RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	PDIA6	Q15084	440 aa		18.41	■□□□□ 0.54
PDE1B-206	ENST00000550285	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.41	■□□□□ 0.54
PDE1B-206	ENST00000550285	DBF4	Q9UBU7	674 aa	Predicted RBP	18.41	■□□□□ 0.54
PDE1B-206	ENST00000550285	ASAP1	Q9ULH1	1129 aa		18.41	■□□□□ 0.54
PDE1B-206	ENST00000550285	SNRPA1	P09661	255 aa	Known RBP	18.41	■□□□□ 0.54
PDE1B-206	ENST00000550285	AAMP	Q13685	434 aa		18.41	■□□□□ 0.54
PDE1B-206	ENST00000550285	PAPPA	Q13219	1627 aa		18.4	■□□□□ 0.54
PDE1B-206	ENST00000550285	SYTL4	Q96C24	671 aa	Predicted RBP	18.4	■□□□□ 0.54
PDE1B-206	ENST00000550285	KCP	Q6ZWJ8	1503 aa		18.4	■□□□□ 0.54
PDE1B-206	ENST00000550285	UBR2	Q8IWV8	1755 aa		18.4	■□□□□ 0.54
PDE1B-206	ENST00000550285	AFF2	P51816	1311 aa		18.38	■□□□□ 0.53
PDE1B-206	ENST00000550285	MYL6B	P14649	208 aa		18.38	■□□□□ 0.53
PDE1B-206	ENST00000550285	PRIM1	P49642	420 aa	Known RBP	18.38	■□□□□ 0.53
PDE1B-206	ENST00000550285	ATG3	Q9NT62	314 aa		18.38	■□□□□ 0.53
PDE1B-206	ENST00000550285	ACSBG1	Q96GR2	724 aa		18.38	■□□□□ 0.53
PDE1B-206	ENST00000550285	MEIS3	Q99687	375 aa		18.38	■□□□□ 0.53
PDE1B-206	ENST00000550285	DOT1L	Q8TEK3	1739 aa		18.37	■□□□□ 0.53
PDE1B-206	ENST00000550285	PI4KAP2	A4QPH2	592 aa		18.37	■□□□□ 0.53
PDE1B-206	ENST00000550285	PI4KAP1	Q8N8J0	262 aa		18.37	■□□□□ 0.53
PDE1B-206	ENST00000550285	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.37	■□□□□ 0.53
PDE1B-206	ENST00000550285	AIMP1	Q12904	312 aa	Known RBP	18.37	■□□□□ 0.53
PDE1B-206	ENST00000550285	BCL9	O00512	1426 aa		18.36	■□□□□ 0.53
PDE1B-206	ENST00000550285		A0A0G2JS52	829 aa		18.36	■□□□□ 0.53
PDE1B-206	ENST00000550285	CHMP4A	Q9BY43	222 aa		18.36	■□□□□ 0.53
PDE1B-206	ENST00000550285	ADCY9	O60503	1353 aa		18.36	■□□□□ 0.53
PDE1B-206	ENST00000550285	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.35	■□□□□ 0.53
PDE1B-206	ENST00000550285	CCT4	P50991	539 aa	Known RBP	18.35	■□□□□ 0.53
PDE1B-206	ENST00000550285	LRP10	Q7Z4F1	713 aa		18.35	■□□□□ 0.53
PDE1B-206	ENST00000550285	TSHZ2	Q9NRE2	1034 aa		18.35	■□□□□ 0.53
PDE1B-206	ENST00000550285	SIRT2	Q8IXJ6	389 aa		18.34	■□□□□ 0.53
PDE1B-206	ENST00000550285	RWDD1	Q9H446	243 aa	Predicted RBP	18.34	■□□□□ 0.53
PDE1B-206	ENST00000550285	HYPK	Q9NX55	129 aa		18.34	■□□□□ 0.53
PDE1B-206	ENST00000550285	NBPF26	B4DH59	902 aa		18.33	■□□□□ 0.53
PDE1B-206	ENST00000550285	NBPF14	Q5TI25	921 aa		18.33	■□□□□ 0.53
PDE1B-206	ENST00000550285	NBPF10	Q6P3W6	841 aa	Known RBP	18.33	■□□□□ 0.53
PDE1B-206	ENST00000550285	NBPF15	Q8N660	670 aa		18.33	■□□□□ 0.53
PDE1B-206	ENST00000550285	RBM42	Q9BTD8	480 aa	Known RBP	18.33	■□□□□ 0.53
PDE1B-206	ENST00000550285	LAMB4	A4D0S4	1761 aa		18.33	■□□□□ 0.52
PDE1B-206	ENST00000550285	A1BG	P04217	495 aa		18.33	■□□□□ 0.52
PDE1B-206	ENST00000550285	XAGE3	Q8WTP9	111 aa		18.33	■□□□□ 0.52
PDE1B-206	ENST00000550285	DNAAF4	Q8WXU2	420 aa		18.33	■□□□□ 0.52
PDE1B-206	ENST00000550285	GJD4	Q96KN9	370 aa	Predicted RBP	18.33	■□□□□ 0.52
PDE1B-206	ENST00000550285	SLC4A9	Q96Q91	983 aa		18.33	■□□□□ 0.52
PDE1B-206	ENST00000550285	MAP3K2	Q9Y2U5	619 aa		18.33	■□□□□ 0.52
PDE1B-206	ENST00000550285	KCNQ2	O43526	872 aa		18.32	■□□□□ 0.52
PDE1B-206	ENST00000550285	HDAC1	Q13547	482 aa	Predicted RBP	18.32	■□□□□ 0.52
PDE1B-206	ENST00000550285	FAM182B	Q5T319	152 aa		18.32	■□□□□ 0.52
PDE1B-206	ENST00000550285	COPS6	Q7L5N1	327 aa		18.32	■□□□□ 0.52
PDE1B-206	ENST00000550285	CHMP4B	Q9H444	224 aa	Known RBP	18.31	■□□□□ 0.52
PDE1B-206	ENST00000550285	BEND3	Q5T5X7	828 aa		18.31	■□□□□ 0.52
PDE1B-206	ENST00000550285	KSR2	Q6VAB6	950 aa		18.31	■□□□□ 0.52
PDE1B-206	ENST00000550285	DNAJC10	Q8IXB1	793 aa		18.31	■□□□□ 0.52
PDE1B-206	ENST00000550285	USP44	Q9H0E7	712 aa		18.3	■□□□□ 0.52
PDE1B-206	ENST00000550285	BCL11A	Q9H165	835 aa		18.3	■□□□□ 0.52
PDE1B-206	ENST00000550285	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.3	■□□□□ 0.52
PDE1B-206	ENST00000550285	PXDNL	A1KZ92	1463 aa		18.29	■□□□□ 0.52
PDE1B-206	ENST00000550285	PTF1A	Q7RTS3	328 aa		18.29	■□□□□ 0.52
PDE1B-206	ENST00000550285	ATRN	O75882	1429 aa		18.29	■□□□□ 0.52
PDE1B-206	ENST00000550285	RGS3	P49796	1198 aa		18.29	■□□□□ 0.52
PDE1B-206	ENST00000550285	SRCIN1	Q9C0H9	1055 aa		18.29	■□□□□ 0.52
PDE1B-206	ENST00000550285	THSD7A	Q9UPZ6	1657 aa		18.29	■□□□□ 0.52
PDE1B-206	ENST00000550285	ATP10D	Q9P241	1426 aa		18.28	■□□□□ 0.52
PDE1B-206	ENST00000550285	PDZRN3	Q9UPQ7	1066 aa		18.28	■□□□□ 0.52
PDE1B-206	ENST00000550285	CWF19L2	Q2TBE0	894 aa	Known RBP	18.27	■□□□□ 0.52
PDE1B-206	ENST00000550285	QTRT2	Q9H974	415 aa	Known RBP	18.27	■□□□□ 0.52
PDE1B-206	ENST00000550285	TRPC5	Q9UL62	973 aa	Predicted RBP	18.27	■□□□□ 0.52
PDE1B-206	ENST00000550285	CEP85	Q6P2H3	762 aa		18.27	■□□□□ 0.52
PDE1B-206	ENST00000550285	RIC3	Q7Z5B4	369 aa		18.27	■□□□□ 0.52
PDE1B-206	ENST00000550285	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.26	■□□□□ 0.51
PDE1B-206	ENST00000550285	TTLL7	Q6ZT98	887 aa		18.26	■□□□□ 0.51
PDE1B-206	ENST00000550285	DDX58	O95786	925 aa	Known RBP	18.25	■□□□□ 0.51
PDE1B-206	ENST00000550285	ANKRD13D	Q6ZTN6	518 aa		18.25	■□□□□ 0.51
PDE1B-206	ENST00000550285	SMC5	Q8IY18	1101 aa		18.25	■□□□□ 0.51
PDE1B-206	ENST00000550285	VSIG10	Q8N0Z9	540 aa		18.25	■□□□□ 0.51
PDE1B-206	ENST00000550285	ANKRD44	Q8N8A2	993 aa		18.25	■□□□□ 0.51
PDE1B-206	ENST00000550285	LRRFIP2	Q9Y608	721 aa	Known RBP	18.25	■□□□□ 0.51
PDE1B-206	ENST00000550285	GNAI2	P04899	355 aa		18.24	■□□□□ 0.51
PDE1B-206	ENST00000550285	IGKV5-2	P06315	115 aa		18.24	■□□□□ 0.51
PDE1B-206	ENST00000550285	EP400	Q96L91	3159 aa		18.24	■□□□□ 0.51
PDE1B-206	ENST00000550285	GNAI3	P08754	354 aa		18.23	■□□□□ 0.51
PDE1B-206	ENST00000550285	SEPT12	Q8IYM1	358 aa		18.23	■□□□□ 0.51
PDE1B-206	ENST00000550285	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.23	■□□□□ 0.51
PDE1B-206	ENST00000550285	ERBB4	Q15303	1308 aa		18.23	■□□□□ 0.51
PDE1B-206	ENST00000550285	ONECUT3	O60422	494 aa	Predicted RBP	18.23	■□□□□ 0.51
PDE1B-206	ENST00000550285	MYD88	Q99836	296 aa		18.23	■□□□□ 0.51
PDE1B-206	ENST00000550285	CYP19A1	P11511	503 aa	Predicted RBP	18.22	■□□□□ 0.51
PDE1B-206	ENST00000550285	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.22	■□□□□ 0.51
PDE1B-206	ENST00000550285	TJP1	Q07157	1748 aa		18.22	■□□□□ 0.51
PDE1B-206	ENST00000550285	UBTFL1	P0CB47	393 aa	Predicted RBP	18.22	■□□□□ 0.51
PDE1B-206	ENST00000550285	METTL22	Q9BUU2	404 aa	Predicted RBP	18.22	■□□□□ 0.51
PDE1B-206	ENST00000550285	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.22	■□□□□ 0.51
PDE1B-206	ENST00000550285	ARFGEF2	Q9Y6D5	1785 aa		18.21	■□□□□ 0.51
PDE1B-206	ENST00000550285	STARD3NL	O95772	234 aa		18.21	■□□□□ 0.51
PDE1B-206	ENST00000550285	LINS1	Q8NG48	757 aa		18.21	■□□□□ 0.51
PDE1B-206	ENST00000550285	PNMA6E	A0A0J9YXQ4	647 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	ATP5J2-PTCD1	G3V325	749 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	ALDH1L1	O75891	902 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	PDE4A	P27815	886 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	ITPK1	Q13572	414 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	PLBD2	Q8NHP8	589 aa		18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms