RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
VDR-206ENST00000549336 CPLX1O14810 134 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 PRIM1P49642 420 aaKnown RBP14.09□□□□□ -0.15
VDR-206ENST00000549336 UBE3BQ7Z3V4 1068 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 CHD1LQ86WJ1 897 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 ANKIB1Q9P2G1 1089 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 TULP4Q9NRJ4 1543 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 TRAPPC3LQ5T215 181 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 C8orf58Q8NAV2 365 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
VDR-206ENST00000549336 SLC5A1P13866 664 aa14.08□□□□□ -0.15
VDR-206ENST00000549336 NCOA3Q9Y6Q9 1424 aa14.08□□□□□ -0.16
VDR-206ENST00000549336 ATP5J2-PTCD1G3V325 749 aa14.08□□□□□ -0.16
VDR-206ENST00000549336 UNC5CLQ8IV45 518 aa14.08□□□□□ -0.16
VDR-206ENST00000549336 DLC1Q96QB1 1528 aa14.08□□□□□ -0.16
VDR-206ENST00000549336 LRRFIP2Q9Y608 721 aaKnown RBP14.08□□□□□ -0.16
VDR-206ENST00000549336 RXRBP28702 533 aa14.08□□□□□ -0.16
VDR-206ENST00000549336 NIP7Q9Y221 180 aaKnown RBP eCLIP14.08□□□□□ -0.16
VDR-206ENST00000549336 ERBB3P21860 1342 aa14.08□□□□□ -0.16
VDR-206ENST00000549336 GLRX3O76003 335 aaKnown RBP14.07□□□□□ -0.16
VDR-206ENST00000549336 TMOD2Q9NZR1 351 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 CHL1O00533 1208 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 TPRNQ4KMQ1 711 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 LDHAL6AQ6ZMR3 332 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 NFXL1Q6ZNB6 911 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 ATP6V1DQ9Y5K8 247 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 PIK3C2BO00750 1634 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 PHKG2P15735 406 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 UTP14AQ9BVJ6 771 aaKnown RBP14.07□□□□□ -0.16
VDR-206ENST00000549336 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 LRP2BPQ9P2M1 347 aa14.07□□□□□ -0.16
VDR-206ENST00000549336 VAMP4O75379 141 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 ANXA1P04083 346 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
VDR-206ENST00000549336 TRIM29Q14134 588 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 NOL8Q76FK4 1167 aaKnown RBP14.06□□□□□ -0.16
VDR-206ENST00000549336 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 GNPATO15228 680 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 PARP10Q53GL7 1025 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 CDC42BPGQ6DT37 1551 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 FAM196AQ6ZSG2 479 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 IGSF1Q8N6C5 1336 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 JCADQ9P266 1359 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 ADAMTS13Q76LX8 1427 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 RAD21O60216 631 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 FLAD1Q8NFF5 587 aa14.06□□□□□ -0.16
VDR-206ENST00000549336 H3BQV1 296 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 GRM8O00222 908 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 MARCH6O60337 910 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 IFFO2Q5TF58 517 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 SLF2Q8IX21 1173 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 EXOC6BQ9Y2D4 811 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 TRPM1Q7Z4N2 1603 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 MADDQ8WXG6 1647 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
VDR-206ENST00000549336 NEXMIFQ5QGS0 1516 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 DHX16O60231 1041 aaKnown RBP14.05□□□□□ -0.16
VDR-206ENST00000549336 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 RAI14Q9P0K7 980 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 BLMP54132 1417 aaPredicted RBP14.05□□□□□ -0.16
VDR-206ENST00000549336 PREX1Q8TCU6 1659 aa14.05□□□□□ -0.16
VDR-206ENST00000549336 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
VDR-206ENST00000549336 CTNNA3Q9UI47 895 aa14.04□□□□□ -0.16
VDR-206ENST00000549336 CCDC87Q9NVE4 849 aa14.04□□□□□ -0.16
VDR-206ENST00000549336 RBM5P52756 815 aaKnown RBP eCLIP14.04□□□□□ -0.16
VDR-206ENST00000549336 APBA3O96018 575 aa14.03□□□□□ -0.16
VDR-206ENST00000549336 LGR6Q9HBX8 967 aa14.03□□□□□ -0.16
VDR-206ENST00000549336 ANKRD18AQ8IVF6 992 aa14.03□□□□□ -0.16
VDR-206ENST00000549336 C6orf229H3BNL8 230 aa14.03□□□□□ -0.16
VDR-206ENST00000549336 ZNF622Q969S3 477 aaKnown RBP eCLIP14.03□□□□□ -0.16
VDR-206ENST00000549336 FRMPD1Q5SYB0 1578 aa14.03□□□□□ -0.16
VDR-206ENST00000549336 ERBB4Q15303 1308 aa14.03□□□□□ -0.16
VDR-206ENST00000549336 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.16
VDR-206ENST00000549336 SPATA31A6Q5VVP1 1343 aa14.02□□□□□ -0.16
VDR-206ENST00000549336 DIP2AQ14689 1571 aa14.02□□□□□ -0.16
VDR-206ENST00000549336 PLBD2Q8NHP8 589 aa14.02□□□□□ -0.16
VDR-206ENST00000549336 SYAP1Q96A49 352 aaPredicted RBP14.02□□□□□ -0.16
VDR-206ENST00000549336 FER1L4A9Z1Z3 1794 aa14.02□□□□□ -0.17
VDR-206ENST00000549336 RICTORQ6R327 1708 aa14.02□□□□□ -0.17
VDR-206ENST00000549336 MAP3K12Q12852 859 aa14.02□□□□□ -0.17
VDR-206ENST00000549336 USP31Q70CQ4 1352 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 MX1P20591 662 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 VWDEQ8N2E2 1590 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 C22orf23Q9BZE7 217 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 SLKQ9H2G2 1235 aaPredicted RBP14.01□□□□□ -0.17
VDR-206ENST00000549336 ABCF2Q9UG63 623 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 IDH1O75874 414 aaKnown RBP14.01□□□□□ -0.17
VDR-206ENST00000549336 SF3A1Q15459 793 aaKnown RBP14.01□□□□□ -0.17
VDR-206ENST00000549336 RASSF8Q8NHQ8 419 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
VDR-206ENST00000549336 GOLGA6L6A8MZA4 724 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
VDR-206ENST00000549336 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
VDR-206ENST00000549336 LDHCP07864 332 aa14□□□□□ -0.17
VDR-206ENST00000549336 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
VDR-206ENST00000549336 MCM2P49736 904 aa14□□□□□ -0.17
VDR-206ENST00000549336 KRT27Q7Z3Y8 459 aa14□□□□□ -0.17
VDR-206ENST00000549336 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms