RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
NEK9-206ENST00000555537 NFKBIEO00221 500 aa11.55□□□□□ -0.56
NEK9-206ENST00000555537 SERPINB2P05120 415 aa11.55□□□□□ -0.56
NEK9-206ENST00000555537 SLC39A6Q13433 755 aa11.55□□□□□ -0.56
NEK9-206ENST00000555537 C2CD5Q86YS7 1000 aa11.55□□□□□ -0.56
NEK9-206ENST00000555537 TTLL6Q8N841 843 aa11.55□□□□□ -0.56
NEK9-206ENST00000555537 BCL2L12Q9HB09 334 aa11.55□□□□□ -0.56
NEK9-206ENST00000555537 LGR6Q9HBX8 967 aa11.55□□□□□ -0.56
NEK9-206ENST00000555537 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
NEK9-206ENST00000555537 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
NEK9-206ENST00000555537 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
NEK9-206ENST00000555537 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
NEK9-206ENST00000555537 TJP1Q07157 1748 aa11.54□□□□□ -0.56
NEK9-206ENST00000555537 SOS1Q07889 1333 aaPredicted RBP11.54□□□□□ -0.56
NEK9-206ENST00000555537 ZC3H4Q9UPT8 1303 aaKnown RBP11.54□□□□□ -0.56
NEK9-206ENST00000555537 CCDC88AQ3V6T2 1871 aa11.53□□□□□ -0.56
NEK9-206ENST00000555537 ADAMTS7Q9UKP4 1686 aa11.53□□□□□ -0.56
NEK9-206ENST00000555537 H0YIN7 160 aa11.53□□□□□ -0.56
NEK9-206ENST00000555537 CYP19A1P11511 503 aaPredicted RBP11.53□□□□□ -0.56
NEK9-206ENST00000555537 SULT6B1Q6IMI4 303 aa11.53□□□□□ -0.56
NEK9-206ENST00000555537 DPY19L2Q6NUT2 758 aa11.53□□□□□ -0.56
NEK9-206ENST00000555537 NARFQ9UHQ1 456 aa11.53□□□□□ -0.56
NEK9-206ENST00000555537 AFDNP55196 1824 aaKnown RBP11.52□□□□□ -0.57
NEK9-206ENST00000555537 FOXN1O15353 648 aa11.52□□□□□ -0.57
NEK9-206ENST00000555537 C21orf2O43822 256 aa11.52□□□□□ -0.57
NEK9-206ENST00000555537 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.57
NEK9-206ENST00000555537 ZBTB1Q9Y2K1 713 aa11.52□□□□□ -0.57
NEK9-206ENST00000555537 CARMIL3Q8ND23 1372 aa11.52□□□□□ -0.57
NEK9-206ENST00000555537 DDNO94850 711 aaPredicted RBP11.51□□□□□ -0.57
NEK9-206ENST00000555537 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
NEK9-206ENST00000555537 ERFEQ4G0M1 354 aa11.51□□□□□ -0.57
NEK9-206ENST00000555537 SLC52A2Q9HAB3 445 aa11.51□□□□□ -0.57
NEK9-206ENST00000555537 CHADLQ6NUI6 762 aa11.5□□□□□ -0.57
NEK9-206ENST00000555537 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
NEK9-206ENST00000555537 COL15A1P39059 1388 aa11.5□□□□□ -0.57
NEK9-206ENST00000555537 TIAM2Q8IVF5 1701 aa11.49□□□□□ -0.57
NEK9-206ENST00000555537 PANK3Q9H999 370 aa11.49□□□□□ -0.57
NEK9-206ENST00000555537 RNMTO43148 476 aaKnown RBP11.48□□□□□ -0.57
NEK9-206ENST00000555537 AKAP4Q5JQC9 854 aa11.48□□□□□ -0.57
NEK9-206ENST00000555537 TBC1D9BQ66K14 1250 aa11.48□□□□□ -0.57
NEK9-206ENST00000555537 NRXN2Q9P2S2 1712 aa11.48□□□□□ -0.57
NEK9-206ENST00000555537 IL13P35225 146 aa11.47□□□□□ -0.57
NEK9-206ENST00000555537 MORC1Q86VD1 984 aa11.47□□□□□ -0.57
NEK9-206ENST00000555537 SCN11AQ9UI33 1791 aa11.46□□□□□ -0.57
NEK9-206ENST00000555537 DLEC1Q9Y238 1755 aa11.46□□□□□ -0.57
NEK9-206ENST00000555537 HMOX1P09601 288 aa11.46□□□□□ -0.57
NEK9-206ENST00000555537 VEGFBP49765 207 aa11.46□□□□□ -0.57
NEK9-206ENST00000555537 PRR5LQ6MZQ0 368 aa11.46□□□□□ -0.57
NEK9-206ENST00000555537 BRIP1Q9BX63 1249 aa11.46□□□□□ -0.57
NEK9-206ENST00000555537 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
NEK9-206ENST00000555537 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
NEK9-206ENST00000555537 CNTNAP1P78357 1384 aa11.45□□□□□ -0.58
NEK9-206ENST00000555537 PDE6BP35913 854 aa11.45□□□□□ -0.58
NEK9-206ENST00000555537 LBX1P52954 281 aa11.45□□□□□ -0.58
NEK9-206ENST00000555537 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
NEK9-206ENST00000555537 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
NEK9-206ENST00000555537 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
NEK9-206ENST00000555537 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
NEK9-206ENST00000555537 CTCFP49711 727 aaPredicted RBP11.44□□□□□ -0.58
NEK9-206ENST00000555537 MTHFSDQ2M296 383 aaKnown RBP11.44□□□□□ -0.58
NEK9-206ENST00000555537 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
NEK9-206ENST00000555537 STARD3NLO95772 234 aa11.43□□□□□ -0.58
NEK9-206ENST00000555537 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
NEK9-206ENST00000555537 EAPPQ56P03 285 aaPredicted RBP11.43□□□□□ -0.58
NEK9-206ENST00000555537 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
NEK9-206ENST00000555537 AIDAQ96BJ3 306 aa11.43□□□□□ -0.58
NEK9-206ENST00000555537 TAF1DQ9H5J8 278 aaPredicted RBP11.43□□□□□ -0.58
NEK9-206ENST00000555537 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
NEK9-206ENST00000555537 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
NEK9-206ENST00000555537 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 A0A087WZG4 1122 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 NPHP1O15259 732 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 A1BGP04217 495 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 PRPF40BQ6NWY9 871 aaKnown RBP11.42□□□□□ -0.58
NEK9-206ENST00000555537 LDHDQ86WU2 507 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 ZNF496Q96IT1 587 aaPredicted RBP11.42□□□□□ -0.58
NEK9-206ENST00000555537 DICER1Q9UPY3 1922 aaKnown RBP11.42□□□□□ -0.58
NEK9-206ENST00000555537 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
NEK9-206ENST00000555537 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 SLC34A2O95436 690 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 SRGNP10124 158 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 OLFM4Q6UX06 510 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 TTC5Q8N0Z6 440 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 ABHD8Q96I13 439 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 SETDB2Q96T68 719 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
NEK9-206ENST00000555537 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
NEK9-206ENST00000555537 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
NEK9-206ENST00000555537 HSPA8P11142 646 aaKnown RBP11.4□□□□□ -0.58
NEK9-206ENST00000555537 PIP4K2AP48426 406 aaPredicted RBP11.4□□□□□ -0.58
NEK9-206ENST00000555537 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
NEK9-206ENST00000555537 MAP1SQ66K74 1059 aaPredicted RBP11.4□□□□□ -0.58
NEK9-206ENST00000555537 STYK1Q6J9G0 422 aa11.4□□□□□ -0.58
NEK9-206ENST00000555537 CNBD1Q8NA66 436 aa11.4□□□□□ -0.58
NEK9-206ENST00000555537 MASTLQ96GX5 879 aa11.4□□□□□ -0.58
NEK9-206ENST00000555537 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
NEK9-206ENST00000555537 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms