RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 IDI1Q13907 227 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 MAP3K11Q16584 847 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 TSHZ3Q63HK5 1081 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 CREBRFQ8IUR6 639 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 CCDC171Q6TFL3 1326 aa9.27□□□□□ -0.92
CHD8-209ENST00000555935 SLFN14P0C7P3 912 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 TNNT1P13805 278 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 ATP8B2P98198 1209 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 ZSCAN31Q96LW9 406 aaPredicted RBP9.27□□□□□ -0.93
CHD8-209ENST00000555935 SNX14Q9Y5W7 946 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 DLC1Q96QB1 1528 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 ELP1O95163 1332 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.93
CHD8-209ENST00000555935 RUFY3Q7L099 469 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 KRT222Q8N1A0 295 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 KIF18AQ8NI77 898 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 NUP62CLQ9H1M0 184 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 SH2B1Q9NRF2 756 aaPredicted RBP9.27□□□□□ -0.93
CHD8-209ENST00000555935 MTMR6Q9Y217 621 aa9.27□□□□□ -0.93
CHD8-209ENST00000555935 SGSM2O43147 1006 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 DNM1Q05193 864 aaKnown RBP9.26□□□□□ -0.93
CHD8-209ENST00000555935 SLC4A10Q6U841 1118 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 CCDC186Q7Z3E2 898 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 COG3Q96JB2 828 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 MRVI1Q9Y6F6 885 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 TYRO3Q06418 890 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 PLA2G4DQ86XP0 818 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 UNC5CLQ8IV45 518 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 ZNF397Q8NF99 534 aaPredicted RBP9.26□□□□□ -0.93
CHD8-209ENST00000555935 C16orf45Q96MC5 204 aaPredicted RBP9.26□□□□□ -0.93
CHD8-209ENST00000555935 TMEM51Q9NW97 253 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 NRKQ7Z2Y5 1582 aa9.26□□□□□ -0.93
CHD8-209ENST00000555935 CAVIN2O95810 425 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 CDC25BP30305 580 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 ZNF75DP51815 510 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 KRT85P78386 507 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 TERF2Q15554 542 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 ZSCAN25Q6NSZ9 544 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 CRB1P82279 1406 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 TCHHQ07283 1943 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 NEMFO60524 1076 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 IGSF3O75054 1194 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 RAB11FIP3O75154 756 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 GJB2P29033 226 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 NME9Q86XW9 330 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 DRC7Q8IY82 874 aa9.25□□□□□ -0.93
CHD8-209ENST00000555935 TDRD7Q8NHU6 1098 aaKnown RBP9.25□□□□□ -0.93
CHD8-209ENST00000555935 LSG1Q9H089 658 aaKnown RBP9.25□□□□□ -0.93
CHD8-209ENST00000555935 DDX19AQ9NUU7 478 aaKnown RBP9.25□□□□□ -0.93
CHD8-209ENST00000555935 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 VPS53Q5VIR6 699 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 RBM43Q6ZSC3 357 aaKnown RBP9.24□□□□□ -0.93
CHD8-209ENST00000555935 IL25Q9H293 177 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 TMEM131LA2VDJ0 1609 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 PNMA6EA0A0J9YXQ4 647 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 F6X3S4 739 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 TPD52L1Q16890 204 aaPredicted RBP9.24□□□□□ -0.93
CHD8-209ENST00000555935 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 CEP135Q66GS9 1140 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 LUZP1Q86V48 1076 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 TM6SF1Q9BZW5 370 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 TRIM5Q9C035 493 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 HYPKQ9NX55 129 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 FAM53CQ9NYF3 392 aa9.24□□□□□ -0.93
CHD8-209ENST00000555935 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
CHD8-209ENST00000555935 LRMPQ12912 555 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 RNF20Q5VTR2 975 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 MCM10Q7L590 875 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 G2E3Q7L622 706 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 CNTROBQ8N137 903 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 STK31Q9BXU1 1019 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 TNMDQ9H2S6 317 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 PDCP20941 246 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
CHD8-209ENST00000555935 ANO6Q4KMQ2 910 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 SULT6B1Q6IMI4 303 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 CCDC83Q8IWF9 413 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 RASEFQ8IZ41 740 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 SCAND2PQ9GZW5 306 aaPredicted RBP9.23□□□□□ -0.93
CHD8-209ENST00000555935 ADGRL3Q9HAR2 1447 aa9.23□□□□□ -0.93
CHD8-209ENST00000555935 PXDNLA1KZ92 1463 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 VPS37CA5D8V6 355 aaPredicted RBP9.22□□□□□ -0.93
CHD8-209ENST00000555935 CASTP20810 708 aaKnown RBP9.22□□□□□ -0.93
CHD8-209ENST00000555935 SLC20A2Q08357 652 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 TTC6Q86TZ1 520 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 ERO1AQ96HE7 468 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 PDRG1Q9NUG6 133 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 CALCOCO1Q9P1Z2 691 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 NPHP3Q7Z494 1330 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 TTC21AQ8NDW8 1320 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 CDK11BP21127 795 aaKnown RBP9.22□□□□□ -0.93
CHD8-209ENST00000555935 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
CHD8-209ENST00000555935 EIF4A2Q14240 407 aaKnown RBP9.22□□□□□ -0.93
CHD8-209ENST00000555935 PI4K2BQ8TCG2 481 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 SSH3Q8TE77 659 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 RUFY2Q8WXA3 655 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 KCNB2Q92953 911 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms