6S0 1430 aaKnown RBP11.97□□□□□ -0.49
PSEN1-215ENST00000556011 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
PSEN1-215ENST00000556011 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
PSEN1-215ENST00000556011 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
PSEN1-215ENST00000556011 BCAMP50895 628 aa11.96□□□□□ -0.49
PSEN1-215ENST00000556011 SRPK2P78362 688 aaKnown RBP11.96□□□□□ -0.49
PSEN1-215ENST00000556011 LRIT3Q3SXY7 679 aa11.96□□□□□ -0.49
PSEN1-215ENST00000556011 DCHS1Q96JQ0 3298 aa11.96□□□□□ -0.49
PSEN1-215ENST00000556011 PALLDQ8WX93 1383 aa11.95□□□□□ -0.5
PSEN1-215ENST00000556011 KIF7Q2M1P5 1343 aa11.95□□□□□ -0.5
PSEN1-215ENST00000556011 GYS1P13807 737 aa11.95□□□□□ -0.5
PSEN1-215ENST00000556011 GPR25O00155 361 aa11.94□□□□□ -0.5
PSEN1-215ENST00000556011 RGMBQ6NW40 437 aa11.94□□□□□ -0.5
PSEN1-215ENST00000556011 LINC00116Q8NCU8 138 aa11.94□□□□□ -0.5
PSEN1-215ENST00000556011 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
PSEN1-215ENST00000556011 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
PSEN1-215ENST00000556011 NR2E3Q9Y5X4 410 aa11.94□□□□□ -0.5
PSEN1-215ENST00000556011 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
PSEN1-215ENST00000556011 TRIM17Q9Y577 477 aa11.92□□□□□ -0.5
PSEN1-215ENST00000556011 DAPK1P53355 1430 aa11.92□□□□□ -0.5
PSEN1-215ENST00000556011 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
PSEN1-215ENST00000556011 C21orf2O43822 256 aa11.91□□□□□ -0.5
PSEN1-215ENST00000556011 DDR1Q08345 913 aa11.91□□□□□ -0.5
PSEN1-215ENST00000556011 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
PSEN1-215ENST00000556011 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
PSEN1-215ENST00000556011 GLIS2Q9BZE0 524 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-215ENST00000556011 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
PSEN1-215ENST00000556011 POLR3AO14802 1390 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-215ENST00000556011 NHLH1Q02575 133 aa11.9□□□□□ -0.5
PSEN1-215ENST00000556011 CPSF1Q10570 1443 aaKnown RBP11.9□□□□□ -0.5
PSEN1-215ENST00000556011 ACAP1Q15027 740 aa11.9□□□□□ -0.5
PSEN1-215ENST00000556011 NAV2Q8IVL1 2488 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms