RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 ABCC4O15439 1325 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 CEP85Q6P2H3 762 aa13.06□□□□□ -0.32
SMARCC2-208ENST00000550150 HOXC9P31274 260 aa13.06□□□□□ -0.32
SMARCC2-208ENST00000550150 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
SMARCC2-208ENST00000550150 LRSAM1Q6UWE0 723 aa13.06□□□□□ -0.32
SMARCC2-208ENST00000550150 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
SMARCC2-208ENST00000550150 CWC22Q9HCG8 908 aaKnown RBP13.06□□□□□ -0.32
SMARCC2-208ENST00000550150 ZKSCAN5Q9Y2L8 839 aa13.06□□□□□ -0.32
SMARCC2-208ENST00000550150 MSH6P52701 1360 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 SLIT3O75094 1523 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 SBNO1A3KN83 1393 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 USP25Q9UHP3 1055 aa13.05□□□□□ -0.32
SMARCC2-208ENST00000550150 FLT4P35916 1363 aa13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 CCDC39Q9UFE4 941 aa13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 PALD1Q9ULE6 856 aa13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 LTV1Q96GA3 475 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 EYA1Q99502 592 aa13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 TSPY26PQ9H489 355 aa13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
SMARCC2-208ENST00000550150 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 LTBP4Q8N2S1 1624 aa13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 CADPS2Q86UW7 1296 aa13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 TTC12Q9H892 705 aaPredicted RBP13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 HMMRO75330 724 aa13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 GCP02774 474 aa13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 MCCP23508 829 aa13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
SMARCC2-208ENST00000550150 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
SMARCC2-208ENST00000550150 G2E3Q7L622 706 aa13.02□□□□□ -0.32
SMARCC2-208ENST00000550150 RPAP2Q8IXW5 612 aaPredicted RBP13.02□□□□□ -0.33
SMARCC2-208ENST00000550150 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
SMARCC2-208ENST00000550150 ZHX1Q9UKY1 873 aaPredicted RBP13.02□□□□□ -0.33
SMARCC2-208ENST00000550150 FIBPO43427 364 aa13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 AMPHP49418 695 aa13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 PDE1AP54750 535 aa13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 KIAA2012Q0VF49 1180 aa13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 TUBGCP6Q96RT7 1819 aa13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
SMARCC2-208ENST00000550150 COL18A1P39060 1754 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 MBD3O95983 291 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
SMARCC2-208ENST00000550150 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
SMARCC2-208ENST00000550150 SPC24Q8NBT2 197 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 SYAP1Q96A49 352 aaPredicted RBP13□□□□□ -0.33
SMARCC2-208ENST00000550150 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 ZNF853P0CG23 659 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 CLEC17AQ6ZS10 378 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
SMARCC2-208ENST00000550150 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 KDRP35968 1356 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 LMO7Q8WWI1 1683 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 ZNF500O60304 480 aaPredicted RBP12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 PDLIM2Q96JY6 352 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
SMARCC2-208ENST00000550150 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
SMARCC2-208ENST00000550150 SASS6Q6UVJ0 657 aa12.98□□□□□ -0.33
SMARCC2-208ENST00000550150 CNPY2Q9Y2B0 182 aa12.98□□□□□ -0.33
SMARCC2-208ENST00000550150 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
SMARCC2-208ENST00000550150 CBX1P83916 185 aa12.98□□□□□ -0.33
SMARCC2-208ENST00000550150 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 CPA1P15085 419 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 MX1P20591 662 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 UNC5CLQ8IV45 518 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 ROBO1Q9Y6N7 1651 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 IP6K1Q92551 441 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 ESYT1Q9BSJ8 1104 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 LRRCC1Q9C099 1032 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
SMARCC2-208ENST00000550150 HS1BP3Q53T59 392 aa12.96□□□□□ -0.33
SMARCC2-208ENST00000550150 NPHP3Q7Z494 1330 aa12.96□□□□□ -0.33
SMARCC2-208ENST00000550150 PNMA6EA0A0J9YXQ4 647 aa12.96□□□□□ -0.33
SMARCC2-208ENST00000550150 ADCY5O95622 1261 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms