RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 MAP3K2Q9Y2U5 619 aa22.95■■□□□ 1.26
GABRB3-209ENST00000555632 USP16Q9Y5T5 823 aa22.95■■□□□ 1.26
GABRB3-209ENST00000555632 UBTFL1P0CB47 393 aaPredicted RBP22.94■■□□□ 1.26
GABRB3-209ENST00000555632 BMP2KLQ5H9B9 411 aa22.94■■□□□ 1.26
GABRB3-209ENST00000555632 DDX54Q8TDD1 881 aaKnown RBP22.94■■□□□ 1.26
GABRB3-209ENST00000555632 EXOC6BQ9Y2D4 811 aa22.94■■□□□ 1.26
GABRB3-209ENST00000555632 HMMRO75330 724 aa22.94■■□□□ 1.26
GABRB3-209ENST00000555632 PIP4K2AP48426 406 aaPredicted RBP22.94■■□□□ 1.26
GABRB3-209ENST00000555632 AIMP1Q12904 312 aaKnown RBP22.94■■□□□ 1.26
GABRB3-209ENST00000555632 DDX21Q9NR30 783 aaKnown RBP eCLIP22.94■■□□□ 1.26
GABRB3-209ENST00000555632 MYL6BP14649 208 aa22.93■■□□□ 1.26
GABRB3-209ENST00000555632 ATP8B2P98198 1209 aa22.93■■□□□ 1.26
GABRB3-209ENST00000555632 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
GABRB3-209ENST00000555632 DDRGK1Q96HY6 314 aa22.93■■□□□ 1.26
GABRB3-209ENST00000555632 GSPT1P15170 499 aaKnown RBP22.92■■□□□ 1.26
GABRB3-209ENST00000555632 HYPKQ9NX55 129 aa22.92■■□□□ 1.26
GABRB3-209ENST00000555632 SHANK3Q9BYB0 1731 aa22.92■■□□□ 1.26
GABRB3-209ENST00000555632 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
GABRB3-209ENST00000555632 KSR2Q6VAB6 950 aa22.91■■□□□ 1.26
GABRB3-209ENST00000555632 TBC1D32Q96NH3 1257 aa22.91■■□□□ 1.26
GABRB3-209ENST00000555632 CWF19L2Q2TBE0 894 aaKnown RBP22.9■■□□□ 1.26
GABRB3-209ENST00000555632 SNRPA1P09661 255 aaKnown RBP22.89■■□□□ 1.25
GABRB3-209ENST00000555632 FMNL2Q96PY5 1086 aa22.89■■□□□ 1.25
GABRB3-209ENST00000555632 AHDC1Q5TGY3 1603 aaPredicted RBP22.88■■□□□ 1.25
GABRB3-209ENST00000555632 UPF2Q9HAU5 1272 aaKnown RBP22.88■■□□□ 1.25
GABRB3-209ENST00000555632 GLI3P10071 1580 aa22.88■■□□□ 1.25
GABRB3-209ENST00000555632 NKX1-1Q15270 411 aaPredicted RBP22.88■■□□□ 1.25
GABRB3-209ENST00000555632 LRP10Q7Z4F1 713 aa22.88■■□□□ 1.25
GABRB3-209ENST00000555632 PPP1R42Q7Z4L9 355 aa22.87■■□□□ 1.25
GABRB3-209ENST00000555632 XAGE3Q8WTP9 111 aa22.86■■□□□ 1.25
GABRB3-209ENST00000555632 TTC22Q5TAA0 569 aa22.85■■□□□ 1.25
GABRB3-209ENST00000555632 COPS6Q7L5N1 327 aa22.85■■□□□ 1.25
GABRB3-209ENST00000555632 SSH3Q8TE77 659 aa22.85■■□□□ 1.25
GABRB3-209ENST00000555632 COL16A1Q07092 1604 aaPredicted RBP22.85■■□□□ 1.25
GABRB3-209ENST00000555632 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
GABRB3-209ENST00000555632 IBTKQ9P2D0 1353 aaPredicted RBP22.84■■□□□ 1.25
GABRB3-209ENST00000555632 TBC1D9Q6ZT07 1266 aa22.84■■□□□ 1.25
GABRB3-209ENST00000555632 RIC3Q7Z5B4 369 aa22.83■■□□□ 1.25
GABRB3-209ENST00000555632 C22orf23Q9BZE7 217 aa22.83■■□□□ 1.25
GABRB3-209ENST00000555632 SRGAP3O43295 1099 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 PTCD1O75127 700 aaKnown RBP22.82■■□□□ 1.24
GABRB3-209ENST00000555632 DDX58O95786 925 aaKnown RBP22.82■■□□□ 1.24
GABRB3-209ENST00000555632 IGKV5-2P06315 115 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 TSHZ3Q63HK5 1081 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 LRRCC1Q9C099 1032 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 C9orf78Q9NZ63 289 aaPredicted RBP22.82■■□□□ 1.24
GABRB3-209ENST00000555632 COL22A1Q8NFW1 1626 aaPredicted RBP22.82■■□□□ 1.24
GABRB3-209ENST00000555632 COL14A1Q05707 1796 aaKnown RBP22.82■■□□□ 1.24
GABRB3-209ENST00000555632 ALDH1L1O75891 902 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 POLA2Q14181 598 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 LINS1Q8NG48 757 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 TOGARAM1Q9Y4F4 1720 aa22.82■■□□□ 1.24
GABRB3-209ENST00000555632 ADAMTS2O95450 1211 aa22.81■■□□□ 1.24
GABRB3-209ENST00000555632 PIP4K2BP78356 416 aa22.81■■□□□ 1.24
GABRB3-209ENST00000555632 KCPQ6ZWJ8 1503 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 SALL3Q9BXA9 1300 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 PDE1AP54750 535 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 UBR2Q8IWV8 1755 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 NBPF26B4DH59 902 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 SURF6O75683 361 aaKnown RBP22.79■■□□□ 1.24
GABRB3-209ENST00000555632 SDSP20132 328 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 NBPF14Q5TI25 921 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 NBPF10Q6P3W6 841 aaKnown RBP22.79■■□□□ 1.24
GABRB3-209ENST00000555632 NBPF15Q8N660 670 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 KAZALD1Q96I82 304 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 IL1RAPL2Q9NP60 686 aa22.79■■□□□ 1.24
GABRB3-209ENST00000555632 ANKRD13DQ6ZTN6 518 aa22.78■■□□□ 1.24
GABRB3-209ENST00000555632 DISP2A7MBM2 1401 aa22.78■■□□□ 1.24
GABRB3-209ENST00000555632 GRM8O00222 908 aa22.78■■□□□ 1.24
GABRB3-209ENST00000555632 MYD88Q99836 296 aa22.78■■□□□ 1.24
GABRB3-209ENST00000555632 PHLPP1O60346 1717 aa22.77■■□□□ 1.24
GABRB3-209ENST00000555632 CDC45O75419 566 aa22.77■■□□□ 1.24
GABRB3-209ENST00000555632 DAXXQ9UER7 740 aaPredicted RBP22.77■■□□□ 1.24
GABRB3-209ENST00000555632 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
GABRB3-209ENST00000555632 LAMB4A4D0S4 1761 aa22.76■■□□□ 1.23
GABRB3-209ENST00000555632 NEURL1BA8MQ27 555 aa22.76■■□□□ 1.23
GABRB3-209ENST00000555632 A1BGP04217 495 aa22.76■■□□□ 1.23
GABRB3-209ENST00000555632 SUCLG2Q96I99 432 aa22.76■■□□□ 1.23
GABRB3-209ENST00000555632 METTL22Q9BUU2 404 aaPredicted RBP22.76■■□□□ 1.23
GABRB3-209ENST00000555632 OSBPL3Q9H4L5 887 aa22.76■■□□□ 1.23
GABRB3-209ENST00000555632 PIGBQ92521 554 aa22.75■■□□□ 1.23
GABRB3-209ENST00000555632 TMOD3Q9NYL9 352 aa22.75■■□□□ 1.23
GABRB3-209ENST00000555632 UTYO14607 1347 aa22.75■■□□□ 1.23
GABRB3-209ENST00000555632 ASAP1Q9ULH1 1129 aa22.75■■□□□ 1.23
GABRB3-209ENST00000555632 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
GABRB3-209ENST00000555632 MTX1Q13505 466 aa22.74■■□□□ 1.23
GABRB3-209ENST00000555632 NBR1Q14596 966 aa22.74■■□□□ 1.23
GABRB3-209ENST00000555632 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
GABRB3-209ENST00000555632 BICC1Q9H694 974 aaKnown RBP22.74■■□□□ 1.23
GABRB3-209ENST00000555632 NUTM2BA6NNL0 878 aaPredicted RBP22.73■■□□□ 1.23
GABRB3-209ENST00000555632 NUTM2EB1AL46 878 aaPredicted RBP22.73■■□□□ 1.23
GABRB3-209ENST00000555632 MX1P20591 662 aa22.73■■□□□ 1.23
GABRB3-209ENST00000555632 GCKRQ14397 625 aa22.73■■□□□ 1.23
GABRB3-209ENST00000555632 NUTM2AQ8IVF1 878 aaPredicted RBP22.73■■□□□ 1.23
GABRB3-209ENST00000555632 PA2G4Q9UQ80 394 aaKnown RBP22.73■■□□□ 1.23
GABRB3-209ENST00000555632 NEXNQ0ZGT2 675 aa22.73■■□□□ 1.23
GABRB3-209ENST00000555632 RHPN1Q8TCX5 695 aa22.73■■□□□ 1.23
GABRB3-209ENST00000555632 KAT6BQ8WYB5 2073 aa22.73■■□□□ 1.23
GABRB3-209ENST00000555632 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
GABRB3-209ENST00000555632 RBM25P49756 843 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms