RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 ARFGEF1Q9Y6D6 1849 aa20.09■□□□□ 0.81
TMEM106C-216ENST00000551305 PER1O15534 1290 aaPredicted RBP20.08■□□□□ 0.81
TMEM106C-216ENST00000551305 DIAPH1O60610 1272 aaKnown RBP20.08■□□□□ 0.81
TMEM106C-216ENST00000551305 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.81
TMEM106C-216ENST00000551305 BCL2L12Q9HB09 334 aa20.08■□□□□ 0.81
TMEM106C-216ENST00000551305 NARFQ9UHQ1 456 aa20.08■□□□□ 0.81
TMEM106C-216ENST00000551305 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.8
TMEM106C-216ENST00000551305 DNAJC5GQ8N7S2 189 aa20.08■□□□□ 0.8
TMEM106C-216ENST00000551305 MRC1P22897 1456 aa20.07■□□□□ 0.8
TMEM106C-216ENST00000551305 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
TMEM106C-216ENST00000551305 COL15A1P39059 1388 aa20.06■□□□□ 0.8
TMEM106C-216ENST00000551305 RRAGCQ9HB90 399 aa20.06■□□□□ 0.8
TMEM106C-216ENST00000551305 SERPINB2P05120 415 aa20.05■□□□□ 0.8
TMEM106C-216ENST00000551305 HTRA3P83110 453 aa20.05■□□□□ 0.8
TMEM106C-216ENST00000551305 RASSF7Q02833 373 aa20.05■□□□□ 0.8
TMEM106C-216ENST00000551305 C16orf71Q8IYS4 520 aaPredicted RBP20.05■□□□□ 0.8
TMEM106C-216ENST00000551305 RBM46Q8TBY0 533 aaKnown RBP20.05■□□□□ 0.8
TMEM106C-216ENST00000551305 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
TMEM106C-216ENST00000551305 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
TMEM106C-216ENST00000551305 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
TMEM106C-216ENST00000551305 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
TMEM106C-216ENST00000551305 PRELPP51888 382 aa20.02■□□□□ 0.8
TMEM106C-216ENST00000551305 IL17REQ8NFR9 667 aa20.02■□□□□ 0.8
TMEM106C-216ENST00000551305 AFDNP55196 1824 aaKnown RBP20.02■□□□□ 0.8
TMEM106C-216ENST00000551305 U2SURPO15042 1029 aaKnown RBP20.01■□□□□ 0.79
TMEM106C-216ENST00000551305 C2CD5Q86YS7 1000 aa20.01■□□□□ 0.79
TMEM106C-216ENST00000551305 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
TMEM106C-216ENST00000551305 EIF5P55010 431 aaKnown RBP20■□□□□ 0.79
TMEM106C-216ENST00000551305 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
TMEM106C-216ENST00000551305 SBF1O95248 1867 aa20■□□□□ 0.79
TMEM106C-216ENST00000551305 CARMIL3Q8ND23 1372 aa20■□□□□ 0.79
TMEM106C-216ENST00000551305 STARD3NLO95772 234 aa19.99■□□□□ 0.79
TMEM106C-216ENST00000551305 TTLL6Q8N841 843 aa19.99■□□□□ 0.79
TMEM106C-216ENST00000551305 NRXN2Q9P2S2 1712 aa19.99■□□□□ 0.79
TMEM106C-216ENST00000551305 TBC1D9BQ66K14 1250 aa19.98■□□□□ 0.79
TMEM106C-216ENST00000551305 CCDC24Q8N4L8 307 aa19.98■□□□□ 0.79
TMEM106C-216ENST00000551305 ZNF330Q9Y3S2 320 aaPredicted RBP19.98■□□□□ 0.79
TMEM106C-216ENST00000551305 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
TMEM106C-216ENST00000551305 GNAT3A8MTJ3 354 aa19.97■□□□□ 0.79
TMEM106C-216ENST00000551305 TEFQ10587 303 aa19.97■□□□□ 0.79
TMEM106C-216ENST00000551305 FSTL1Q12841 308 aa19.97■□□□□ 0.79
TMEM106C-216ENST00000551305 ZNF790Q6PG37 636 aa19.97■□□□□ 0.79
TMEM106C-216ENST00000551305 TBC1D2BQ9UPU7 963 aa19.97■□□□□ 0.79
TMEM106C-216ENST00000551305 UBR2Q8IWV8 1755 aa19.97■□□□□ 0.79
TMEM106C-216ENST00000551305 H0YIN7 160 aa19.96■□□□□ 0.79
TMEM106C-216ENST00000551305 HEG1Q9ULI3 1381 aa19.96■□□□□ 0.79
TMEM106C-216ENST00000551305 A0A087WZG4 1122 aa19.95■□□□□ 0.79
TMEM106C-216ENST00000551305 KCNQ3O43525 872 aa19.95■□□□□ 0.79
TMEM106C-216ENST00000551305 LMNB1P20700 586 aa19.95■□□□□ 0.79
TMEM106C-216ENST00000551305 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.79
TMEM106C-216ENST00000551305 WDR90Q96KV7 1748 aa19.95■□□□□ 0.78
TMEM106C-216ENST00000551305 A1BGP04217 495 aa19.95■□□□□ 0.78
TMEM106C-216ENST00000551305 ZNF622Q969S3 477 aaKnown RBP eCLIP19.95■□□□□ 0.78
TMEM106C-216ENST00000551305 ZNF219Q9P2Y4 722 aaPredicted RBP19.95■□□□□ 0.78
TMEM106C-216ENST00000551305 NFKBIEO00221 500 aa19.94■□□□□ 0.78
TMEM106C-216ENST00000551305 KLRG1Q96E93 195 aa19.94■□□□□ 0.78
TMEM106C-216ENST00000551305 PHACTR3Q96KR7 559 aa19.94■□□□□ 0.78
TMEM106C-216ENST00000551305 GLTPD2A6NH11 291 aa19.93■□□□□ 0.78
TMEM106C-216ENST00000551305 TEX13AQ9BXU3 409 aaPredicted RBP19.93■□□□□ 0.78
TMEM106C-216ENST00000551305 DLEC1Q9Y238 1755 aa19.92■□□□□ 0.78
TMEM106C-216ENST00000551305 PRR5LQ6MZQ0 368 aa19.92■□□□□ 0.78
TMEM106C-216ENST00000551305 SMC1BQ8NDV3 1235 aa19.92■□□□□ 0.78
TMEM106C-216ENST00000551305 NPC1L1Q9UHC9 1359 aa19.91■□□□□ 0.78
TMEM106C-216ENST00000551305 TNRC6CQ9HCJ0 1690 aaKnown RBP19.91■□□□□ 0.78
TMEM106C-216ENST00000551305 C21orf2O43822 256 aa19.91■□□□□ 0.78
TMEM106C-216ENST00000551305 IL6STP40189 918 aaPredicted RBP19.91■□□□□ 0.78
TMEM106C-216ENST00000551305 FMNL2Q96PY5 1086 aa19.91■□□□□ 0.78
TMEM106C-216ENST00000551305 BRIP1Q9BX63 1249 aa19.91■□□□□ 0.78
TMEM106C-216ENST00000551305 ZC3H4Q9UPT8 1303 aaKnown RBP19.91■□□□□ 0.78
TMEM106C-216ENST00000551305 BTBD11A6QL63 1104 aa19.9■□□□□ 0.78
TMEM106C-216ENST00000551305 VEGFAP15692 232 aaPredicted RBP19.9■□□□□ 0.78
TMEM106C-216ENST00000551305 PRKAR2BP31323 418 aa19.9■□□□□ 0.78
TMEM106C-216ENST00000551305 PIP4K2AP48426 406 aaPredicted RBP19.9■□□□□ 0.78
TMEM106C-216ENST00000551305 CAMTA2O94983 1202 aa19.89■□□□□ 0.77
TMEM106C-216ENST00000551305 PDE6BP35913 854 aa19.89■□□□□ 0.77
TMEM106C-216ENST00000551305 JMYQ8N9B5 988 aa19.89■□□□□ 0.77
TMEM106C-216ENST00000551305 USP16Q9Y5T5 823 aa19.89■□□□□ 0.77
TMEM106C-216ENST00000551305 CEMIPQ8WUJ3 1361 aa19.89■□□□□ 0.77
TMEM106C-216ENST00000551305 ANKRD31Q8N7Z5 1873 aa19.89■□□□□ 0.77
TMEM106C-216ENST00000551305 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
TMEM106C-216ENST00000551305 PRAMEF22A3QJZ6 481 aa19.88■□□□□ 0.77
TMEM106C-216ENST00000551305 POTECB2RU33 542 aa19.88■□□□□ 0.77
TMEM106C-216ENST00000551305 SETDB2Q96T68 719 aa19.88■□□□□ 0.77
TMEM106C-216ENST00000551305 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
TMEM106C-216ENST00000551305 CCDC88AQ3V6T2 1871 aa19.87■□□□□ 0.77
TMEM106C-216ENST00000551305 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
TMEM106C-216ENST00000551305 DZIP3Q86Y13 1208 aaKnown RBP19.86■□□□□ 0.77
TMEM106C-216ENST00000551305 SCN7AQ01118 1682 aa19.86■□□□□ 0.77
TMEM106C-216ENST00000551305 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
TMEM106C-216ENST00000551305 CNBD1Q8NA66 436 aa19.85■□□□□ 0.77
TMEM106C-216ENST00000551305 PDZRN3Q9UPQ7 1066 aa19.85■□□□□ 0.77
TMEM106C-216ENST00000551305 NPHP1O15259 732 aa19.84■□□□□ 0.77
TMEM106C-216ENST00000551305 COL13A1Q5TAT6 717 aaPredicted RBP19.84■□□□□ 0.77
TMEM106C-216ENST00000551305 MCM10Q7L590 875 aa19.84■□□□□ 0.77
TMEM106C-216ENST00000551305 CFAP53Q96M91 514 aa19.84■□□□□ 0.77
TMEM106C-216ENST00000551305 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
TMEM106C-216ENST00000551305 TIAM2Q8IVF5 1701 aa19.84■□□□□ 0.77
TMEM106C-216ENST00000551305 DCTN1Q14203 1278 aa19.83■□□□□ 0.77
TMEM106C-216ENST00000551305 DPY19L2Q6NUT2 758 aa19.83■□□□□ 0.77
TMEM106C-216ENST00000551305 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms